Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

UDO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAMCAOsing1.38Å1.39ÅAromatic
CAMCBAdoub1.39Å1.39ÅAromatic
CAOCBBdoub1.38Å1.39ÅAromatic
CBBCBFsing1.51Å1.39Å
CBBCAPsing1.38Å1.39ÅAromatic
CBFFACsing1.40Å1.33Å
CBFFADsing1.40Å1.33Å
CBFFABsing1.40Å1.33Å
CAPCANdoub1.38Å1.39ÅAromatic
CANCBAsing1.39Å1.39ÅAromatic
CBANBEsing1.40Å1.34Å
NBECAUsing1.47Å1.48Å
NBECATsing1.47Å1.47Å
CAUCASsing1.53Å1.53Å
CASNBDsing1.47Å1.48Å
CATCARsing1.53Å1.52Å
CARNBDsing1.47Å1.48Å
NBDCAWsing1.35Å1.34Å
CAWOAAdoub1.21Å1.22Å
CAWCBCsing1.51Å1.53Å
CBCCAYsing1.51Å1.39Å
CBCCAZsing1.51Å1.39Å
CAYCAKsing1.38Å1.39ÅAromatic
CAYCALdoub1.38Å1.39ÅAromatic
CAKCAIdoub1.38Å1.39ÅAromatic
CAICAXsing1.38Å1.39ÅAromatic
CAXCLAsing1.74Å1.72Å
CAXCAJdoub1.38Å1.39ÅAromatic
CAJCALsing1.38Å1.39ÅAromatic
CAZCAHsing1.39Å1.39ÅAromatic
CAZCAQdoub1.38Å1.38ÅAromatic
CAHCAFdoub1.39Å1.39ÅAromatic
CAFCAGsing1.38Å1.38ÅAromatic
CAGNAVdoub1.32Å1.39ÅAromatic
NAVCAQsing1.32Å1.39ÅAromatic
CAMHAMsing1.08Å1.08Å
CAOHAOsing1.08Å1.08Å
CAPHAPsing1.08Å1.08Å
CANHANsing1.08Å1.08Å
CAUHAU1sing1.09Å1.10Å
CAUHAU2sing1.09Å1.10Å
CATHAT1sing1.09Å1.10Å
CATHAT2sing1.09Å1.10Å
CASHAS1sing1.09Å1.10Å
CASHAS2sing1.09Å1.10Å
CARHAR1sing1.09Å1.10Å
CARHAR2sing1.09Å1.10Å
CBCHBCsing1.09Å1.10Å
CAKHAKsing1.08Å1.08Å
CALHALsing1.08Å1.08Å
CAIHAIsing1.08Å1.08Å
CAJHAJsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAQHAQsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
CAGHAGsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAOCAMCBA120.6°119.9°
CAMCAOCBB120.3°120.0°
CAOCAMHAM119.7°120.0°
CAMCAOHAO119.8°120.0°
CAMCBACAN119.7°119.9°
CAMCBANBE118.1°120.1°
CBACAMHAM119.7°120.0°
CAOCBBCBF120.2°119.9°
CAOCBBCAP118.8°120.2°
CBBCAOHAO119.8°120.0°
CBFCBBCAP121.0°119.9°
CBBCBFFAC110.0°109.5°
CBBCBFFAD109.8°109.5°
CBBCBFFAB109.1°109.5°
CBBCAPCAN121.2°120.1°
CBBCAPHAP119.4°119.9°
FACCBFFAD108.7°109.4°
FACCBFFAB109.6°109.4°
FADCBFFAB109.5°109.5°
CAPCANCBA119.4°119.9°
CANCAPHAP119.4°120.0°
CAPCANHAN120.3°120.0°
CANCBANBE122.2°120.0°
CBACANHAN120.3°120.1°
CBANBECAU121.8°111.0°
CBANBECAT117.6°111.0°
CAUNBECAT120.6°111.3°
NBECAUCAS112.1°109.4°
NBECAUHAU1108.8°109.5°
NBECAUHAU2108.8°109.5°
NBECATCAR109.3°109.3°
NBECATHAT1109.5°109.5°
NBECATHAT2109.5°109.5°
CAUCASNBD111.5°108.5°
CASCAUHAU1108.8°109.5°
CASCAUHAU2108.8°109.5°
CAUCASHAS1109.0°109.6°
CAUCASHAS2109.0°109.6°
CASNBDCAR120.5°118.3°
CASNBDCAW122.2°120.8°
NBDCASHAS1109.0°109.7°
NBDCASHAS2109.0°109.6°
CATCARNBD111.3°108.5°
CARCATHAT1109.5°109.5°
CARCATHAT2109.5°109.5°
CATCARHAR1109.0°109.6°
CATCARHAR2109.0°109.7°
CARNBDCAW117.3°120.9°
NBDCARHAR1109.0°109.6°
NBDCARHAR2109.0°109.6°
NBDCAWOAA122.4°120.0°
NBDCAWCBC117.9°120.0°
OAACAWCBC119.6°120.0°
CAWCBCCAY109.1°109.5°
CAWCBCCAZ111.9°109.5°
CAWCBCHBC107.0°109.5°
CAYCBCCAZ111.1°109.4°
CBCCAYCAK118.3°120.0°
CBCCAYCAL122.9°120.0°
CAYCBCHBC108.7°109.5°
CBCCAZCAH124.3°120.4°
CBCCAZCAQ116.3°120.4°
CAZCBCHBC108.8°109.5°
CAKCAYCAL118.9°120.1°
CAYCAKCAI120.8°120.0°
CAYCAKHAK119.6°120.0°
CAYCALCAJ120.5°120.0°
CAYCALHAL119.7°120.0°
CAKCAICAX120.2°120.0°
CAICAKHAK119.6°120.0°
CAKCAIHAI119.9°120.0°
CAICAXCLA119.7°120.0°
CAICAXCAJ119.2°120.0°
CAXCAIHAI119.9°120.0°
CLACAXCAJ121.1°120.0°
CAXCAJCAL120.4°119.9°
CAXCAJHAJ119.8°120.0°
CAJCALHAL119.7°120.0°
CALCAJHAJ119.8°120.0°
CAHCAZCAQ119.4°119.2°
CAZCAHCAF121.1°118.4°
CAZCAHHAH119.4°120.8°
CAZCAQNAV119.7°120.8°
CAZCAQHAQ120.1°119.7°
CAHCAFCAG119.6°119.1°
CAFCAHHAH119.5°120.8°
CAHCAFHAF120.2°120.4°
CAFCAGNAV119.5°120.8°
CAGCAFHAF120.2°120.5°
CAFCAGHAG120.3°119.6°
CAGNAVCAQ120.6°121.7°
NAVCAGHAG120.3°119.6°
NAVCAQHAQ120.2°119.6°
HAU1CAUHAU2109.5°109.5°
HAT1CATHAT2109.5°109.5°
HAS1CASHAS2109.5°109.8°
HAR1CARHAR2109.5°109.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAOCAMCBAHAM180.0°179.8°
CAMCAOCBBHAO180.0°179.9°
CAMCAOCBBCBF179.8°180.0°
CAMCAOCBBCAP0.2°0.1°
CAOCAMCBACAN0.7°0.0°
CAOCAMCBANBE179.2°180.0°
CBACAMCAOCBB0.2°0.0°
CAMCBACANCAP0.8°0.0°
CAMCBACANNBE178.5°180.0°
CAMCBANBECAU127.6°180.0°
CAMCBANBECAT50.9°55.7°
CBACAMCAOHAO179.9°179.9°
CAMCBACANHAN179.2°180.0°
CAOCBBCBFCAP180.0°179.9°
CAOCBBCBFFAC30.8°90.0°
CAOCBBCBFFAD88.9°150.1°
CAOCBBCBFFAB151.0°30.0°
