TCO
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.46Å | 1.51Å | |
N | C1 | sing | 1.35Å | 1.38Å | |
N | HN | sing | 0.97Å | 1.03Å | |
CA | C | sing | 1.51Å | 1.57Å | |
CA | CB | sing | 1.53Å | 1.59Å | |
CA | HA | sing | 1.09Å | 1.11Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | HC | sing | 1.08Å | 1.10Å | |
CG2 | CD2 | sing | 1.53Å | 1.54Å | |
CG2 | CB | sing | 1.53Å | 1.53Å | |
CG2 | HG21 | sing | 1.09Å | 1.11Å | |
CG2 | HG22 | sing | 1.09Å | 1.11Å | |
CD2 | CE | sing | 1.53Å | 1.54Å | |
CD2 | HD21 | sing | 1.09Å | 1.11Å | |
CD2 | HD22 | sing | 1.09Å | 1.11Å | |
CE | CD1 | sing | 1.53Å | 1.53Å | |
CE | HE1 | sing | 1.09Å | 1.12Å | |
CE | HE2 | sing | 1.09Å | 1.12Å | |
CD1 | CG1 | sing | 1.53Å | 1.55Å | |
CD1 | HD11 | sing | 1.09Å | 1.12Å | |
CD1 | HD12 | sing | 1.09Å | 1.12Å | |
CG1 | CB | sing | 1.53Å | 1.57Å | |
CG1 | HG11 | sing | 1.09Å | 1.12Å | |
CG1 | HG12 | sing | 1.09Å | 1.12Å | |
CB | HB | sing | 1.09Å | 1.11Å | |
C1 | O1 | doub | 1.22Å | 1.24Å | |
C1 | O2 | sing | 1.35Å | 1.41Å | |
O2 | C3 | sing | 1.45Å | 1.46Å | |
C4 | C3 | sing | 1.53Å | 1.56Å | |
C4 | H41 | sing | 1.09Å | 1.12Å | |
C4 | H42 | sing | 1.09Å | 1.12Å | |
C4 | H43 | sing | 1.09Å | 1.12Å | |
C3 | C6 | sing | 1.53Å | 1.54Å | |
C3 | C5 | sing | 1.53Å | 1.55Å | |
C6 | H61 | sing | 1.09Å | 1.12Å | |
C6 | H62 | sing | 1.09Å | 1.11Å | |
C6 | H63 | sing | 1.09Å | 1.12Å | |
C5 | H51 | sing | 1.09Å | 1.12Å | |
C5 | H52 | sing | 1.09Å | 1.12Å | |
C5 | H53 | sing | 1.09Å | 1.11Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | C1 | 127.3° | 120.1° |
CA | N | HN | 119.0° | 119.9° |
N | CA | C | 109.6° | 109.5° |
N | CA | CB | 107.7° | 109.5° |
N | CA | HA | 108.7° | 109.4° |
C1 | N | HN | 109.9° | 120.0° |
N | C1 | O1 | 125.1° | 119.9° |
N | C1 | O2 | 112.6° | 120.1° |
C | CA | CB | 110.4° | 109.5° |
C | CA | HA | 108.6° | 109.5° |
CA | C | O | 127.2° | 120.0° |
CA | C | HC | 117.0° | 120.0° |
CB | CA | HA | 111.9° | 109.4° |
CA | CB | CG2 | 113.3° | 109.5° |
CA | CB | CG1 | 118.0° | 109.5° |
CA | CB | HB | 107.2° | 109.4° |
O | C | HC | 115.7° | 120.1° |
CD2 | CG2 | CB | 117.4° | 109.5° |
CD2 | CG2 | HG21 | 109.3° | 109.5° |
CD2 | CG2 | HG22 | 109.3° | 109.5° |
CG2 | CD2 | CE | 111.9° | 109.5° |
CG2 | CD2 | HD21 | 111.3° | 109.5° |
CG2 | CD2 | HD22 | 111.3° | 109.5° |
CB | CG2 | HG21 | 109.3° | 109.5° |
CB | CG2 | HG22 | 109.3° | 109.5° |
CG2 | CB | CG1 | 113.6° | 109.5° |
CG2 | CB | HB | 101.1° | 109.5° |
HG21 | CG2 | HG22 | 100.8° | 109.4° |
CE | CD2 | HD21 | 111.3° | 109.5° |
CE | CD2 | HD22 | 111.3° | 109.4° |
CD2 | CE | CD1 | 111.1° | 109.5° |
CD2 | CE | HE1 | 111.7° | 109.5° |
CD2 | CE | HE2 | 111.6° | 109.4° |
HD21 | CD2 | HD22 | 99.1° | 109.4° |
CD1 | CE | HE1 | 111.6° | 109.5° |
CD1 | CE | HE2 | 111.6° | 109.4° |
CE | CD1 | CG1 | 114.9° | 109.5° |
CE | CD1 | HD11 | 110.2° | 109.4° |
CE | CD1 | HD12 | 110.2° | 109.5° |
HE1 | CE | HE2 | 98.7° | 109.5° |
CG1 | CD1 | HD11 | 110.2° | 109.4° |
CG1 | CD1 | HD12 | 110.2° | 109.5° |
CD1 | CG1 | CB | 116.7° | 109.5° |
CD1 | CG1 | HG11 | 109.5° | 109.5° |
CD1 | CG1 | HG12 | 109.6° | 109.5° |
HD11 | CD1 | HD12 | 100.0° | 109.5° |
CB | CG1 | HG11 | 109.6° | 109.5° |
CB | CG1 | HG12 | 109.6° | 109.5° |
CG1 | CB | HB | 101.0° | 109.4° |
HG11 | CG1 | HG12 | 100.6° | 109.4° |
O1 | C1 | O2 | 122.3° | 120.0° |
C1 | O2 | C3 | 128.0° | 120.0° |
O2 | C3 | C4 | 104.9° | 109.5° |
O2 | C3 | C6 | 110.6° | 109.5° |
O2 | C3 | C5 | 110.3° | 109.5° |
C3 | C4 | H41 | 104.9° | 109.5° |
C3 | C4 | H42 | 113.9° | 109.5° |
C3 | C4 | H43 | 114.0° | 109.5° |
C4 | C3 | C6 | 105.8° | 109.5° |
C4 | C3 | C5 | 109.9° | 109.4° |
H41 | C4 | H42 | 113.9° | 109.4° |
H41 | C4 | H43 | 113.9° | 109.5° |
H42 | C4 | H43 | 96.5° | 109.5° |
C6 | C3 | C5 | 114.9° | 109.5° |
C3 | C6 | H61 | 110.5° | 109.5° |
C3 | C6 | H62 | 111.8° | 109.5° |
C3 | C6 | H63 | 111.8° | 109.5° |
C3 | C5 | H51 | 110.3° | 109.5° |
C3 | C5 | H52 | 111.9° | 109.4° |
C3 | C5 | H53 | 111.9° | 109.5° |
H61 | C6 | H62 | 111.9° | 109.4° |
H61 | C6 | H63 | 111.8° | 109.4° |
H62 | C6 | H63 | 98.6° | 109.5° |
H51 | C5 | H52 | 111.9° | 109.4° |
H51 | C5 | H53 | 112.0° | 109.5° |
H52 | C5 | H53 | 98.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | C1 | HN | 157.4° | 179.8° |
N | CA | C | CB | 118.4° | 120.1° |
N | CA | C | HA | 118.6° | 119.9° |
N | CA | CB | HA | 119.3° | 119.9° |
N | CA | C | O | 120.1° | 0.0° |
N | CA | C | HC | 58.3° | 180.0° |
N | CA | CB | CG2 | 133.6° | 180.0° |
N | CA | CB | CG1 | 90.1° | 59.9° |
N | CA | CB | HB | 22.9° | 60.0° |
CA | N | C1 | O1 | 15.8° | 0.2° |
CA | N | C1 | O2 | 163.7° | 179.9° |
C1 | N | CA | C | 139.9° | 89.9° |
C1 | N | CA | CB | 100.0° | 150.0° |
C1 | N | CA | HA | 21.3° | 30.1° |
N | C1 | O1 | O2 | 179.4° | 179.9° |
N | C1 | O2 | C3 | 164.4° | 179.9° |
HN | N | CA | C | 64.5° | 89.9° |
HN | N | CA | CB | 55.6° | 30.1° |
HN | N | CA | HA | 177.0° | 150.1° |
HN | N | C1 | O1 | 173.2° | 180.0° |
HN | N | C1 | O2 | 6.2° | 0.1° |
C | CA | CB | HA | 121.1° | 120.0° |
CA | C | O | HC | 178.4° | 180.0° |
C | CA | CB | CG2 | 106.9° | 60.0° |
C | CA | CB | CG1 | 29.5° | 180.0° |
C | CA | CB | HB | 142.5° | 60.1° |
CB | CA | C | O | 121.5° | 120.1° |
CB | CA | C | HC | 60.1° | 60.0° |
