ST6
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C' | O1' | doub | 1.35Å | 1.25Å | |
| C' | O2' | sing | 1.22Å | 1.24Å | |
| C' | C1 | sing | 1.47Å | 1.38Å | |
| O2' | HO2' | sing | 3.94Å | 0.95Å | |
| C1 | C2 | doub | 1.40Å | 1.37Å | Aromatic |
| C1 | C6 | sing | 1.40Å | 1.39Å | Aromatic |
| C2 | C3 | sing | 1.38Å | 1.37Å | Aromatic |
| C2 | H2 | sing | 1.08Å | 1.10Å | |
| C3 | N3 | sing | 1.40Å | 1.36Å | |
| C3 | C4 | doub | 1.40Å | 1.39Å | Aromatic |
| N3 | C3' | sing | 1.35Å | 1.33Å | |
| N3 | HN3 | sing | 0.97Å | 0.99Å | |
| C3' | O3 | doub | 1.21Å | 1.24Å | |
| C3' | CM3 | sing | 1.51Å | 1.48Å | |
| CM3 | N3' | sing | 1.47Å | 1.47Å | |
| CM3 | HM31 | sing | 1.09Å | 0.97Å | |
| CM3 | HM32 | sing | 1.09Å | 0.98Å | |
| N3' | HN31 | sing | 1.01Å | 1.03Å | |
| N3' | HN32 | sing | 1.01Å | 0.98Å | |
| N3' | HN33 | sing | 1.01Å | 1.05Å | |
| C4 | N4 | sing | 1.39Å | 1.38Å | |
| C4 | C5 | sing | 1.39Å | 1.38Å | Aromatic |
| N4 | C4' | sing | 1.35Å | 1.33Å | |
| N4 | HN4 | sing | 0.97Å | 0.99Å | |
| C4' | O4 | doub | 1.21Å | 1.23Å | |
| C4' | CM4 | sing | 1.51Å | 1.52Å | |
| CM4 | HM41 | sing | 1.09Å | 1.11Å | |
| CM4 | HM42 | sing | 1.09Å | 1.12Å | |
| CM4 | HM43 | sing | 1.09Å | 1.12Å | |
| C5 | C6 | doub | 1.38Å | 1.38Å | Aromatic |
| C5 | H5 | sing | 1.08Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1' | C' | O2' | 123.6° | 119.9° |
| O1' | C' | C1 | 118.5° | 120.0° |
| O2' | C' | C1 | 117.9° | 120.0° |
| C' | O2' | HO2' | 123.6° | 58.8° |
| C' | C1 | C2 | 119.8° | 120.0° |
| C' | C1 | C6 | 121.1° | 120.0° |
| C2 | C1 | C6 | 118.8° | 119.9° |
| C1 | C2 | C3 | 121.1° | 119.8° |
| C1 | C2 | H2 | 119.6° | 120.1° |
| C1 | C6 | C5 | 120.3° | 120.0° |
| C1 | C6 | H6 | 120.3° | 120.0° |
| C3 | C2 | H2 | 119.4° | 120.1° |
| C2 | C3 | N3 | 119.3° | 120.0° |
| C2 | C3 | C4 | 120.1° | 120.0° |
| N3 | C3 | C4 | 120.2° | 120.1° |
| C3 | N3 | C3' | 116.5° | 120.0° |
| C3 | N3 | HN3 | 122.5° | 120.0° |
| C3 | C4 | N4 | 119.7° | 120.0° |
| C3 | C4 | C5 | 119.6° | 120.1° |
| C3' | N3 | HN3 | 120.8° | 120.0° |
| N3 | C3' | O3 | 122.8° | 120.0° |
| N3 | C3' | CM3 | 118.0° | 120.0° |
| O3 | C3' | CM3 | 119.2° | 120.0° |
| C3' | CM3 | N3' | 105.4° | 109.5° |
| C3' | CM3 | HM31 | 109.5° | 109.4° |
| C3' | CM3 | HM32 | 110.3° | 109.5° |
| N3' | CM3 | HM31 | 110.1° | 109.5° |
| N3' | CM3 | HM32 | 110.7° | 109.5° |
| CM3 | N3' | HN31 | 119.3° | 109.5° |
| CM3 | N3' | HN32 | 99.9° | 109.5° |
| CM3 | N3' | HN33 | 110.8° | 109.5° |
| HM31 | CM3 | HM32 | 110.7° | 109.5° |
| HN31 | N3' | HN32 | 109.2° | 109.5° |
| HN31 | N3' | HN33 | 107.5° | 109.5° |
| HN32 | N3' | HN33 | 109.7° | 109.4° |
| N4 | C4 | C5 | 120.6° | 119.9° |
| C4 | N4 | C4' | 121.8° | 120.0° |
| C4 | N4 | HN4 | 122.3° | 120.0° |
| C4 | C5 | C6 | 119.9° | 120.2° |
| C4 | C5 | H5 | 119.9° | 119.9° |
| C4' | N4 | HN4 | 116.0° | 120.0° |
| N4 | C4' | O4 | 122.0° | 119.9° |
| N4 | C4' | CM4 | 118.8° | 120.0° |
| O4 | C4' | CM4 | 119.2° | 120.0° |
| C4' | CM4 | HM41 | 118.9° | 109.5° |
| C4' | CM4 | HM42 | 108.9° | 109.5° |
| C4' | CM4 | HM43 | 108.9° | 109.5° |
| HM41 | CM4 | HM42 | 108.8° | 109.4° |
| HM41 | CM4 | HM43 | 108.8° | 109.4° |
| HM42 | CM4 | HM43 | 101.2° | 109.5° |
| C6 | C5 | H5 | 120.2° | 119.9° |
| C5 | C6 | H6 | 119.4° | 119.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1' | C' | O2' | C1 | 177.9° | 180.0° |
| O1' | C' | O2' | HO2' | 179.9° | 174.5° |
| O1' | C' | C1 | C2 | 43.1° | 180.0° |
| O1' | C' | C1 | C6 | 131.6° | 0.0° |
| O2' | C' | C1 | C2 | 134.9° | 0.1° |
| O2' | C' | C1 | C6 | 50.4° | 180.0° |
| C1 | C' | O2' | HO2' | 2.2° | 5.5° |
| C' | C1 | C2 | C6 | 174.8° | 179.9° |
| C' | C1 | C2 | C3 | 175.2° | 179.8° |
| C' | C1 | C2 | H2 | 4.8° | 0.1° |
| C' | C1 | C6 | C5 | 175.3° | 179.9° |
| C' | C1 | C6 | H6 | 4.7° | 0.0° |
| C1 | C2 | C3 | H2 | 180.0° | 179.8° |
| C1 | C2 | C3 | N3 | 174.3° | 179.9° |
| C1 | C2 | C3 | C4 | 1.2° | 0.5° |
| C2 | C1 | C6 | C5 | 0.6° | 0.0° |
| C2 | C1 | C6 | H6 | 179.4° | 179.9° |
| C6 | C1 | C2 | C3 | 0.4° | 0.2° |
| C6 | C1 | C2 | H2 | 179.6° | 180.0° |
| C1 | C6 | C5 | C4 | 1.6° | 0.0° |
| C1 | C6 | C5 | H6 | 180.0° | 179.9° |
| C1 | C6 | C5 | H5 | 178.4° | 180.0° |
| C2 | C3 | N3 | C4 | 173.1° | 179.6° |
| C2 | C3 | N3 | C3' | 97.0° | 24.8° |
| C2 | C3 | N3 | HN3 | 87.6° | 155.3° |
| C2 | C3 | C4 | N4 | 176.7° | 179.8° |
| C2 | C3 | C4 | C5 | 2.1° | 0.5° |
| H2 | C2 | C3 | N3 | 5.7° | 0.2° |
| H2 | C2 | C3 | C4 | 178.8° | 179.8° |
| C3 | N3 | C3' | HN3 | 175.4° | 179.9° |
| C3 | N3 | C3' | O3 | 18.5° | 5.8° |
| C3 | N3 | C3' | CM3 | 161.6° | 174.2° |
| N3 | C3 | C4 | N4 | 3.7° | 0.2° |
| N3 | C3 | C4 | C5 | 175.2° | 179.9° |
| C4 | C3 | N3 | C3' | 76.1° | 154.8° |
| C4 | C3 | N3 | HN3 | 99.2° | 25.1° |
| C3 | C4 | N4 | C5 | 178.8° | 179.7° |
| C3 | C4 | N4 | C4' | 89.5° | 145.4° |
| C3 | C4 | N4 | HN4 | 90.6° | 34.5° |
| C3 | C4 | C5 | C6 | 2.3° | 0.3° |
| C3 | C4 | C5 | H5 | 177.7° | 179.8° |
| N3 | C3' | O3 | CM3 | 179.9° | 180.0° |
| N3 | C3' | CM3 | N3' | 157.8° | 180.0° |
| N3 | C3' | CM3 | HM31 | 83.7° | 60.0° |
| N3 | C3' | CM3 | HM32 | 38.3° | 60.0° |
| HN3 | N3 | C3' | O3 | 156.9° | 174.1° |
| HN3 | N3 | C3' | CM3 | 23.0° | 5.9° |
| O3 | C3' | CM3 | N3' | 22.3° | 0.0° |
| O3 | C3' | CM3 | HM31 | 96.1° | 120.0° |
| O3 | C3' | CM3 | HM32 | 141.8° | 120.0° |
| C3' | CM3 | N3' | HM31 | 118.0° | 119.9° |
| C3' | CM3 | N3' | HM32 | 119.2° | 120.0° |
| C3' | CM3 | HM31 | HM32 | 121.8° | 120.0° |
| C3' | CM3 | N3' | HN31 | 56.4° | 180.0° |
| C3' | CM3 | N3' | HN32 | 175.2° | 60.0° |
| C3' | CM3 | N3' | HN33 | 69.2° | 60.0° |
| N3' | CM3 | HM31 | HM32 | 122.7° | 120.0° |
| CM3 | N3' | HN31 | HN32 | 113.9° | 120.0° |
| CM3 | N3' | HN31 | HN33 | 127.1° | 120.0° |
| CM3 | N3' | HN32 | HN33 | 116.5° | 120.0° |
| HM31 | CM3 | N3' | HN31 | 61.6° | 60.0° |
| HM31 | CM3 | N3' | HN32 | 57.2° | 180.0° |
| HM31 | CM3 | N3' | HN33 | 172.8° | 60.0° |
| HM32 | CM3 | N3' | HN31 | 175.6° | 60.0° |
| HM32 | CM3 | N3' | HN32 | 65.6° | 60.0° |
| HM32 | CM3 | N3' | HN33 | 50.1° | 180.0° |
| HN31 | N3' | HN32 | HN33 | 117.5° | 120.0° |
| C4 | N4 | C4' | HN4 | 179.9° | 180.0° |
| C4 | N4 | C4' | O4 | 1.4° | 4.6° |
| C4 | N4 | C4' | CM4 | 179.7° | 175.4° |
| N4 | C4 | C5 | C6 | 176.5° | 180.0° |
| N4 | C4 | C5 | H5 | 3.5° | 0.1° |
| C5 | C4 | N4 | C4' | 91.6° | 34.9° |
| C5 | C4 | N4 | HN4 | 88.2° | 145.2° |
| C4 | C5 | C6 | H5 | 180.0° | 180.0° |
| C4 | C5 | C6 | H6 | 178.4° | 179.9° |
| N4 | C4' | O4 | CM4 | 178.9° | 180.0° |
| N4 | C4' | CM4 | HM41 | 180.0° | 90.0° |
| N4 | C4' | CM4 | HM42 | 54.8° | 29.9° |
| N4 | C4' | CM4 | HM43 | 54.7° | 150.0° |
| HN4 | N4 | C4' | O4 | 178.5° | 175.4° |
| HN4 | N4 | C4' | CM4 | 0.5° | 4.6° |
| O4 | C4' | CM4 | HM41 | 1.0° | 90.0° |
| O4 | C4' | CM4 | HM42 | 124.2° | 150.0° |
| O4 | C4' | CM4 | HM43 | 126.3° | 30.0° |
| C4' | CM4 | HM41 | HM42 | 125.3° | 120.0° |
| C4' | CM4 | HM41 | HM43 | 125.3° | 120.0° |
| C4' | CM4 | HM42 | HM43 | 114.6° | 120.0° |
| HM41 | CM4 | HM42 | HM43 | 114.5° | 120.0° |
| H5 | C5 | C6 | H6 | 1.6° | 0.0° |
