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SummaryGeometryRelated PDB entries

SOF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O01C02sing1.43Å1.46Å
O01C19sing1.36Å1.39Å
C02C03sing1.51Å1.59Å
C03O04doub1.21Å1.26Å
C03N05sing1.35Å1.42Å
N05C06sing1.47Å1.47Å
N05C18sing1.47Å1.48Å
C06C07sing1.53Å1.56Å
C07C08sing1.53Å1.54Å
C08N09sing1.47Å1.51Å
C08C17sing1.53Å1.55Å
N09C10sing1.47Å1.51Å
N09C14sing1.47Å1.52Å
C10C11sing1.53Å1.54Å
C11N12sing1.47Å1.48Å
N12C13sing1.47Å1.46Å
N12C15sing1.47Å1.48Å
C13C14sing1.53Å1.51Å
C15C16sing1.53Å1.53Å
C17C18sing1.54Å1.54Å
C19C20sing1.39Å1.42ÅAromatic
C19C24doub1.39Å1.40ÅAromatic
C20C21doub1.38Å1.44ÅAromatic
C21C22sing1.39Å1.40ÅAromatic
C22C23doub1.39Å1.41ÅAromatic
C22C25sing1.48Å1.47Å
C23C24sing1.38Å1.43ÅAromatic
C25C26sing1.39Å1.40ÅAromatic
C25C30doub1.39Å1.39ÅAromatic
C26C27doub1.38Å1.40ÅAromatic
C27C28sing1.38Å1.38ÅAromatic
C28C29doub1.38Å1.41ÅAromatic
C29C30sing1.38Å1.40ÅAromatic
C02H021sing1.09Å1.10Å
C02H022sing1.09Å1.10Å
C06H061sing1.09Å1.10Å
C06H062sing1.09Å1.10Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
C07H071sing1.09Å1.10Å
C07H072sing1.09Å1.10Å
C08H08sing1.09Å1.10Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C15HA1sing1.09Å1.10Å
C15HB2sing1.09Å1.10Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C16H163sing1.09Å1.10Å
C20H20sing1.08Å1.08Å
C24H24sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
C30H30sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
C29H29sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C02O01C19117.8°117.0°
O01C02C03118.3°109.5°
O01C02H021107.2°109.4°
O01C02H022107.2°109.5°
O01C19C20121.0°119.9°
O01C19C24122.5°120.0°
C02C03O04116.3°120.0°
C02C03N05124.5°120.0°
C03C02H021107.2°109.5°
C03C02H022107.2°109.5°
O04C03N05119.2°120.0°
C03N05C06126.7°120.6°
C03N05C18123.6°120.6°
C06N05C18109.6°118.7°
N05C06C07112.8°108.8°
N05C06H061108.7°109.6°
N05C06H062108.7°109.6°
N05C18C17113.0°108.5°
N05C18H181108.6°109.5°
N05C18H182108.6°109.6°
C06C07C08112.8°109.3°
C07C06H061108.6°109.6°
C07C06H062108.6°109.5°
C06C07H071108.7°109.5°
C06C07H072108.6°109.5°
C07C08N09108.4°109.5°
C07C08C17108.4°109.5°
C08C07H071108.6°109.5°
C08C07H072108.7°109.5°
C07C08H08108.4°109.4°
N09C08C17114.3°109.5°
C08N09C10107.4°111.0°
C08N09C14116.5°111.0°
N09C08H08108.8°109.5°
C08C17C18113.4°109.3°
C17C08H08108.4°109.5°
C08C17H171108.5°109.5°
C08C17H172108.5°109.5°
C10N09C14107.7°110.9°
N09C10C11117.1°109.4°
N09C10H101107.5°109.5°
N09C10H102107.5°109.5°
N09C14C13116.6°109.3°
N09C14H141107.7°109.5°
N09C14H142107.7°109.5°
C10C11N12108.0°109.3°
C11C10H101107.5°109.5°
C11C10H102107.5°109.5°
C10C11H111109.9°109.5°
C10C11H112109.8°109.5°
C11N12C13106.7°110.8°
C11N12C15108.3°111.0°
N12C11H111109.8°109.5°
N12C11H112109.8°109.4°
C13N12C15105.9°111.0°
N12C13C14106.9°109.4°
N12C13H131110.1°109.5°
N12C13H132110.1°109.5°
N12C15C16104.9°109.5°
N12C15HA1110.6°109.5°
N12C15HB2110.6°109.5°
C13C14H141107.7°109.5°
C13C14H142107.7°109.5°
C14C13H131110.1°109.5°
C14C13H132110.1°109.4°
C16C15HA1110.6°109.5°
C16C15HB2110.6°109.5°
C15C16H161109.5°109.4°
C15C16H162109.5°109.5°
C15C16H163109.5°109.5°
C17C18H181108.6°109.8°
C17C18H182108.6°109.7°
C18C17H171108.5°109.7°
C18C17H172108.5°109.4°
C20C19C24116.5°120.1°
C19C20C21121.6°120.0°
C19C20H20119.2°120.0°
C19C24C23121.0°120.1°
C19C24H24119.5°120.0°
C20C21C22122.0°119.9°
C21C20H20119.2°120.0°
C20C21H21119.0°120.0°
C21C22C23115.5°119.9°
C21C22C25121.9°120.1°
C22C21H21119.0°120.0°
C23C22C25122.6°120.1°
C22C23C24123.4°119.9°
C22C23H23118.3°120.0°
C22C25C26120.3°120.1°
C22C25C30122.1°120.1°
C23C24H24119.5°120.0°
C24C23H23118.3°120.0°
C26C25C30117.6°119.8°
C25C26C27122.7°119.9°
C25C26H26118.6°120.1°
C25C30C29120.5°119.9°
C25C30H30119.7°120.0°
C26C27C28119.2°120.1°
C27C26H26118.6°120.0°
C26C27H27120.4°119.9°
C27C28C29118.9°120.2°
C28C27H27120.4°120.0°
C27C28H28120.5°119.8°
C28C29C30121.1°120.2°
C29C28H28120.6°120.0°
C28C29H29119.5°119.9°
C29C30H30119.8°120.1°
C30C29H29119.5°119.9°
H021C02H022109.5°109.4°
H061C06H062109.5°109.7°
H181C18H182109.5°109.7°
H071C07H072109.4°109.5°
H171C17H172109.5°109.5°
H101C10H102109.5°109.5°
H141C14H142109.4°109.5°
H111C11H112109.5°109.5°
H131C13H132109.5°109.5°
HA1C15HB2109.5°109.5°
H161C16H162109.5°109.4°
H161C16H163109.5°109.5°
H162C16H163109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01C02C03H021121.3°120.0°
O01C02C03H022121.3°120.0°
O01C02C03O0418.5°0.0°
O01C02C03N05161.3°180.0°
C02O01C19C2056.9°180.0°
C02O01C19C24121.0°0.2°
O01C02H021H022116.0°120.0°
C19O01C02C03123.3°180.0°
O01C19C20C24178.1°179.8°
O01C19C20C21178.6°180.0°
O01C19C24C23178.7°179.7°
C19O01C02H021115.4°60.0°
C19O01C02H0222.1°59.9°
O01C19C20H201.4°0.0°
O01C19C24H241.4°0.0°
C02C03O04N05179.8°180.0°
C02C03N05C06178.6°180.0°
C02C03N05C180.1°0.2°
C03C02H021H022115.9°120.0°
O04C03N05C061.2°0.0°
O04C03N05C18179.7°179.8°
O04C03C02H021139.7°120.0°
O04C03C02H022102.8°120.0°
C03N05C06C18178.6°179.8°
C03N05C06C07121.3°126.4°
C03N05C18C17121.6°126.3°
N05C03C02H02140.1°60.0°
N05C03C02H02277.4°60.0°
C03N05C06H061118.3°6.6°
C03N05C06H0620.8°113.9°
C03N05C18H1811.1°113.8°
C03N05C18H182117.9°6.6°
N05C06C07H061120.5°119.8°
N05C06C07H062120.5°119.8°
N05C06C07C0855.8°54.6°
C06N05C18C1757.0°53.9°
N05C06H061H062118.5°120.4°
C06N05C18H181177.5°66.0°
C06N05C18H18263.5°173.6°
N05C06C07H071176.4°65.4°
N05C06C07H07264.7°174.6°
C18N05C06C0757.3°53.8°
N05C18C17C0855.0°54.9°
N05C18C17H181120.5°119.7°
N05C18C17H182120.5°119.7°
C18N05C06H06163.1°173.6°
C18N05C06H062177.8°65.9°
N05C18H181H182118.4°120.3°
N05C18C17H171175.6°65.1°
N05C18C17H17265.5°174.7°
C06C07C08H071120.5°119.9°
C06C07C08H072120.5°120.0°
C06C07C08N0974.9°178.6°
C06C07C08C1749.7°61.3°
C07C06H061H062118.5°120.3°
C06C07H071H072118.5°120.0°
C06C07C08H08167.1°58.7°
C07C08N09C17121.0°120.1°
C07C08N09H08117.7°119.9°
C07C08C17H08117.5°120.0°
C07C08N09C1087.5°175.0°
C07C08N09C14151.7°61.2°
C07C08C17C1849.6°61.5°
C08C07C06H06164.7°174.4°
C08C07C06H062176.4°65.2°
C08C07H071H072118.5°120.1°
C07C08C17H171170.2°58.6°
C07C08C17H17271.0°178.7°
N09C08C17H08121.5°120.0°
C08N09C10C14126.3°123.8°
C08N09C10C1185.9°176.8°
C08N09C14C1376.8°176.8°
N09C08C17C1871.4°178.5°
N09C08C07H07145.6°61.5°
N09C08C07H072164.6°58.6°
N09C08C17H17149.1°61.4°
N09C08C17H172168.0°58.7°
C08N09C10H101153.1°56.8°
C08N09C10H10235.2°63.2°
C08N09C14H14144.3°63.2°
C08N09C14H142162.2°56.9°
C17C08N09C10151.5°65.0°
C17C08N09C1430.7°58.8°
C08C17C18H171120.6°120.0°
C08C17C18H172120.6°119.8°
C08C17C18H181175.5°64.8°
C08C17C18H18265.5°174.5°
C17C08C07H071170.2°58.6°
C17C08C07H07270.9°178.7°
C08C17H171H172118.2°120.1°
N09C10C11H101121.1°120.0°
N09C10C11H102121.1°120.0°
N09C10C11N1253.4°58.4°
C10N09C14C1343.9°59.3°
C10N09C08H0830.3°55.0°
N09C10H101H102116.5°120.1°
C10N09C14H141165.0°60.7°
C10N09C14H14277.2°179.3°
N09C10C11H111173.2°61.5°
N09C10C11H11266.4°178.3°
C14N09C10C1140.4°59.3°
N09C14C13N1260.3°58.5°
N09C14C13H141121.0°120.0°
N09C14C13H142121.1°119.9°
C14N09C08H0890.5°178.8°
C14N09C10H10180.7°179.3°
C14N09C10H102161.5°60.6°
N09C14H141H142116.7°120.0°
N09C14C13H131179.9°61.6°
N09C14C13H13259.3°178.4°
C10C11N12H111119.8°120.0°
C10C11N12H112119.8°120.0°
C10C11N12C1366.0°59.3°
C10C11N12C15179.6°64.6°
C11C10H101H102116.5°120.0°
C10C11H111H112120.7°120.2°
C11N12C13C15115.3°123.9°
C11N12C13C1469.2°59.4°
C11N12C15C16137.2°170.0°
N12C11C10H10167.7°178.4°
N12C11C10H102174.5°61.6°
N12C11H111H112120.6°120.0°
C11N12C13H131171.2°60.6°
C11N12C13H13250.4°179.3°
C11N12C15HA117.9°50.0°
C11N12C15HB2103.5°70.0°
N12C13C14H131119.6°120.0°
N12C13C14H132119.6°119.9°
C13N12C15C16108.6°66.2°
N12C13C14H141178.7°61.5°
N12C13C14H14260.8°178.4°
C13N12C11H111174.2°60.6°
C13N12C11H11253.7°179.3°
N12C13H131H132121.2°120.1°
C13N12C15HA1132.1°173.8°
C13N12C15HB210.7°53.8°
C15N12C13C14175.5°64.5°
N12C15C16HA1119.3°120.0°
N12C15C16HB2119.3°120.0°
C15N12C11H11160.5°175.5°
C15N12C11H11259.9°55.4°
C15N12C13H13156.0°175.5°
C15N12C13H13264.9°55.4°
N12C15HA1HB2122.1°120.0°
N12C15C16H161180.0°60.0°
N12C15C16H16260.0°60.0°
N12C15C16H16360.0°180.0°
C13C14H141H142116.8°120.1°
C14C13H131H132121.2°120.0°
C16C15HA1HB2122.2°120.0°
C15C16H161H162120.0°120.0°
C15C16H161H163120.0°120.0°
C15C16H162H163120.0°120.1°
C17C18H181H182118.4°120.6°
C18C17C08H08167.1°58.5°
C18C17H171H172118.2°120.1°
C19C20C21H20180.0°180.0°
C19C20C21C220.0°0.0°
C20C19C24C230.6°0.5°
C20C19C24H24179.4°179.8°
C19C20C21H21180.0°180.0°
C24C19C20C210.6°0.2°
C19C24C23C220.2°0.5°
C19C24C23H24180.0°179.8°
C24C19C20H20179.4°179.8°
C19C24C23H23179.8°179.8°
C20C21C22H21180.0°180.0°
C20C21C22C230.4°0.0°
C20C21C22C25179.7°180.0°
C21C22C23C25179.3°180.0°
C21C22C23C240.3°0.3°
C21C22C25C2685.5°180.0°
C21C22C25C3095.3°0.3°
C22C21C20H20180.0°180.0°
C21C22C23H23179.7°180.0°
C22C23C24H23180.0°179.7°
C23C22C25C2693.7°0.0°
C23C22C25C3085.5°179.7°
C22C23C24H24179.8°179.7°
C23C22C21H21179.6°180.0°
C25C22C23C24179.6°179.7°
C22C25C26C30179.2°179.7°
C22C25C26C27179.7°180.0°
C22C25C30C29179.8°179.8°
C25C22C21H210.3°0.0°
C25C22C23H230.4°0.0°
C22C25C26H260.3°0.0°
C22C25C30H300.2°0.0°
C25C26C27H26180.0°180.0°
C25C26C27C280.2°0.0°
C26C25C30C290.5°0.5°
C26C25C30H30179.5°179.7°
C25C26C27H27179.8°180.0°
C30C25C26C270.5°0.3°
C25C30C29C280.3°0.5°
C25C30C29H30180.0°179.8°
C30C25C26H26179.6°179.7°
C25C30C29H29179.7°179.7°
C26C27C28H27180.0°180.0°
C26C27C28C290.0°0.1°
C26C27C28H28180.0°180.0°
C27C28C29H28180.0°180.0°
C27C28C29C300.0°0.2°
C28C27C26H26179.9°180.0°
C27C28C29H29180.0°180.0°
C28C29C30H29180.0°179.8°
C28C29C30H30179.7°179.7°
C29C28C27H27180.0°180.0°
C30C29C28H28179.9°179.8°
H061C06C07H07155.8°54.4°
H061C06C07H072174.8°65.6°
H062C06C07H07163.1°174.9°
H062C06C07H07255.8°54.9°
H181C18C17H17163.9°175.2°
H181C18C17H17255.0°55.0°
H182C18C17H17155.1°54.5°
H182C18C17H172173.9°65.6°
H071C07C08H0872.4°178.6°
H072C07C08H0846.6°61.3°
H08C08C17H17172.3°178.6°
H08C08C17H17246.5°61.3°
H101C10C11H11152.1°58.5°
H101C10C11H112172.5°61.7°
H102C10C11H11165.7°178.5°
H102C10C11H11254.7°58.3°
H141C14C13H13159.1°178.5°
H141C14C13H13261.7°58.4°
H142C14C13H13158.8°58.3°
H142C14C13H132179.6°61.7°
HA1C15C16H16160.7°180.0°
HA1C15C16H162179.3°60.0°
HA1C15C16H16359.3°60.0°
HB2C15C16H16160.8°60.0°
HB2C15C16H16259.3°180.0°
HB2C15C16H163179.3°60.0°
H161C16H162H163120.0°120.0°
H20C20C21H210.0°0.0°
H24C24C23H230.2°0.0°
H26C26C27H270.2°0.0°
H30C30C29H290.3°0.1°
H27C27C28H280.0°0.0°
H28C28C29H290.0°0.0°

249697

PDB entries from 2026-02-25

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