CA | CB | CG2 | CD2 | 158.6° | 180.0° |
CA | CB | CG2 | CG1 | 138.3° | 120.0° |
CA | CB | CG2 | HB | 114.4° | 120.0° |
CA | CB | CG2 | HG21 | 76.2° | 60.0° |
CA | CB | CG2 | HG22 | 33.3° | 60.0° |
CA | CB | CG1 | CD1 | 176.6° | 180.0° |
CA | CB | CG1 | HB | 116.5° | 119.9° |
CA | CB | CG1 | HG11 | 51.3° | 60.0° |
CA | CB | CG1 | HG12 | 58.2° | 59.9° |
HA | CA | C | O | 1.5° | 120.0° |
HA | CA | C | HC | 176.9° | 60.0° |
HA | CA | CB | CG2 | 14.2° | 60.1° |
HA | CA | CB | CG1 | 150.5° | 60.0° |
HA | CA | CB | HB | 96.4° | 179.9° |
CD2 | CG2 | CB | HG21 | 125.2° | 120.0° |
CD2 | CG2 | CB | HG22 | 125.2° | 120.0° |
CD2 | CG2 | HG21 | HG22 | 115.1° | 120.0° |
CG2 | CD2 | CE | HD21 | 125.3° | 120.0° |
CG2 | CD2 | CE | HD22 | 125.3° | 120.0° |
CG2 | CD2 | HD21 | HD22 | 117.2° | 120.0° |
CG2 | CD2 | CE | CD1 | 60.8° | 59.9° |
CG2 | CD2 | CE | HE1 | 173.9° | 180.0° |
CG2 | CD2 | CE | HE2 | 64.5° | 60.0° |
CD2 | CG2 | CB | CG1 | 20.3° | 60.0° |
CD2 | CG2 | CB | HB | 87.1° | 60.0° |
CB | CG2 | HG21 | HG22 | 115.1° | 120.0° |
CB | CG2 | CD2 | CE | 29.0° | 60.0° |
CB | CG2 | CD2 | HD21 | 96.2° | 60.0° |
CB | CG2 | CD2 | HD22 | 154.2° | 180.0° |
CG2 | CB | CG1 | CD1 | 40.4° | 60.0° |
CG2 | CB | CG1 | HB | 107.4° | 120.0° |
CG2 | CB | CG1 | HG11 | 84.9° | 60.0° |
CG2 | CB | CG1 | HG12 | 165.7° | 180.0° |
HG21 | CG2 | CD2 | CE | 96.2° | 180.0° |
HG21 | CG2 | CD2 | HD21 | 138.5° | 60.0° |
HG21 | CG2 | CD2 | HD22 | 29.0° | 60.0° |
HG21 | CG2 | CB | CG1 | 145.5° | 180.0° |
HG21 | CG2 | CB | HB | 38.2° | 60.0° |
HG22 | CG2 | CD2 | CE | 154.3° | 60.0° |
HG22 | CG2 | CD2 | HD21 | 29.0° | 180.0° |
HG22 | CG2 | CD2 | HD22 | 80.5° | 60.0° |
HG22 | CG2 | CB | CG1 | 105.0° | 60.0° |
HG22 | CG2 | CB | HB | 147.7° | 180.0° |
CE | CD2 | HD21 | HD22 | 117.2° | 119.9° |
CD2 | CE | CD1 | HE1 | 125.3° | 120.1° |
CD2 | CE | CD1 | HE2 | 125.3° | 119.9° |
CD2 | CE | HE1 | HE2 | 117.5° | 120.0° |
CD2 | CE | CD1 | CG1 | 40.8° | 60.0° |
CD2 | CE | CD1 | HD11 | 84.5° | 60.0° |
CD2 | CE | CD1 | HD12 | 166.1° | 180.0° |
HD21 | CD2 | CE | CD1 | 64.5° | 60.1° |
HD21 | CD2 | CE | HE1 | 60.8° | 60.0° |
HD21 | CD2 | CE | HE2 | 170.2° | 180.0° |
HD22 | CD2 | CE | CD1 | 174.0° | 180.0° |
HD22 | CD2 | CE | HE1 | 48.7° | 59.9° |
HD22 | CD2 | CE | HE2 | 60.7° | 60.1° |
CD1 | CE | HE1 | HE2 | 117.5° | 120.0° |
CE | CD1 | CG1 | HD11 | 125.3° | 120.0° |
CE | CD1 | CG1 | HD12 | 125.3° | 120.0° |
CE | CD1 | HD11 | HD12 | 116.0° | 120.0° |
CE | CD1 | CG1 | CB | 9.2° | 60.0° |
CE | CD1 | CG1 | HG11 | 116.1° | 60.0° |
CE | CD1 | CG1 | HG12 | 134.5° | 180.0° |
HE1 | CE | CD1 | CG1 | 166.1° | 180.0° |
HE1 | CE | CD1 | HD11 | 40.8° | 60.1° |
HE1 | CE | CD1 | HD12 | 68.6° | 59.9° |
HE2 | CE | CD1 | CG1 | 84.5° | 60.0° |
HE2 | CE | CD1 | HD11 | 150.2° | 179.9° |
HE2 | CE | CD1 | HD12 | 40.8° | 60.1° |
CG1 | CD1 | HD11 | HD12 | 116.1° | 120.0° |
CD1 | CG1 | CB | HG11 | 125.3° | 120.0° |
CD1 | CG1 | CB | HG12 | 125.3° | 120.0° |
CD1 | CG1 | HG11 | HG12 | 115.3° | 120.0° |
CD1 | CG1 | CB | HB | 67.0° | 60.0° |
HD11 | CD1 | CG1 | CB | 134.5° | 60.0° |
HD11 | CD1 | CG1 | HG11 | 9.2° | 180.0° |
HD11 | CD1 | CG1 | HG12 | 100.2° | 60.0° |
HD12 | CD1 | CG1 | CB | 116.1° | 180.0° |
HD12 | CD1 | CG1 | HG11 | 118.6° | 60.0° |
HD12 | CD1 | CG1 | HG12 | 9.2° | 60.0° |
CB | CG1 | HG11 | HG12 | 115.4° | 120.0° |
HG11 | CG1 | CB | HB | 167.8° | 179.9° |
HG12 | CG1 | CB | HB | 58.3° | 60.0° |
O1 | C1 | O2 | C3 | 16.2° | 0.0° |
C1 | O2 | C3 | C4 | 176.8° | 180.0° |
C1 | O2 | C3 | C6 | 63.1° | 60.1° |
C1 | O2 | C3 | C5 | 65.0° | 60.0° |
O2 | C3 | C4 | C6 | 116.9° | 120.0° |
O2 | C3 | C4 | C5 | 118.5° | 120.0° |
O2 | C3 | C4 | H41 | 180.0° | 180.0° |
O2 | C3 | C4 | H42 | 54.7° | 60.0° |
O2 | C3 | C4 | H43 | 54.7° | 60.0° |
O2 | C3 | C6 | C5 | 125.6° | 120.1° |
O2 | C3 | C6 | H61 | 180.0° | 60.0° |
O2 | C3 | C6 | H62 | 54.7° | 179.9° |
O2 | C3 | C6 | H63 | 54.8° | 60.0° |
O2 | C3 | C5 | H51 | 179.9° | 59.9° |
O2 | C3 | C5 | H52 | 54.8° | 60.0° |
O2 | C3 | C5 | H53 | 54.7° | 180.0° |
C3 | C4 | H41 | H42 | 125.3° | 120.0° |
C3 | C4 | H41 | H43 | 125.3° | 120.0° |
C3 | C4 | H42 | H43 | 119.8° | 120.0° |
C4 | C3 | C6 | C5 | 121.4° | 120.0° |
C4 | C3 | C6 | H61 | 66.9° | 60.0° |
C4 | C3 | C6 | H62 | 167.8° | 60.0° |
C4 | C3 | C6 | H63 | 58.3° | 180.0° |
C4 | C3 | C5 | H51 | 64.8° | 60.0° |
C4 | C3 | C5 | H52 | 60.4° | 180.0° |
C4 | C3 | C5 | H53 | 169.8° | 60.0° |
H41 | C4 | H42 | H43 | 119.8° | 120.0° |
H41 | C4 | C3 | C6 | 63.1° | 60.0° |
H41 | C4 | C3 | C5 | 61.5° | 60.0° |
H42 | C4 | C3 | C6 | 62.2° | 60.0° |
H42 | C4 | C3 | C5 | 173.2° | 180.0° |
H43 | C4 | C3 | C6 | 171.7° | 180.0° |
H43 | C4 | C3 | C5 | 63.8° | 60.0° |
C3 | C6 | H61 | H62 | 125.3° | 120.0° |
C3 | C6 | H61 | H63 | 125.2° | 120.0° |
C3 | C6 | H62 | H63 | 117.7° | 120.0° |
C6 | C3 | C5 | H51 | 54.4° | 180.0° |
C6 | C3 | C5 | H52 | 179.5° | 60.0° |
C6 | C3 | C5 | H53 | 71.0° | 60.0° |
C5 | C3 | C6 | H61 | 54.5° | 180.0° |
C5 | C3 | C6 | H62 | 70.8° | 60.0° |
C5 | C3 | C6 | H63 | 179.7° | 60.0° |
C3 | C5 | H51 | H52 | 125.2° | 119.9° |
C3 | C5 | H51 | H53 | 125.3° | 120.1° |
C3 | C5 | H52 | H53 | 117.8° | 120.0° |
H61 | C6 | H62 | H63 | 117.7° | 119.9° |
H51 | C5 | H52 | H53 | 117.9° | 120.0° |