SSU
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2' | C2' | sing | 1.41Å | 1.43Å | |
| O2' | HO2' | sing | 0.97Å | 0.96Å | |
| C2' | C1' | sing | 1.52Å | 1.53Å | |
| C2' | C3' | sing | 1.51Å | 1.52Å | |
| C2' | H2' | sing | 1.10Å | 1.09Å | |
| C1' | O4' | sing | 1.44Å | 1.44Å | |
| C1' | N1 | sing | 1.43Å | 1.47Å | |
| C1' | H1' | sing | 1.09Å | 1.09Å | |
| O4' | C4' | sing | 1.44Å | 1.43Å | |
| C4' | C5' | sing | 1.52Å | 1.53Å | |
| C4' | C3' | sing | 1.52Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.09Å | |
| C5' | O5' | sing | 1.42Å | 1.43Å | |
| C5' | H5' | sing | 1.09Å | 1.09Å | |
| C5' | H5'' | sing | 1.09Å | 1.09Å | |
| O5' | P | sing | 1.62Å | 1.61Å | |
| P | S1P | doub | 1.94Å | 2.11Å | |
| P | OP2 | sing | 1.62Å | 1.48Å | |
| P | OP3 | sing | 1.62Å | 13.47Å | |
| OP2 | H2P | sing | 0.98Å | 0.95Å | |
| OP3 | H3P | sing | 0.98Å | 0.95Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | H3' | sing | 1.09Å | 1.09Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| N1 | C6 | sing | 1.39Å | 1.37Å | |
| N1 | C2 | sing | 1.41Å | 1.38Å | |
| C6 | C5 | doub | 1.33Å | 1.36Å | |
| C6 | H6 | sing | 1.09Å | 1.09Å | |
| C5 | C4 | sing | 1.48Å | 1.45Å | |
| C5 | H5 | sing | 1.08Å | 1.09Å | |
| C4 | O4 | doub | 1.23Å | 1.23Å | |
| C4 | N3 | sing | 1.39Å | 1.38Å | |
| N3 | C2 | sing | 1.40Å | 1.38Å | |
| N3 | H3 | sing | 1.02Å | 1.01Å | |
| C2 | O2 | doub | 1.23Å | 1.23Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2' | O2' | HO2' | 107.3° | 107.1° |
| O2' | C2' | C1' | 111.4° | 112.6° |
| O2' | C2' | C3' | 111.5° | 112.3° |
| O2' | C2' | H2' | 111.0° | 108.6° |
| C1' | C2' | C3' | 103.2° | 102.0° |
| C1' | C2' | H2' | 109.8° | 111.1° |
| C2' | C1' | O4' | 107.1° | 106.5° |
| C2' | C1' | N1 | 110.4° | 112.5° |
| C2' | C1' | H1' | 109.2° | 112.6° |
| C3' | C2' | H2' | 109.7° | 110.1° |
| C2' | C3' | C4' | 102.9° | 102.1° |
| C2' | C3' | O3' | 108.4° | 110.3° |
| C2' | C3' | H3' | 112.0° | 114.0° |
| O4' | C1' | N1 | 111.4° | 109.0° |
| O4' | C1' | H1' | 109.3° | 108.9° |
| C1' | O4' | C4' | 109.7° | 109.2° |
| N1 | C1' | H1' | 109.3° | 107.3° |
| C1' | N1 | C6 | 121.2° | 118.6° |
| C1' | N1 | C2 | 117.2° | 121.3° |
| O4' | C4' | C5' | 111.5° | 108.2° |
| O4' | C4' | C3' | 104.9° | 105.9° |
| O4' | C4' | H4' | 109.4° | 107.7° |
| C5' | C4' | C3' | 111.2° | 113.3° |
| C5' | C4' | H4' | 109.8° | 109.3° |
| C4' | C5' | O5' | 111.7° | 108.6° |
| C4' | C5' | H5' | 109.0° | 110.1° |
| C4' | C5' | H5'' | 108.9° | 110.1° |
| C3' | C4' | H4' | 109.9° | 112.2° |
| C4' | C3' | O3' | 108.9° | 107.9° |
| C4' | C3' | H3' | 111.9° | 114.5° |
| O5' | C5' | H5' | 109.1° | 109.2° |
| O5' | C5' | H5'' | 109.1° | 109.3° |
| C5' | O5' | P | 120.4° | 119.7° |
| H5' | C5' | H5'' | 109.0° | 109.6° |
| O5' | P | S1P | 106.4° | 117.0° |
| O5' | P | OP2 | 108.0° | 103.0° |
| O5' | P | OP3 | 92.5° | 102.6° |
| S1P | P | OP2 | 123.6° | 115.8° |
| S1P | P | OP3 | 160.6° | 114.6° |
| OP2 | P | OP3 | 51.0° | 101.6° |
| P | OP2 | H2P | 108.1° | 118.8° |
| P | OP3 | H3P | 92.5° | 118.8° |
| O3' | C3' | H3' | 112.2° | 107.8° |
| C3' | O3' | HO3' | 108.4° | 106.4° |
| C6 | N1 | C2 | 121.6° | 120.1° |
| N1 | C6 | C5 | 121.2° | 124.1° |
| N1 | C6 | H6 | 119.3° | 115.5° |
| N1 | C2 | N3 | 116.1° | 115.2° |
| N1 | C2 | O2 | 122.1° | 123.7° |
| C5 | C6 | H6 | 119.4° | 120.5° |
| C6 | C5 | C4 | 120.9° | 119.3° |
| C6 | C5 | H5 | 119.6° | 121.9° |
| C4 | C5 | H5 | 119.5° | 118.8° |
| C5 | C4 | O4 | 125.3° | 120.9° |
| C5 | C4 | N3 | 114.0° | 114.6° |
| O4 | C4 | N3 | 120.7° | 124.5° |
| C4 | N3 | C2 | 126.2° | 126.8° |
| C4 | N3 | H3 | 116.9° | 116.6° |
| C2 | N3 | H3 | 116.9° | 116.6° |
| N3 | C2 | O2 | 121.8° | 121.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2' | C2' | C1' | C3' | 119.8° | 120.6° |
| O2' | C2' | C1' | H2' | 123.3° | 122.1° |
| O2' | C2' | C3' | H2' | 123.3° | 121.1° |
| O2' | C2' | C1' | O4' | 103.8° | 151.3° |
| O2' | C2' | C1' | N1 | 134.7° | 89.4° |
| O2' | C2' | C1' | H1' | 14.4° | 32.1° |
| O2' | C2' | C3' | C4' | 89.2° | 158.0° |
| O2' | C2' | C3' | O3' | 26.0° | 43.5° |
| O2' | C2' | C3' | H3' | 150.4° | 78.0° |
| HO2' | O2' | C2' | C1' | 14.4° | 54.3° |
| HO2' | O2' | C2' | C3' | 129.1° | 168.8° |
| HO2' | O2' | C2' | H2' | 108.3° | 69.2° |
| C1' | C2' | C3' | H2' | 117.0° | 118.0° |
| C2' | C1' | O4' | N1 | 120.8° | 121.6° |
| C2' | C1' | O4' | H1' | 118.2° | 121.6° |
| C2' | C1' | N1 | H1' | 120.2° | 124.4° |
| C2' | C1' | O4' | C4' | 6.2° | 11.3° |
| C1' | C2' | C3' | C4' | 30.5° | 37.1° |
| C1' | C2' | C3' | O3' | 145.7° | 77.4° |
| C1' | C2' | C3' | H3' | 89.9° | 161.1° |
| C2' | C1' | N1 | C6 | 86.7° | 85.6° |
| C2' | C1' | N1 | C2 | 92.4° | 94.3° |
| C3' | C2' | C1' | O4' | 16.0° | 30.7° |
| C3' | C2' | C1' | N1 | 105.5° | 150.0° |
| C3' | C2' | C1' | H1' | 134.3° | 88.5° |
| C2' | C3' | C4' | O4' | 35.0° | 31.5° |
| C2' | C3' | C4' | C5' | 155.7° | 86.9° |
| C2' | C3' | C4' | O3' | 114.9° | 116.3° |
| C2' | C3' | C4' | H3' | 120.4° | 123.7° |
| C2' | C3' | C4' | H4' | 82.5° | 148.7° |
| C2' | C3' | O3' | H3' | 124.2° | 125.1° |
| C2' | C3' | O3' | HO3' | 180.0° | 95.6° |
| H2' | C2' | C1' | O4' | 132.8° | 86.6° |
| H2' | C2' | C1' | N1 | 11.4° | 32.7° |
| H2' | C2' | C1' | H1' | 108.9° | 154.2° |
| H2' | C2' | C3' | C4' | 147.4° | 80.9° |
| H2' | C2' | C3' | O3' | 97.3° | 164.6° |
| H2' | C2' | C3' | H3' | 27.1° | 43.1° |
| O4' | C1' | N1 | H1' | 121.0° | 117.7° |
| C1' | O4' | C4' | C5' | 146.4° | 109.0° |
| C1' | O4' | C4' | C3' | 25.9° | 12.8° |
| C1' | O4' | C4' | H4' | 91.9° | 133.0° |
| O4' | C1' | N1 | C6 | 32.1° | 32.3° |
| O4' | C1' | N1 | C2 | 148.8° | 147.8° |
| N1 | C1' | O4' | C4' | 127.0° | 132.9° |
| C1' | N1 | C6 | C2 | 179.0° | 180.0° |
| C1' | N1 | C6 | C5 | 178.8° | 180.0° |
| C1' | N1 | C6 | H6 | 1.0° | 0.0° |
| C1' | N1 | C2 | N3 | 178.9° | 180.0° |
| C1' | N1 | C2 | O2 | 1.1° | 0.1° |
| H1' | C1' | O4' | C4' | 112.1° | 110.3° |
| H1' | C1' | N1 | C6 | 153.1° | 150.0° |
| H1' | C1' | N1 | C2 | 27.8° | 30.0° |
| O4' | C4' | C5' | C3' | 116.7° | 117.1° |
| O4' | C4' | C5' | H4' | 121.4° | 117.0° |
| O4' | C4' | C3' | H4' | 117.5° | 117.2° |
| O4' | C4' | C5' | O5' | 50.7° | 62.4° |
| O4' | C4' | C5' | H5' | 70.0° | 57.1° |
| O4' | C4' | C5' | H5'' | 171.2° | 178.0° |
| O4' | C4' | C3' | O3' | 149.9° | 84.7° |
| O4' | C4' | C3' | H3' | 85.4° | 155.2° |
| C5' | C4' | C3' | H4' | 121.9° | 124.4° |
| C4' | C5' | O5' | H5' | 120.6° | 120.1° |
| C4' | C5' | O5' | H5'' | 120.5° | 120.1° |
| C4' | C5' | H5' | H5'' | 118.8° | 121.2° |
| C4' | C5' | O5' | P | 158.5° | 180.0° |
| C5' | C4' | C3' | O3' | 89.4° | 156.8° |
| C5' | C4' | C3' | H3' | 35.2° | 36.8° |
| C3' | C4' | C5' | O5' | 66.1° | 179.5° |
| C3' | C4' | C5' | H5' | 173.3° | 60.0° |
| C3' | C4' | C5' | H5'' | 54.5° | 60.9° |
| C4' | C3' | O3' | H3' | 124.5° | 124.2° |
| C4' | C3' | O3' | HO3' | 68.7° | 15.2° |
| H4' | C4' | C5' | O5' | 172.0° | 54.6° |
| H4' | C4' | C5' | H5' | 51.4° | 174.1° |
| H4' | C4' | C5' | H5'' | 67.4° | 65.0° |
| H4' | C4' | C3' | O3' | 32.4° | 32.5° |
| H4' | C4' | C3' | H3' | 157.1° | 87.6° |
| O5' | C5' | H5' | H5'' | 119.0° | 119.6° |
| C5' | O5' | P | S1P | 25.0° | 68.4° |
| C5' | O5' | P | OP2 | 159.6° | 60.0° |
| C5' | O5' | P | OP3 | 150.8° | 165.2° |
| H5' | C5' | O5' | P | 38.0° | 59.9° |
| H5'' | C5' | O5' | P | 81.0° | 59.9° |
| O5' | P | S1P | OP2 | 125.7° | 121.9° |
| O5' | P | S1P | OP3 | 167.3° | 120.2° |
| O5' | P | OP2 | OP3 | 78.2° | 106.0° |
| O5' | P | OP2 | H2P | 180.0° | 52.7° |
| O5' | P | OP3 | H3P | 180.0° | 170.7° |
| S1P | P | OP2 | OP3 | 156.8° | 124.9° |
| S1P | P | OP2 | H2P | 55.0° | 178.3° |
| S1P | P | OP3 | H3P | 12.1° | 42.7° |
| OP2 | P | OP3 | H3P | 68.7° | 83.0° |
| OP3 | P | OP2 | H2P | 101.8° | 53.4° |
| H3' | C3' | O3' | HO3' | 55.7° | 139.4° |
| N1 | C6 | C5 | H6 | 179.9° | 180.0° |
| N1 | C6 | C5 | C4 | 0.2° | 0.0° |
| N1 | C6 | C5 | H5 | 179.8° | 180.0° |
| C6 | N1 | C2 | N3 | 0.2° | 0.0° |
| C6 | N1 | C2 | O2 | 179.9° | 180.0° |
| C2 | N1 | C6 | C5 | 0.2° | 0.0° |
| C2 | N1 | C6 | H6 | 179.9° | 180.0° |
| N1 | C2 | N3 | C4 | 0.2° | 0.0° |
| N1 | C2 | N3 | O2 | 179.9° | 179.9° |
| N1 | C2 | N3 | H3 | 179.9° | 180.0° |
| C6 | C5 | C4 | H5 | 180.0° | 180.0° |
| C6 | C5 | C4 | O4 | 179.9° | 180.0° |
| C6 | C5 | C4 | N3 | 0.2° | 0.0° |
| H6 | C6 | C5 | C4 | 179.9° | 180.0° |
| H6 | C6 | C5 | H5 | 0.1° | 0.0° |
| C5 | C4 | O4 | N3 | 179.7° | 180.0° |
| C5 | C4 | N3 | C2 | 0.2° | 0.0° |
| C5 | C4 | N3 | H3 | 179.9° | 180.0° |
| H5 | C5 | C4 | O4 | 0.1° | 0.0° |
| H5 | C5 | C4 | N3 | 179.8° | 180.0° |
| O4 | C4 | N3 | C2 | 179.9° | 180.0° |
| O4 | C4 | N3 | H3 | 0.1° | 0.0° |
| C4 | N3 | C2 | H3 | 179.9° | 180.0° |
| C4 | N3 | C2 | O2 | 179.9° | 180.0° |
| H3 | N3 | C2 | O2 | 0.1° | 0.0° |
