Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

V5T

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NAPC2sing1.38Å1.37Å
C2N3doub1.32Å1.38ÅAromatic
C2N1sing1.32Å1.38ÅAromatic
N3C4sing1.33Å1.35ÅAromatic
N1C6doub1.32Å1.41ÅAromatic
CABCAAdoub1.37Å1.39ÅAromatic
CABCACsing1.39Å1.41ÅAromatic
CAACAFsing1.39Å1.36ÅAromatic
C4CAIsing1.48Å1.36Å
C4C5doub1.40Å1.40ÅAromatic
CACCADdoub1.38Å1.39ÅAromatic
C6C5sing1.38Å1.42ÅAromatic
CAFCAIsing1.47Å1.39ÅAromatic
CAFCAEdoub1.40Å1.35ÅAromatic
CAICAHdoub1.36Å1.34ÅAromatic
CADCAEsing1.39Å1.34ÅAromatic
CAENAGsing1.38Å1.37ÅAromatic
CAHNAGsing1.36Å1.34ÅAromatic
C5H1sing1.08Å1.08Å
C6H2sing1.08Å1.08Å
CADH3sing1.08Å1.08Å
CACH4sing1.08Å1.08Å
CABH5sing1.08Å1.08Å
CAAH6sing1.08Å1.08Å
NAGH7sing0.97Å1.00Å
CAHH8sing1.08Å1.08Å
NAPH9sing0.97Å1.00Å
NAPH10sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NAPC2N3117.1°119.1°
NAPC2N1120.5°119.2°
C2NAPH9109.5°120.0°
C2NAPH10109.4°119.9°
N3C2N1122.3°121.7°
C2N3C4124.3°120.5°
C2N1C6115.2°121.0°
N3C4CAI122.5°120.5°
N3C4C5115.6°118.9°
N1C6C5121.5°119.3°
N1C6H2119.2°120.4°
CAACABCAC118.0°120.5°
CABCAACAF124.7°119.7°
CAACABH5121.0°119.7°
CABCAAH6117.7°120.1°
CABCACCAD116.3°120.6°
CABCACH4121.9°119.7°
CACCABH5121.0°119.7°
CAACAFCAI137.2°134.0°
CAACAFCAE115.4°120.1°
CAFCAAH6117.6°120.2°
CAIC4C5121.8°120.6°
C4CAICAF133.7°126.7°
C4CAICAH117.3°126.6°
C4C5C6121.0°118.5°
C4C5H1119.5°120.7°
CACCADCAE121.9°119.8°
CACCADH3119.1°120.0°
CADCACH4121.8°119.7°
C6C5H1119.5°120.8°
C5C6H2119.2°120.3°
CAICAFCAE107.4°106.0°
CAFCAICAH109.0°106.6°
CAFCAECAD123.6°119.3°
CAFCAENAG106.2°107.4°
CAICAHNAG106.6°109.8°
CAICAHH8126.7°125.1°
CADCAENAG130.2°133.3°
CAECADH3119.0°120.2°
CAENAGCAH110.9°110.2°
CAENAGH7124.6°124.9°
CAHNAGH7124.6°124.9°
NAGCAHH8126.7°125.1°
H9NAPH10109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NAPC2N3N1177.2°179.5°
NAPC2N3C4177.7°180.0°
NAPC2N1C6177.2°179.8°
C2NAPH9H10120.0°179.9°
N3C2N1C60.1°0.3°
C2N3C4CAI179.9°179.7°
C2N3C4C50.7°0.5°
N3C2NAPH90.0°0.0°
N3C2NAPH10120.0°180.0°
N1C2N3C40.5°0.5°
C2N1C6C50.0°0.0°
C2N1C6H2179.9°180.0°
N1C2NAPH9177.2°179.5°
N1C2NAPH1062.7°0.5°
N3C4CAIC5179.2°179.8°
N3C4C5C60.6°0.2°
N3C4CAICAF2.9°0.3°
N3C4CAICAH179.6°179.8°
N3C4C5H1179.4°179.7°
N1C6C5C40.3°0.0°
N1C6C5H2180.0°180.0°
N1C6C5H1179.7°180.0°
CAACABCACH5180.0°180.0°
CABCAACAFH6180.0°179.9°
CAACABCACCAD2.6°0.0°
CABCAACAFCAI178.2°180.0°
CABCAACAFCAE2.4°0.0°
CAACABCACH4177.4°180.0°
CACCABCAACAF3.4°0.0°
CABCACCADH4180.0°180.0°
CABCACCADCAE1.3°0.0°
CABCACCADH3178.7°179.8°
CACCABCAAH6176.6°180.0°
CAACAFCAIC40.8°0.0°
CAACAFCAICAE179.4°180.0°
CAACAFCAICAH177.7°179.9°
CAACAFCAECAD0.9°0.0°
CAACAFCAENAG178.8°179.8°
CAFCAACABH5176.6°180.0°
CAIC4C5C6179.8°180.0°
C4CAICAFCAH176.9°179.9°
C4CAICAFCAE178.6°180.0°
C4CAICAHNAG179.5°179.9°
CAIC4C5H10.2°0.0°
C4CAICAHH80.5°0.0°
C4C5C6H1180.0°180.0°
C5C4CAICAF176.2°179.9°
C5C4CAICAH0.5°0.1°
C4C5C6H2179.8°180.0°
CACCADCAECAF0.5°0.0°
CACCADCAEH3180.0°179.8°
CACCADCAENAG179.2°179.7°
CADCACCABH5177.4°180.0°
CAICAFCAECAD179.5°180.0°
CAICAFCAENAG0.7°0.2°
CAFCAICAHNAG2.0°0.0°
CAICAFCAAH61.8°0.1°
CAFCAICAHH8178.0°179.9°
CAECAFCAICAH1.7°0.1°
CAFCAECADNAG179.7°179.7°
CAFCAENAGCAH0.5°0.3°
CAFCAECADH3179.6°179.7°
CAECAFCAAH6177.5°179.9°
CAFCAENAGH7179.5°179.7°
CAICAHNAGCAE1.6°0.2°
CAICAHNAGH8180.0°179.8°
CAICAHNAGH7178.4°179.8°
CADCAENAGCAH179.2°180.0°
CAECADCACH4178.7°180.0°
CADCAENAGH70.8°0.0°
CAENAGCAHH7180.0°180.0°
NAGCAECADH30.7°0.0°
CAENAGCAHH8178.4°180.0°
H1C5C6H20.2°0.0°
H3CADCACH41.3°0.3°
H4CACCABH52.6°0.0°
H5CABCAAH63.4°0.1°
H7NAGCAHH81.6°0.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon