Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

UPO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C01O02sing1.43Å1.37Å
O02C03sing1.36Å1.36Å
C04C03doub1.39Å1.39ÅAromatic
C04C05sing1.38Å1.39ÅAromatic
C03C29sing1.39Å1.39ÅAromatic
C05C06doub1.38Å1.39ÅAromatic
C29C07doub1.39Å1.38ÅAromatic
C06C07sing1.39Å1.40ÅAromatic
C07C08sing1.48Å1.46Å
C08C09doub1.39Å1.39ÅAromatic
C08N28sing1.33Å1.35ÅAromatic
C09C10sing1.39Å1.40ÅAromatic
N28C26doub1.32Å1.39ÅAromatic
C12N11sing1.47Å1.52Å
C12C13sing1.53Å1.56Å
C10N11sing1.39Å1.49Å
C10N25doub1.33Å1.37ÅAromatic
C26N25sing1.32Å1.40ÅAromatic
C26N27sing1.38Å1.37Å
N11C24sing1.47Å1.45Å
C13C14sing1.51Å1.48Å
C24C23sing1.51Å1.51Å
C14C23doub1.38Å1.39ÅAromatic
C14C15sing1.39Å1.40ÅAromatic
C23C22sing1.39Å1.38ÅAromatic
C15C16doub1.38Å1.39ÅAromatic
C22C19doub1.38Å1.39ÅAromatic
C16C19sing1.39Å1.41ÅAromatic
C16O17sing1.36Å1.36Å
C18O17sing1.43Å1.39Å
C19O20sing1.36Å1.36Å
O20C21sing1.43Å1.45Å
C13H1sing1.09Å1.10Å
C13H2sing1.09Å1.10Å
C15H3sing1.08Å1.08Å
C21H4sing1.09Å1.10Å
C21H5sing1.09Å1.10Å
C21H6sing1.09Å1.10Å
C22H7sing1.08Å1.08Å
C24H8sing1.09Å1.10Å
C24H9sing1.09Å1.10Å
C01H10sing1.09Å1.10Å
C01H11sing1.09Å1.10Å
C01H12sing1.09Å1.10Å
C04H13sing1.08Å1.08Å
C05H14sing1.08Å1.08Å
C06H15sing1.08Å1.08Å
C09H16sing1.08Å1.08Å
C12H17sing1.09Å1.10Å
C12H18sing1.09Å1.10Å
C18H19sing1.09Å1.10Å
C18H20sing1.09Å1.10Å
C18H21sing1.09Å1.10Å
C29H22sing1.08Å1.08Å
N27H23sing0.97Å1.00Å
N27H24sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C01O02C03114.4°117.0°
O02C01H10109.5°109.5°
O02C01H11109.5°109.5°
O02C01H12109.5°109.4°
O02C03C04120.1°120.0°
O02C03C29118.0°120.0°
C03C04C05118.0°120.2°
C04C03C29122.0°120.0°
C03C04H13121.0°119.9°
C04C05C06120.5°120.2°
C05C04H13121.0°119.9°
C04C05H14119.7°120.0°
C03C29C07119.7°119.8°
C03C29H22120.1°120.1°
C05C06C07120.8°120.0°
C06C05H14119.7°119.9°
C05C06H15119.6°120.0°
C29C07C06119.0°119.8°
C29C07C08121.8°120.1°
C07C29H22120.1°120.1°
C06C07C08119.2°120.1°
C07C06H15119.6°120.0°
C07C08C09120.1°120.5°
C07C08N28117.3°120.5°
C09C08N28122.6°119.1°
C08C09C10120.2°118.4°
C08C09H16119.9°120.8°
C08N28C26114.4°120.8°
C09C10N11116.5°120.5°
C09C10N25120.6°119.1°
C10C09H16119.9°120.8°
N28C26N25127.2°121.7°
N28C26N27114.1°119.1°
N11C12C13113.2°108.5°
C12N11C10121.9°111.0°
C12N11C24111.8°110.3°
N11C12H17108.5°109.7°
N11C12H18108.5°109.6°
C12C13C14117.6°110.0°
C12C13H1107.4°109.3°
C12C13H2107.4°109.3°
C13C12H17108.5°109.7°
C13C12H18108.5°109.6°
N11C10N25123.0°120.5°
C10N11C24119.8°111.0°
C10N25C26115.0°120.9°
N25C26N27118.7°119.1°
C26N27H23109.5°120.0°
C26N27H24109.5°119.9°
N11C24C23110.3°110.5°
N11C24H8109.3°109.2°
N11C24H9109.3°109.2°
C13C14C23119.4°121.6°
C13C14C15120.2°118.4°
C14C13H1107.4°109.4°
C14C13H2107.4°109.4°
C24C23C14120.9°121.9°
C24C23C22119.8°118.3°
C23C24H8109.3°109.3°
C23C24H9109.3°109.3°
C23C14C15120.4°120.0°
C14C23C22119.2°119.8°
C14C15C16120.5°120.4°
C14C15H3119.8°119.8°
C23C22C19121.4°120.4°
C23C22H7119.3°119.8°
C15C16C19118.8°119.7°
C15C16O17123.2°120.2°
C16C15H3119.7°119.8°
C22C19C16119.7°119.7°
C22C19O20120.8°120.2°
C19C22H7119.3°119.7°
C19C16O17118.0°120.2°
C16C19O20119.5°120.1°
C16O17C18118.9°117.0°
O17C18H19109.5°109.4°
O17C18H20109.5°109.4°
O17C18H21109.5°109.4°
C19O20C21113.0°117.0°
O20C21H4109.5°109.5°
O20C21H5109.5°109.5°
O20C21H6109.5°109.5°
H1C13H2109.5°109.4°
H4C21H5109.5°109.4°
H4C21H6109.5°109.5°
H5C21H6109.4°109.4°
H8C24H9109.5°109.3°
H10C01H11109.4°109.5°
H10C01H12109.5°109.5°
H11C01H12109.5°109.5°
H17C12H18109.5°109.8°
H19C18H20109.4°109.5°
H19C18H21109.5°109.5°
H20C18H21109.5°109.5°
H23N27H24109.5°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C01O02C03C04111.5°0.3°
C01O02C03C2969.0°180.0°
O02C01H10H11120.0°120.0°
O02C01H10H12120.0°120.0°
O02C01H11H12120.0°120.0°
O02C03C04C29179.5°179.7°
O02C03C04C05179.6°179.7°
O02C03C29C07179.5°179.7°
C03O02C01H10180.0°60.0°
C03O02C01H1160.0°60.0°
C03O02C01H1260.0°180.0°
O02C03C04H130.4°0.2°
O02C03C29H220.5°0.2°
C03C04C05H13180.0°179.9°
C03C04C05C060.0°0.0°
C04C03C29C070.0°0.0°
C03C04C05H14180.0°179.9°
C04C03C29H22180.0°180.0°
C05C04C03C290.1°0.0°
C04C05C06H14180.0°179.9°
C04C05C06C070.1°0.0°
C04C05C06H15179.9°179.9°
C03C29C07H22180.0°179.9°
C03C29C07C060.1°0.0°
C03C29C07C08179.8°180.0°
C29C03C04H13179.9°180.0°
C05C06C07C290.2°0.0°
C05C06C07H15180.0°179.9°
C05C06C07C08179.8°180.0°
C06C05C04H13180.0°180.0°
C29C07C06C08179.9°180.0°
C29C07C08C09146.8°175.0°
C29C07C08N2834.7°5.0°
C29C07C06H15179.8°179.9°
C06C07C08C0933.2°4.9°
C06C07C08N28145.2°175.1°
C07C06C05H14179.9°179.9°
C06C07C29H22179.9°179.9°
C07C08C09N28178.4°180.0°
C07C08C09C10178.7°180.0°
C07C08N28C26179.1°179.8°
C08C07C06H150.2°0.1°
C07C08C09H161.3°0.0°
C08C07C29H220.2°0.0°
C08C09C10H16180.0°180.0°
C09C08N28C260.6°0.2°
C08C09C10N11179.4°180.0°
C08C09C10N250.5°0.3°
N28C08C09C100.3°0.0°
C08N28C26N250.3°0.3°
C08N28C26N27179.4°179.7°
N28C08C09H16179.7°180.0°
C09C10N11C1223.4°179.7°
C09C10N11N25178.9°179.7°
C09C10N25C260.8°0.3°
C09C10N11C24172.7°56.7°
N28C26N25C100.4°0.0°
N28C26N25N27179.7°180.0°
N28C26N27H230.0°180.0°
N28C26N27H24120.0°0.0°
N11C12C13H17120.5°119.8°
N11C12C13H18120.5°119.6°
C12N11C10C24149.3°123.0°
C12N11C10N25157.7°0.1°
N11C12C13C147.7°50.3°
C12N11C24C2359.5°52.5°
N11C12C13H1113.5°170.5°
N11C12C13H2128.9°69.8°
C12N11C24H860.6°67.8°
C12N11C24H9179.6°172.7°
N11C12H17H18118.3°120.4°
C13C12N11C10106.0°165.3°
C13C12N11C2445.5°71.3°
C12C13C14H1121.1°120.1°
C12C13C14H2121.2°120.1°
C12C13C14C2315.3°16.8°
C12C13C14C15165.7°163.3°
C12C13H1H2116.3°119.7°
C13C12H17H18118.3°120.5°
N11C10N25C26179.6°180.0°
C10N11C24C2392.7°176.0°
C10N11C24H8147.2°55.7°
C10N11C24H927.5°63.8°
N11C10C09H160.6°0.0°
C10N11C12H1714.5°45.5°
C10N11C12H18133.4°75.1°
C10N25C26N27179.9°180.0°
N25C10N11C248.4°123.0°
N25C10C09H16179.6°179.7°
N25C26N27H23179.7°0.0°
N25C26N27H2460.3°180.0°
C26N27H23H24120.0°180.0°
N11C24C23H8120.1°120.3°
N11C24C23H9120.1°120.2°
N11C24C23C1437.4°17.4°
N11C24C23C22142.4°162.6°
N11C24H8H9119.6°119.5°
C24N11C12H17166.0°169.0°
C24N11C12H1875.0°48.4°
C13C14C23C240.7°0.3°
C13C14C23C15179.0°179.9°
C13C14C23C22179.5°179.7°
C13C14C15C16179.7°179.8°
C14C13H1H2116.3°119.8°
C13C14C15H30.3°0.2°
C14C13C12H17128.2°170.1°
C14C13C12H18112.8°69.3°
C24C23C14C22179.8°180.0°
C24C23C14C15179.7°179.8°
C24C23C22C19179.5°179.8°
C24C23C22H70.5°0.1°
C23C24H8H9119.6°119.5°
C23C14C15C160.7°0.2°
C14C23C22C190.6°0.1°
C23C14C13H1136.5°136.9°
C23C14C13H2105.9°103.3°
C23C14C15H3179.3°179.8°
C14C23C22H7179.4°179.9°
C14C23C24H882.7°102.8°
C14C23C24H9157.5°137.7°
C15C14C23C220.5°0.2°
C14C15C16H3180.0°180.0°
C14C15C16C191.1°0.1°
C14C15C16O17179.7°180.0°
C15C14C13H144.5°43.2°
C15C14C13H273.1°76.7°
C23C22C19H7180.0°179.9°
C23C22C19C161.0°0.0°
C23C22C19O20178.8°180.0°
C22C23C24H897.5°77.1°
C22C23C24H922.3°42.4°
C15C16C19C221.2°0.0°
C15C16C19O17179.3°179.9°
C15C16O17C1823.1°0.0°
C15C16C19O20179.0°179.9°
C22C19C16O20177.8°180.0°
C22C19C16O17179.5°179.9°
C22C19O20C21103.0°0.0°
C19C16O17C18157.7°180.0°
C16C19O20C2174.8°180.0°
C19C16C15H3178.9°180.0°
C16C19C22H7179.0°179.9°
O17C16C19O201.7°0.1°
O17C16C15H30.3°0.0°
C16O17C18H19180.0°60.0°
C16O17C18H2060.0°59.9°
C16O17C18H2160.0°180.0°
O17C18H19H20120.0°119.9°
O17C18H19H21120.0°119.9°
O17C18H20H21120.0°120.0°
C19O20C21H4180.0°60.0°
C19O20C21H560.0°60.0°
C19O20C21H660.0°180.0°
O20C19C22H71.2°0.1°
O20C21H4H5120.0°120.0°
O20C21H4H6120.0°120.0°
O20C21H5H6120.0°120.0°
H1C13C12H177.1°69.8°
H1C13C12H18126.0°50.9°
H2C13C12H17110.6°49.9°
H2C13C12H188.3°170.6°
H4C21H5H6120.0°119.9°
H10C01H11H12120.0°120.0°
H13C04C05H140.0°0.2°
H14C05C06H150.1°0.0°
H19C18H20H21120.0°120.1°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon