Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

TBY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11C10sing1.53Å1.53Å
C11C12sing1.53Å1.51Å
C10SN1sing2.15Å2.14Å
SN1C2sing2.15Å2.14Å
SN1C6sing2.15Å2.15Å
C2C3sing1.53Å1.52Å
C3C4sing1.53Å1.53Å
C4C5sing1.53Å1.51Å
C6C7sing1.53Å1.52Å
C7C8sing1.53Å1.52Å
C8C9sing1.53Å1.50Å
C12C13sing1.53Å1.51Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C5H5Asing1.09Å1.10Å
C5H5Bsing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
C9H9Bsing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C13H13Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C10C11C12109.7°109.5°
C11C10SN1112.2°109.5°
C10C11H11109.4°109.4°
C10C11H11A109.3°109.4°
C11C10H10108.5°109.5°
C11C10H10A107.9°109.5°
C11C12C13111.3°109.5°
C12C11H11109.4°109.5°
C12C11H11A109.3°109.5°
C11C12H12108.9°109.5°
C11C12H12A108.5°109.5°
C10SN1C2107.7°120.0°
C10SN1C697.0°120.0°
SN1C10H10108.5°109.5°
SN1C10H10A107.9°109.5°
C2SN1C6126.8°120.0°
SN1C2C3108.5°109.4°
SN1C2H2109.8°109.4°
SN1C2H2A110.0°109.4°
SN1C6C7110.0°109.5°
SN1C6H6109.3°109.5°
SN1C6H6A109.1°109.5°
C2C3C4108.8°109.5°
C3C2H2109.8°109.5°
C3C2H2A110.0°109.5°
C2C3H3109.7°109.5°
C2C3H3A109.8°109.5°
C3C4C5110.2°109.5°
C4C3H3109.7°109.5°
C4C3H3A109.8°109.5°
C3C4H4109.2°109.5°
C3C4H4A109.1°109.5°
C5C4H4109.2°109.5°
C5C4H4A109.1°109.5°
C4C5H5109.5°109.5°
C4C5H5A109.4°109.5°
C4C5H5B109.5°109.4°
C6C7C8111.5°109.4°
C7C6H6109.3°109.5°
C7C6H6A109.2°109.5°
C6C7H7108.8°109.5°
C6C7H7A108.3°109.5°
C7C8C9107.9°109.4°
C8C7H7108.8°109.5°
C8C7H7A108.3°109.5°
C7C8H8110.0°109.5°
C7C8H8A110.3°109.5°
C9C8H8110.0°109.5°
C9C8H8A110.3°109.5°
C8C9H9109.5°109.4°
C8C9H9A109.5°109.5°
C8C9H9B109.4°109.5°
C13C12H12108.9°109.5°
C13C12H12A108.4°109.5°
C12C13H13109.5°109.5°
C12C13H13A109.5°109.5°
C12C13H13B109.4°109.5°
H11C11H11A109.7°109.5°
H10C10H10A111.7°109.4°
H2C2H2A108.7°109.5°
H3C3H3A109.0°109.4°
H4C4H4A110.0°109.4°
H5C5H5A109.5°109.5°
H5C5H5B109.4°109.4°
H5AC5H5B109.5°109.4°
H6C6H6A109.9°109.5°
H7C7H7A111.1°109.5°
H8C8H8A108.3°109.4°
H9C9H9A109.4°109.5°
H9C9H9B109.5°109.5°
H9AC9H9B109.5°109.5°
H12C12H12A110.9°109.4°
H13C13H13A109.4°109.4°
H13C13H13B109.5°109.5°
H13AC13H13B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C10C11C12H11120.0°120.0°
C10C11C12H11A119.9°120.0°
C11C10SN1H10120.0°120.0°
C11C10SN1H10A118.8°120.0°
C11C10SN1C290.8°180.0°
C11C10SN1C641.5°0.0°
C10C11C12C13176.4°180.0°
C10C11H11H11A119.9°120.0°
C11C10H10H10A118.9°120.0°
C10C11C12H1263.6°60.0°
C10C11C12H12A57.2°60.0°
C12C11C10SN1173.2°180.0°
C11C12C13H12120.0°120.0°
C11C12C13H12A119.2°120.0°
C12C11H11H11A119.9°120.0°
C12C11C10H1053.3°60.0°
C12C11C10H10A67.9°60.0°
C11C12H12H12A119.3°120.0°
C11C12C13H13119.0°60.0°
C11C12C13H13A121.1°60.0°
C11C12C13H13B1.0°180.0°
C10SN1C2C6113.5°180.0°
C10SN1C2C317.3°180.0°
C10SN1C6C7149.5°180.0°