CAOCBBCAPCAN0.0°0.1°
CBBCAOCAMHAM179.9°179.8°
CAOCBBCAPHAP180.0°179.9°
CBBCBFFACFAD120.3°120.0°
CBBCBFFACFAB120.0°120.0°
CBBCBFFADFAB119.9°120.0°
CBFCBBCAPCAN180.0°180.0°
CBFCBBCAOHAO0.2°0.1°
CBFCBBCAPHAP0.1°0.0°
CAPCBBCBFFAC149.2°90.0°
CAPCBBCBFFAD91.1°30.0°
CAPCBBCBFFAB29.0°150.0°
CBBCAPCANHAP180.0°180.0°
CBBCAPCANCBA0.5°0.0°
CAPCBBCAOHAO179.8°180.0°
CBBCAPCANHAN179.5°179.9°
FACCBFFADFAB119.7°120.0°
CAPCANCBAHAN180.0°180.0°
CAPCANCBANBE179.3°180.0°
CANCBANBECAU54.0°0.0°
CANCBANBECAT127.6°124.3°
CANCBACAMHAM179.3°179.7°
CBACANCAPHAP179.5°180.0°
CBANBECAUCAT178.4°124.2°
CBANBECAUCAS169.1°172.7°
CBANBECATCAR141.1°172.7°
NBECBACAMHAM0.8°0.2°
NBECBACANHAN0.7°0.1°
CBANBECAUHAU170.6°67.3°
CBANBECAUHAU248.7°52.8°
CBANBECATHAT199.0°52.7°
CBANBECATHAT221.1°67.3°
NBECAUCASHAU1120.4°120.0°
NBECAUCASHAU2120.4°120.0°
NBECAUCASNBD45.7°53.8°
CAUNBECATCAR40.5°63.1°
NBECAUHAU1HAU2118.8°120.1°
CAUNBECATHAT179.5°176.9°
CAUNBECATHAT2160.5°56.9°
NBECAUCASHAS1166.0°173.5°
NBECAUCASHAS274.6°65.9°
CATNBECAUCAS9.3°63.1°
NBECATCARHAT1120.0°120.0°
NBECATCARHAT2120.0°120.0°
NBECATCARNBD53.1°53.8°
CATNBECAUHAU1111.1°56.9°
CATNBECAUHAU2129.7°176.9°
NBECATHAT1HAT2120.1°120.0°
NBECATCARHAR1173.4°65.9°
NBECATCARHAR267.1°173.5°
CAUCASNBDHAS1120.3°119.7°
CAUCASNBDHAS2120.3°119.7°
CAUCASNBDCAR32.5°51.2°
CAUCASNBDCAW148.0°128.8°
CASCAUHAU1HAU2118.8°120.0°
CAUCASHAS1HAS2119.1°120.5°
CASNBDCARCAT17.6°51.2°
CASNBDCARCAW179.6°180.0°
CASNBDCAWOAA180.0°0.0°
CASNBDCAWCBC0.7°180.0°
NBDCASCAUHAU174.7°66.2°
NBDCASCAUHAU2166.0°173.8°
NBDCASHAS1HAS2119.1°120.5°
CASNBDCARHAR1137.9°68.5°
CASNBDCARHAR2102.7°170.9°
CATCARNBDHAR1120.3°119.7°
CATCARNBDHAR2120.3°119.8°
CATCARNBDCAW162.0°128.8°
CARCATHAT1HAT2120.1°120.1°
CATCARHAR1HAR2119.1°120.5°
CARNBDCAWOAA0.5°180.0°
CARNBDCAWCBC179.7°0.1°
NBDCARCATHAT166.8°173.8°
NBDCARCATHAT2173.1°66.1°
CARNBDCASHAS1152.8°170.9°
CARNBDCASHAS287.9°68.5°
NBDCARHAR1HAR2119.2°120.5°
NBDCAWOAACBC179.3°179.9°
NBDCAWCBCCAY144.4°180.0°
NBDCAWCBCCAZ92.2°60.0°
CAWNBDCASHAS127.7°9.1°
CAWNBDCASHAS291.7°111.5°
CAWNBDCARHAR141.7°111.5°
CAWNBDCARHAR277.8°9.0°
NBDCAWCBCHBC26.9°60.0°
OAACAWCBCCAY36.3°0.0°
OAACAWCBCCAZ87.1°119.9°
OAACAWCBCHBC153.8°120.0°
CAWCBCCAYCAZ123.9°120.0°
CAWCBCCAYHBC116.4°120.0°
CAWCBCCAZHBC118.0°120.0°
CAWCBCCAYCAK83.6°125.0°
CAWCBCCAYCAL94.9°54.8°
CAWCBCCAZCAH7.6°130.4°
CAWCBCCAZCAQ171.8°49.8°
CAYCBCCAZHBC119.7°120.0°
CBCCAYCAKCAL178.5°179.7°
CBCCAYCAKCAI179.5°180.0°
CBCCAYCALCAJ179.4°179.8°
CAYCBCCAZCAH114.7°109.6°
CAYCBCCAZCAQ65.9°70.2°
CBCCAYCAKHAK0.6°0.0°
CBCCAYCALHAL0.6°0.0°
CAZCBCCAYCAK152.5°115.0°
CAZCBCCAYCAL29.0°65.2°
CBCCAZCAHCAQ179.4°179.7°
CBCCAZCAHCAF179.7°180.0°
CBCCAZCAQNAV179.5°179.7°
CBCCAZCAHHAH0.3°0.0°
CBCCAZCAQHAQ0.5°0.0°
CAYCAKCAIHAK180.0°179.9°
CAYCAKCAICAX0.7°0.0°
CAKCAYCALCAJ1.0°0.5°
CAKCAYCBCHBC32.8°5.0°
CAKCAYCALHAL179.1°179.7°
CAYCAKCAIHAI179.3°179.9°
CALCAYCAKCAI0.9°0.2°
CAYCALCAJCAX0.7°0.5°
CAYCALCAJHAL180.0°179.8°
CALCAYCBCHBC148.7°174.8°
CALCAYCAKHAK179.1°179.7°
CAYCALCAJHAJ179.3°179.8°
CAKCAICAXHAI180.0°179.9°
CAKCAICAXCLA179.8°180.0°
CAKCAICAXCAJ0.4°0.0°
CAICAXCLACAJ179.4°180.0°
CAICAXCAJCAL0.5°0.2°
CAXCAICAKHAK179.3°180.0°
CAICAXCAJHAJ179.5°180.0°
CLACAXCAJCAL179.8°179.7°
CLACAXCAIHAI0.2°0.1°
CLACAXCAJHAJ0.2°0.0°
CAXCAJCALHAJ180.0°179.7°
CAXCAJCALHAL179.3°179.7°
CAJCAXCAIHAI179.6°179.9°
CAZCAHCAFHAH180.0°179.9°
CAZCAHCAFCAG0.0°0.0°
CAHCAZCAQNAV0.1°0.6°
CAHCAZCBCHBC125.6°10.4°
CAHCAZCAQHAQ180.0°179.7°
CAZCAHCAFHAF180.0°180.0°
CAQCAZCAHCAF0.3°0.3°
CAZCAQNAVCAG0.4°0.6°
CAZCAQNAVHAQ180.0°179.7°
CAQCAZCBCHBC53.8°169.9°
CAQCAZCAHHAH179.7°179.8°
CAHCAFCAGHAF180.0°180.0°
CAHCAFCAGNAV0.5°0.0°
CAHCAFCAGHAG179.6°180.0°
CAFCAGNAVHAG180.0°180.0°
CAFCAGNAVCAQ0.7°0.3°
CAGCAFCAHHAH180.0°180.0°
CAGNAVCAQHAQ179.5°179.7°
NAVCAGCAFHAF179.6°180.0°
CAQNAVCAGHAG179.3°179.7°
HAMCAMCAOHAO0.1°0.3°
HAPCAPCANHAN0.4°0.1°
HAU1CAUCASHAS145.6°53.5°
HAU1CAUCASHAS2165.0°174.1°
HAU2CAUCASHAS173.7°66.5°
HAU2CAUCASHAS245.7°54.1°
HAT1CATCARHAR153.5°54.1°
HAT1CATCARHAR2172.9°66.5°
HAT2CATCARHAR166.6°174.2°
HAT2CATCARHAR252.8°53.6°
HAKCAKCAIHAI0.7°0.1°
HALCALCAJHAJ0.7°0.0°
HAHCAHCAFHAF0.0°0.1°
HAFCAFCAGHAG0.4°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon