RDR
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O15 | C10 | sing | 1.43Å | 1.42Å | |
O15 | H15 | sing | 0.97Å | 0.95Å | |
C10 | C6 | sing | 1.53Å | 1.55Å | |
C10 | H101 | sing | 1.09Å | 1.12Å | |
C10 | H102 | sing | 1.09Å | 1.12Å | |
C6 | N2 | sing | 1.47Å | 1.50Å | |
C6 | H61 | sing | 1.09Å | 1.12Å | |
C6 | H62 | sing | 1.09Å | 1.11Å | |
N2 | C5 | sing | 1.37Å | 1.41Å | Aromatic |
N2 | C1 | sing | 1.37Å | 1.38Å | Aromatic |
C5 | C7 | doub | 1.41Å | 1.43Å | Aromatic |
C5 | C9 | sing | 1.39Å | 1.40Å | Aromatic |
C7 | C11 | sing | 1.39Å | 1.40Å | Aromatic |
C7 | C3 | sing | 1.46Å | 1.44Å | Aromatic |
C11 | N16 | doub | 1.32Å | 1.38Å | Aromatic |
C11 | H11 | sing | 1.08Å | 1.10Å | |
N16 | C14 | sing | 1.32Å | 1.36Å | Aromatic |
C14 | C9 | doub | 1.38Å | 1.41Å | Aromatic |
C14 | H14 | sing | 1.08Å | 1.10Å | |
C9 | H9 | sing | 1.08Å | 1.10Å | |
C3 | C1 | doub | 1.34Å | 1.41Å | Aromatic |
C3 | H3 | sing | 1.08Å | 1.10Å | |
C1 | C4 | sing | 1.51Å | 1.54Å | |
C4 | N8 | sing | 1.46Å | 1.49Å | |
C4 | H41 | sing | 1.09Å | 1.12Å | |
C4 | H42 | sing | 1.09Å | 1.12Å | |
N8 | C12 | sing | 1.33Å | 1.39Å | |
N8 | C13 | sing | 1.46Å | 1.50Å | |
C12 | O18 | doub | 1.21Å | 1.22Å | |
C12 | C17 | sing | 1.50Å | 1.55Å | |
C17 | N20 | sing | 1.47Å | 1.48Å | |
C17 | H171 | sing | 1.09Å | 1.11Å | |
C17 | H172 | sing | 1.09Å | 1.11Å | |
N20 | C19 | sing | 1.47Å | 1.48Å | |
N20 | S21 | sing | 1.66Å | 1.78Å | |
C19 | C13 | sing | 1.53Å | 1.54Å | |
C19 | H191 | sing | 1.09Å | 1.11Å | |
C19 | H192 | sing | 1.09Å | 1.12Å | |
C13 | H131 | sing | 1.09Å | 1.11Å | |
C13 | H132 | sing | 1.09Å | 1.12Å | |
S21 | O23 | doub | 1.42Å | 1.44Å | |
S21 | O24 | doub | 1.42Å | 1.44Å | |
S21 | C22 | sing | 1.76Å | 1.72Å | |
C22 | C25 | doub | 1.34Å | 1.41Å | Aromatic |
C22 | S26 | sing | 1.78Å | 1.70Å | Aromatic |
C25 | C27 | sing | 1.46Å | 1.46Å | Aromatic |
C25 | H25 | sing | 1.08Å | 1.10Å | |
C27 | C28 | doub | 1.41Å | 1.45Å | Aromatic |
C27 | C29 | sing | 1.41Å | 1.40Å | Aromatic |
C28 | S26 | sing | 1.77Å | 1.70Å | Aromatic |
C28 | C30 | sing | 1.38Å | 1.39Å | Aromatic |
C30 | C32 | doub | 1.38Å | 1.41Å | Aromatic |
C30 | H30 | sing | 1.08Å | 1.10Å | |
C32 | CL33 | sing | 1.74Å | 1.72Å | |
C32 | C31 | sing | 1.39Å | 1.41Å | Aromatic |
C31 | C29 | doub | 1.36Å | 1.42Å | Aromatic |
C31 | H31 | sing | 1.08Å | 1.10Å | |
C29 | H29 | sing | 1.08Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C10 | O15 | H15 | 108.5° | 106.8° |
O15 | C10 | C6 | 108.5° | 109.4° |
O15 | C10 | H101 | 112.6° | 109.5° |
O15 | C10 | H102 | 112.6° | 109.5° |
C6 | C10 | H101 | 112.6° | 109.5° |
C6 | C10 | H102 | 112.6° | 109.5° |
C10 | C6 | N2 | 114.0° | 109.5° |
C10 | C6 | H61 | 110.5° | 109.5° |
C10 | C6 | H62 | 110.5° | 109.5° |
H101 | C10 | H102 | 97.9° | 109.5° |
N2 | C6 | H61 | 110.6° | 109.5° |
N2 | C6 | H62 | 110.6° | 109.4° |
C6 | N2 | C5 | 121.4° | 125.1° |
C6 | N2 | C1 | 129.2° | 125.0° |
H61 | C6 | H62 | 99.7° | 109.5° |
C5 | N2 | C1 | 109.4° | 109.9° |
N2 | C5 | C7 | 107.3° | 107.2° |
N2 | C5 | C9 | 133.3° | 134.6° |
N2 | C1 | C3 | 109.4° | 109.9° |
N2 | C1 | C4 | 122.1° | 125.0° |
C7 | C5 | C9 | 119.4° | 118.2° |
C5 | C7 | C11 | 118.7° | 119.1° |
C5 | C7 | C3 | 107.2° | 106.0° |
C5 | C9 | C14 | 118.6° | 118.8° |
C5 | C9 | H9 | 120.4° | 120.6° |
C11 | C7 | C3 | 134.1° | 134.9° |
C7 | C11 | N16 | 121.8° | 120.1° |
C7 | C11 | H11 | 119.9° | 119.9° |
C7 | C3 | C1 | 106.7° | 106.9° |
C7 | C3 | H3 | 127.5° | 126.6° |
N16 | C11 | H11 | 118.3° | 119.9° |
C11 | N16 | C14 | 119.5° | 122.2° |
N16 | C14 | C9 | 122.0° | 121.5° |
N16 | C14 | H14 | 117.2° | 119.2° |
C9 | C14 | H14 | 120.8° | 119.2° |
C14 | C9 | H9 | 121.0° | 120.6° |
C1 | C3 | H3 | 125.8° | 126.5° |
C3 | C1 | C4 | 128.5° | 125.0° |
C1 | C4 | N8 | 118.5° | 109.4° |
C1 | C4 | H41 | 109.0° | 109.5° |
C1 | C4 | H42 | 108.9° | 109.5° |
N8 | C4 | H41 | 109.0° | 109.5° |
N8 | C4 | H42 | 109.0° | 109.5° |
C4 | N8 | C12 | 119.2° | 117.7° |
C4 | N8 | C13 | 117.7° | 117.7° |
H41 | C4 | H42 | 101.1° | 109.5° |
C12 | N8 | C13 | 123.1° | 124.5° |
N8 | C12 | O18 | 123.6° | 118.4° |
N8 | C12 | C17 | 116.8° | 123.1° |
N8 | C13 | C19 | 114.3° | 110.8° |
N8 | C13 | H131 | 110.4° | 109.2° |
N8 | C13 | H132 | 110.4° | 109.2° |
O18 | C12 | C17 | 119.6° | 118.5° |
C12 | C17 | N20 | 116.1° | 108.9° |
C12 | C17 | H171 | 109.7° | 109.7° |
C12 | C17 | H172 | 109.8° | 109.4° |
N20 | C17 | H171 | 109.8° | 109.6° |
N20 | C17 | H172 | 109.8° | 109.6° |
C17 | N20 | C19 | 109.5° | 117.3° |
C17 | N20 | S21 | 113.5° | 121.3° |
H171 | C17 | H172 | 100.4° | 109.7° |
C19 | N20 | S21 | 114.0° | 121.4° |
N20 | C19 | C13 | 110.7° | 108.2° |
N20 | C19 | H191 | 111.8° | 109.7° |
N20 | C19 | H192 | 111.8° | 109.7° |
N20 | S21 | O23 | 105.1° | 105.8° |
N20 | S21 | O24 | 103.2° | 105.8° |
N20 | S21 | C22 | 109.9° | 107.4° |
C13 | C19 | H191 | 111.7° | 109.7° |
C13 | C19 | H192 | 111.7° | 109.8° |
C19 | C13 | H131 | 110.5° | 109.2° |
C19 | C13 | H132 | 110.5° | 109.2° |
H191 | C19 | H192 | 98.7° | 109.8° |
H131 | C13 | H132 | 99.8° | 109.1° |
O23 | S21 | O24 | 119.4° | 125.3° |
O23 | S21 | C22 | 109.7° | 105.8° |
O24 | S21 | C22 | 109.1° | 105.7° |
S21 | C22 | C25 | 120.5° | 128.2° |
S21 | C22 | S26 | 126.9° | 128.2° |
C25 | C22 | S26 | 112.6° | 103.5° |
C22 | C25 | C27 | 111.9° | 119.3° |
C22 | C25 | H25 | 122.5° | 120.3° |
C22 | S26 | C28 | 93.8° | 98.9° |
C27 | C25 | H25 | 125.6° | 120.3° |
C25 | C27 | C28 | 110.2° | 114.6° |
C25 | C27 | C29 | 129.7° | 128.8° |
C28 | C27 | C29 | 120.1° | 116.6° |
C27 | C28 | S26 | 111.5° | 103.6° |
C27 | C28 | C30 | 119.3° | 122.1° |
C27 | C29 | C31 | 120.7° | 120.8° |
C27 | C29 | H29 | 118.9° | 119.6° |
S26 | C28 | C30 | 129.2° | 134.3° |
C28 | C30 | C32 | 119.8° | 119.5° |
C28 | C30 | H30 | 119.3° | 120.3° |
C32 | C30 | H30 | 120.9° | 120.2° |
C30 | C32 | CL33 | 119.0° | 120.3° |
C30 | C32 | C31 | 121.6° | 119.5° |
CL33 | C32 | C31 | 119.4° | 120.2° |
C32 | C31 | C29 | 118.5° | 121.5° |
C32 | C31 | H31 | 120.7° | 119.3° |
C29 | C31 | H31 | 120.8° | 119.3° |
C31 | C29 | H29 | 120.4° | 119.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O15 | C10 | C6 | H101 | 125.3° | 120.0° |
O15 | C10 | C6 | H102 | 125.3° | 120.0° |
O15 | C10 | H101 | H102 | 118.5° | 120.0° |
O15 | C10 | C6 | N2 | 69.5° | 175.0° |
O15 | C10 | C6 | H61 | 165.2° | 64.9° |
O15 | C10 | C6 | H62 | 55.8° | 55.1° |
H15 | O15 | C10 | C6 | 180.0° | 180.0° |
H15 | O15 | C10 | H101 | 54.7° | 60.0° |
H15 | O15 | C10 | H102 | 54.7° | 60.0° |
C6 | C10 | H101 | H102 | 118.5° | 120.0° |
C10 | C6 | N2 | H61 | 125.2° | 120.0° |
C10 | C6 | N2 | H62 | 125.3° | 119.9° |
C10 | C6 | H61 | H62 | 116.3° | 120.0° |
C10 | C6 | N2 | C5 | 88.0° | 85.7° |
C10 | C6 | N2 | C1 | 92.0° | 94.6° |
H101 | C10 | C6 | N2 | 55.7° | 55.0° |
H101 | C10 | C6 | H61 | 69.5° | 175.1° |
H101 | C10 | C6 | H62 | 179.0° | 64.9° |
H102 | C10 | C6 | N2 | 165.2° | 65.0° |
H102 | C10 | C6 | H61 | 39.9° | 55.1° |
H102 | C10 | C6 | H62 | 69.5° | 175.1° |
N2 | C6 | H61 | H62 | 116.4° | 119.9° |
C6 | N2 | C5 | C1 | 180.0° | 179.7° |
C6 | N2 | C5 | C7 | 179.9° | 179.9° |
C6 | N2 | C5 | C9 | 0.3° | 0.8° |
C6 | N2 | C1 | C3 | 179.8° | 180.0° |
C6 | N2 | C1 | C4 | 0.1° | 0.0° |
H61 | C6 | N2 | C5 | 37.3° | 154.2° |
H61 | C6 | N2 | C1 | 142.7° | 25.5° |
H62 | C6 | N2 | C5 | 146.8° | 34.2° |
H62 | C6 | N2 | C1 | 33.2° | 145.5° |
N2 | C5 | C7 | C9 | 179.8° | 179.3° |
N2 | C5 | C7 | C11 | 180.0° | 179.8° |
N2 | C5 | C7 | C3 | 0.1° | 0.4° |
N2 | C5 | C9 | C14 | 179.8° | 179.6° |
N2 | C5 | C9 | H9 | 0.2° | 0.7° |
C5 | N2 | C1 | C3 | 0.2° | 0.3° |
C5 | N2 | C1 | C4 | 180.0° | 179.7° |
C1 | N2 | C5 | C7 | 0.1° | 0.4° |
C1 | N2 | C5 | C9 | 179.7° | 179.5° |
N2 | C1 | C3 | C7 | 0.2° | 0.0° |
N2 | C1 | C3 | C4 | 179.8° | 180.0° |
N2 | C1 | C3 | H3 | 179.8° | 180.0° |
N2 | C1 | C4 | N8 | 142.4° | 154.7° |
N2 | C1 | C4 | H41 | 17.1° | 34.7° |
N2 | C1 | C4 | H42 | 92.3° | 85.2° |
C5 | C7 | C11 | C3 | 180.0° | 179.7° |
C5 | C7 | C11 | N16 | 0.2° | 0.3° |
C5 | C7 | C11 | H11 | 179.8° | 179.8° |
C7 | C5 | C9 | C14 | 0.0° | 0.5° |
C7 | C5 | C9 | H9 | 180.0° | 179.7° |
C5 | C7 | C3 | C1 | 0.2° | 0.2° |
C5 | C7 | C3 | H3 | 179.8° | 179.8° |
C9 | C5 | C7 | C11 | 0.1° | 0.6° |
C9 | C5 | C7 | C3 | 179.9° | 179.6° |
C5 | C9 | C14 | N16 | 0.1° | 0.3° |
C5 | C9 | C14 | H9 | 180.0° | 179.7° |
C5 | C9 | C14 | H14 | 179.8° | 179.7° |
C7 | C11 | N16 | H11 | 180.0° | 179.9° |
C7 | C11 | N16 | C14 | 0.0° | 0.0° |
C11 | C7 | C3 | C1 | 179.9° | 179.9° |
C11 | C7 | C3 | H3 | 0.1° | 0.0° |
C3 | C7 | C11 | N16 | 179.9° | 180.0° |
C3 | C7 | C11 | H11 | 0.1° | 0.1° |
C7 | C3 | C1 | H3 | 180.0° | 180.0° |
C7 | C3 | C1 | C4 | 180.0° | 179.9° |
C11 | N16 | C14 | C9 | 0.1° | 0.0° |
C11 | N16 | C14 | H14 | 179.8° | 180.0° |
H11 | C11 | N16 | C14 | 180.0° | 179.9° |
N16 | C14 | C9 | H14 | 179.9° | 180.0° |
N16 | C14 | C9 | H9 | 179.9° | 180.0° |
H14 | C14 | C9 | H9 | 0.2° | 0.0° |
C3 | C1 | C4 | N8 | 37.8° | 25.3° |
C3 | C1 | C4 | H41 | 163.1° | 145.3° |
C3 | C1 | C4 | H42 | 87.5° | 94.7° |
H3 | C3 | C1 | C4 | 0.1° | 0.0° |
C1 | C4 | N8 | H41 | 125.3° | 120.0° |
C1 | C4 | N8 | H42 | 125.3° | 120.0° |
C1 | C4 | H41 | H42 | 114.6° | 120.0° |
C1 | C4 | N8 | C12 | 127.8° | 95.6° |
C1 | C4 | N8 | C13 | 52.6° | 84.8° |
N8 | C4 | H41 | H42 | 114.7° | 120.1° |
C4 | N8 | C12 | C13 | 179.6° | 179.5° |
C4 | N8 | C12 | O18 | 0.2° | 4.7° |
C4 | N8 | C12 | C17 | 179.9° | 175.9° |
C4 | N8 | C13 | C19 | 168.1° | 158.0° |
C4 | N8 | C13 | H131 | 42.8° | 81.6° |
C4 | N8 | C13 | H132 | 66.6° | 37.6° |
H41 | C4 | N8 | C12 | 106.9° | 144.4° |
H41 | C4 | N8 | C13 | 72.7° | 35.2° |
H42 | C4 | N8 | C12 | 2.5° | 24.3° |
H42 | C4 | N8 | C13 | 177.8° | 155.2° |
N8 | C12 | O18 | C17 | 179.7° | 179.5° |
N8 | C12 | C17 | N20 | 20.2° | 12.2° |
N8 | C12 | C17 | H171 | 145.4° | 132.1° |
N8 | C12 | C17 | H172 | 105.1° | 107.6° |
C12 | N8 | C13 | C19 | 12.3° | 21.5° |
C12 | N8 | C13 | H131 | 137.6° | 98.9° |
C12 | N8 | C13 | H132 | 113.0° | 141.9° |
C13 | N8 | C12 | O18 | 179.8° | 175.8° |
C13 | N8 | C12 | C17 | 0.5° | 3.6° |
N8 | C13 | C19 | N20 | 43.0° | 46.7° |
N8 | C13 | C19 | H131 | 125.3° | 120.3° |
N8 | C13 | C19 | H132 | 125.2° | 120.4° |
N8 | C13 | C19 | H191 | 168.3° | 73.0° |
N8 | C13 | C19 | H192 | 82.2° | 166.3° |
N8 | C13 | H131 | H132 | 116.2° | 119.3° |
O18 | C12 | C17 | N20 | 160.1° | 167.3° |
O18 | C12 | C17 | H171 | 34.9° | 47.3° |
O18 | C12 | C17 | H172 | 74.6° | 73.0° |
C12 | C17 | N20 | H171 | 125.2° | 120.0° |
C12 | C17 | N20 | H172 | 125.3° | 119.6° |
C12 | C17 | H171 | H172 | 115.6° | 120.2° |
C12 | C17 | N20 | C19 | 51.1° | 42.5° |
C12 | C17 | N20 | S21 | 179.7° | 137.5° |
N20 | C17 | H171 | H172 | 115.6° | 120.3° |
C17 | N20 | C19 | S21 | 128.4° | 179.9° |
C17 | N20 | C19 | C13 | 61.9° | 61.5° |
C17 | N20 | C19 | H191 | 172.9° | 58.2° |
C17 | N20 | C19 | H192 | 63.4° | 178.8° |
C17 | N20 | S21 | O23 | 45.9° | 22.7° |
C17 | N20 | S21 | O24 | 171.7° | 157.5° |
C17 | N20 | S21 | C22 | 72.0° | 90.0° |
H171 | C17 | N20 | C19 | 176.3° | 162.6° |
H171 | C17 | N20 | S21 | 55.1° | 17.5° |
H172 | C17 | N20 | C19 | 74.1° | 77.1° |
H172 | C17 | N20 | S21 | 54.5° | 102.8° |
N20 | C19 | C13 | H191 | 125.2° | 119.7° |
N20 | C19 | C13 | H192 | 125.3° | 119.7° |
N20 | C19 | H191 | H192 | 117.7° | 120.6° |
N20 | C19 | C13 | H131 | 168.3° | 73.6° |
N20 | C19 | C13 | H132 | 82.2° | 167.1° |
C19 | N20 | S21 | O23 | 172.2° | 157.4° |
C19 | N20 | S21 | O24 | 62.0° | 22.6° |
C19 | N20 | S21 | C22 | 54.2° | 90.0° |
S21 | N20 | C19 | C13 | 169.8° | 118.6° |
S21 | N20 | C19 | H191 | 44.6° | 121.8° |
S21 | N20 | C19 | H192 | 65.0° | 1.1° |
N20 | S21 | O23 | O24 | 115.0° | 123.1° |
N20 | S21 | O23 | C22 | 118.1° | 113.8° |
N20 | S21 | O24 | C22 | 116.8° | 113.8° |
N20 | S21 | C22 | C25 | 86.4° | 89.7° |
N20 | S21 | C22 | S26 | 92.8° | 90.0° |
C13 | C19 | H191 | H192 | 117.6° | 120.7° |
C19 | C13 | H131 | H132 | 116.3° | 119.4° |
H191 | C19 | C13 | H131 | 66.5° | 166.7° |
H191 | C19 | C13 | H132 | 43.1° | 47.4° |
H192 | C19 | C13 | H131 | 43.0° | 46.0° |
H192 | C19 | C13 | H132 | 152.6° | 73.3° |
O23 | S21 | O24 | C22 | 127.2° | 123.1° |
O23 | S21 | C22 | C25 | 28.7° | 23.0° |
O23 | S21 | C22 | S26 | 152.2° | 157.3° |
O24 | S21 | C22 | C25 | 161.2° | 157.7° |
O24 | S21 | C22 | S26 | 19.7° | 22.6° |
S21 | C22 | C25 | S26 | 179.2° | 179.7° |
S21 | C22 | C25 | C27 | 178.8° | 179.9° |
S21 | C22 | C25 | H25 | 1.1° | 0.1° |
S21 | C22 | S26 | C28 | 178.7° | 179.9° |
C22 | C25 | C27 | H25 | 180.0° | 179.8° |
C22 | C25 | C27 | C28 | 0.0° | 0.5° |
C22 | C25 | C27 | C29 | 179.3° | 179.8° |
C25 | C22 | S26 | C28 | 0.5° | 0.2° |
S26 | C22 | C25 | C27 | 0.4° | 0.4° |
S26 | C22 | C25 | H25 | 179.6° | 179.8° |
C22 | S26 | C28 | C27 | 0.5° | 0.0° |
C22 | S26 | C28 | C30 | 179.2° | 180.0° |
C25 | C27 | C28 | C29 | 179.4° | 179.7° |
C25 | C27 | C28 | S26 | 0.3° | 0.3° |
C25 | C27 | C28 | C30 | 179.3° | 179.8° |
C25 | C27 | C29 | C31 | 179.2° | 179.7° |
C25 | C27 | C29 | H29 | 0.8° | 0.4° |
H25 | C25 | C27 | C28 | 180.0° | 179.8° |
H25 | C25 | C27 | C29 | 0.7° | 0.1° |
C27 | C28 | S26 | C30 | 179.6° | 180.0° |
C27 | C28 | C30 | C32 | 0.3° | 0.0° |
C27 | C28 | C30 | H30 | 179.7° | 180.0° |
C28 | C27 | C29 | C31 | 0.0° | 0.0° |
C28 | C27 | C29 | H29 | 180.0° | 180.0° |
C29 | C27 | C28 | S26 | 179.7° | 180.0° |
C29 | C27 | C28 | C30 | 0.0° | 0.0° |
C27 | C29 | C31 | C32 | 0.3° | 0.1° |
C27 | C29 | C31 | H29 | 179.9° | 180.0° |
C27 | C29 | C31 | H31 | 179.8° | 180.0° |
S26 | C28 | C30 | C32 | 179.3° | 180.0° |
S26 | C28 | C30 | H30 | 0.7° | 0.0° |
C28 | C30 | C32 | H30 | 180.0° | 180.0° |
C28 | C30 | C32 | CL33 | 179.1° | 179.9° |
C28 | C30 | C32 | C31 | 0.6° | 0.0° |
C30 | C32 | CL33 | C31 | 179.7° | 179.9° |
C30 | C32 | C31 | C29 | 0.6° | 0.1° |
C30 | C32 | C31 | H31 | 179.4° | 180.0° |
H30 | C30 | C32 | CL33 | 0.9° | 0.1° |
H30 | C30 | C32 | C31 | 179.4° | 180.0° |
CL33 | C32 | C31 | C29 | 179.1° | 180.0° |
CL33 | C32 | C31 | H31 | 0.9° | 0.1° |
C32 | C31 | C29 | H31 | 180.0° | 180.0° |
C32 | C31 | C29 | H29 | 179.7° | 179.9° |
H31 | C31 | C29 | H29 | 0.3° | 0.1° |