SN1C10C11H1153.3°60.0°
SN1C10C11H11A66.9°60.0°
SN1C10H10H10A118.9°120.0°
C10SN1C2H2137.3°60.0°
C10SN1C2H2A103.1°60.0°
C10SN1C6H690.5°60.0°
C10SN1C6H6A29.7°60.0°
SN1C2C3H2120.0°120.0°
SN1C2C3H2A120.4°120.0°
SN1C2C3C480.3°180.0°
C2SN1C6C792.2°0.0°
C2SN1C10H10149.2°60.0°
C2SN1C10H10A28.0°60.0°
SN1C2H2H2A120.4°120.0°
SN1C2C3H3159.7°60.0°
SN1C2C3H3A40.0°60.0°
C2SN1C6H627.8°120.0°
C2SN1C6H6A148.0°120.0°
C6SN1C2C396.3°0.0°
SN1C6C7H6120.0°120.0°
SN1C6C7H6A119.7°120.0°
SN1C6C7C8126.2°180.0°
C6SN1C10H1078.5°120.0°
C6SN1C10H10A160.3°120.0°
C6SN1C2H223.8°120.0°
C6SN1C2H2A143.4°120.0°
SN1C6H6H6A119.7°120.0°
SN1C6C7H76.2°60.0°
SN1C6C7H7A114.6°60.0°
C2C3C4H3120.0°120.0°
C2C3C4H3A120.3°120.0°
C2C3C4C5174.4°180.0°
C3C2H2H2A120.4°120.1°
C2C3H3H3A120.3°120.1°
C2C3C4H454.4°60.0°
C2C3C4H4A65.9°60.0°
C3C4C5H4120.0°120.0°
C3C4C5H4A119.7°120.0°
C4C3C2H239.7°60.0°
C4C3C2H2A159.3°60.0°
C4C3H3H3A120.3°119.9°
C3C4H4H4A119.7°119.9°
C3C4C5H544.7°60.0°
C3C4C5H5A75.3°60.0°
C3C4C5H5B164.7°180.0°
C5C4C3H365.6°60.0°
C5C4C3H3A54.1°60.0°
C5C4H4H4A119.7°120.1°
C4C5H5H5A120.0°120.1°
C4C5H5H5B120.0°120.0°
C4C5H5AH5B120.0°120.0°
C6C7C8H7120.0°120.0°
C6C7C8H7A119.1°120.0°
C6C7C8C9130.6°180.0°
C7C6H6H6A119.8°120.0°
C6C7H7H7A119.1°120.0°
C6C7C8H8109.4°60.0°
C6C7C8H8A10.0°60.0°
C7C8C9H8120.0°120.0°
C7C8C9H8A120.6°120.0°
C8C7C6H6113.8°60.0°
C8C7C6H6A6.5°60.0°
C8C7H7H7A119.2°120.0°
C7C8H8H8A120.6°120.1°
C7C8C9H9107.3°180.0°
C7C8C9H9A12.6°60.0°
C7C8C9H9B132.6°60.0°
C9C8C7H710.6°60.0°
C9C8C7H7A110.3°60.0°
C9C8H8H8A120.6°120.0°
C8C9H9H9A120.0°120.0°
C8C9H9H9B120.0°120.0°
C8C9H9AH9B120.0°120.0°
C13C12C11H1156.4°60.0°
C13C12C11H11A63.7°60.0°
C13C12H12H12A119.2°120.0°
C12C13H13H13A120.0°120.0°
C12C13H13H13B120.0°120.0°
C12C13H13AH13B120.0°120.0°
H11C11C10H1066.7°60.0°
H11C11C10H10A172.1°180.0°
H11C11C12H12176.4°180.0°
H11C11C12H12A62.8°60.0°
H11AC11C10H10173.1°180.0°
H11AC11C10H10A52.0°60.0°
H11AC11C12H1256.3°60.0°
H11AC11C12H12A177.1°180.0°
H2C2C3H380.3°180.0°
H2C2C3H3A160.0°60.0°
H2AC2C3H339.3°60.0°
H2AC2C3H3A80.4°180.0°
H3C3C4H4174.4°180.0°
H3C3C4H4A54.1°60.1°
H3AC3C4H465.9°60.1°
H3AC3C4H4A173.8°180.0°
H4C4C5H5164.7°180.0°
H4C4C5H5A44.7°60.0°
H4C4C5H5B75.3°60.0°
H4AC4C5H575.0°60.0°
H4AC4C5H5A165.0°180.0°
H4AC4C5H5B45.0°60.0°
H5C5H5AH5B120.0°120.0°
H6C6C7H7126.2°180.0°
H6C6C7H7A5.4°60.0°
H6AC6C7H7113.5°60.0°
H6AC6C7H7A125.6°180.0°
H7C7C8H8130.6°180.0°
H7C7C8H8A110.0°60.0°
H7AC7C8H89.7°60.0°
H7AC7C8H8A129.1°180.0°
H8C8C9H9132.7°60.0°
H8C8C9H9A107.4°180.0°
H8C8C9H9B12.6°60.0°
H8AC8C9H913.3°60.0°
H8AC8C9H9A133.2°60.0°
H8AC8C9H9B106.8°180.0°
H9C9H9AH9B120.0°120.0°
H12C12C13H131.1°180.0°
H12C12C13H13A118.9°60.0°
H12C12C13H13B121.1°60.0°
H12AC12C13H13121.8°60.0°
H12AC12C13H13A1.9°180.0°
H12AC12C13H13B118.2°60.0°
H13C13H13AH13B120.0°120.0°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon