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SummaryGeometryRelated PDB entries

Q2Q

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAYCAXdoub1.38Å1.38ÅAromatic
CAYCAZsing1.38Å1.39ÅAromatic
CAXCAWsing1.38Å1.39ÅAromatic
CAFCAEdoub1.38Å1.39ÅAromatic
CAFCAAsing1.38Å1.38ÅAromatic
CAZCAUdoub1.40Å1.38ÅAromatic
CAECADsing1.40Å1.39ÅAromatic
CAACABdoub1.38Å1.40ÅAromatic
CAWCAVdoub1.38Å1.40ÅAromatic
CAUCAVsing1.39Å1.39ÅAromatic
CAUCANsing1.48Å1.41Å
CADCAGsing1.47Å1.40Å
CADCACdoub1.40Å1.39ÅAromatic
CABCACsing1.38Å1.38ÅAromatic
NAMCAGdoub1.30Å1.32Å
NAMCALsing1.35Å1.35Å
CAGCAHsing1.51Å1.39Å
FASCAQsing1.40Å1.38Å
CANCALdoub1.40Å1.35ÅAromatic
CANCAOsing1.41Å1.35ÅAromatic
CALNAKsing1.37Å1.39ÅAromatic
CAHCAIsing1.52Å1.37Å
CAOCAQsing1.51Å1.53Å
CAONAPdoub1.30Å1.31ÅAromatic
NAKCAIsing1.35Å1.33Å
NAKNAPsing1.40Å1.41ÅAromatic
CAQFATsing1.40Å1.37Å
CAQFARsing1.40Å1.34Å
CAIOAJdoub1.21Å1.21Å
CAAHAAsing1.08Å1.08Å
CABHABsing1.08Å1.08Å
CACHACsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
CAHHAHsing1.09Å1.10Å
CAHH1sing1.09Å1.10Å
CAVHAVsing1.08Å1.08Å
CAWHAWsing1.08Å1.08Å
CAXHAXsing1.08Å1.08Å
CAYHAYsing1.08Å1.08Å
CAZHAZsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAXCAYCAZ120.5°120.1°
CAYCAXCAW118.8°120.3°
CAYCAXHAX120.6°119.9°
CAXCAYHAY119.8°119.9°
CAYCAZCAU121.5°119.8°
CAZCAYHAY119.8°119.9°
CAYCAZHAZ119.2°120.1°
CAXCAWCAV120.4°120.1°
CAXCAWHAW119.8°120.0°
CAWCAXHAX120.6°119.9°
CAECAFCAA120.4°120.2°
CAFCAECAD120.6°119.8°
CAFCAEHAE119.7°120.1°
CAECAFHAF119.8°119.9°
CAFCAACAB119.3°120.4°
CAFCAAHAA120.3°119.8°
CAACAFHAF119.8°119.9°
CAZCAUCAV117.6°119.8°
CAZCAUCAN118.8°120.1°
CAUCAZHAZ119.2°120.1°
CAECADCAG119.9°120.2°
CAECADCAC118.8°119.6°
CADCAEHAE119.7°120.1°
CAACABCAC119.8°120.2°
CABCAAHAA120.3°119.8°
CAACABHAB120.1°119.9°
CAWCAVCAU121.2°119.8°
CAWCAVHAV119.4°120.1°
CAVCAWHAW119.8°119.9°
CAVCAUCAN123.6°120.1°
CAUCAVHAV119.4°120.1°
CAUCANCAL122.4°126.3°
CAUCANCAO128.9°126.4°
CAGCADCAC121.2°120.2°
CADCAGNAM117.6°120.8°
CADCAGCAH122.3°120.9°
CADCACCAB121.1°119.8°
CADCACHAC119.5°120.1°
CACCABHAB120.1°119.9°
CABCACHAC119.4°120.1°
CAGNAMCAL121.4°123.2°
NAMCAGCAH120.1°118.3°
NAMCALCAN139.2°129.9°
NAMCALNAK118.2°123.6°
CAGCAHCAI119.4°116.3°
CAGCAHHAH106.9°108.2°
CAGCAHH1106.9°108.1°
FASCAQCAO110.3°109.4°
FASCAQFAT111.6°109.5°
FASCAQFAR108.6°109.5°
CALCANCAO108.7°107.3°
CANCALNAK102.6°106.5°
CANCAOCAQ128.1°125.7°
CANCAONAP115.2°108.7°
CALNAKCAI121.6°121.2°
CALNAKNAP113.1°108.3°
CAHCAINAK119.2°117.5°
CAHCAIOAJ121.2°121.2°
CAICAHHAH106.9°108.1°
CAICAHH1106.9°108.1°
CAQCAONAP116.7°125.6°
CAOCAQFAT108.8°109.5°
CAOCAQFAR112.6°109.5°
CAONAPNAK100.4°109.2°
CAINAKNAP125.3°130.5°
NAKCAIOAJ119.5°121.3°
FATCAQFAR105.0°109.5°
HAHCAHH1109.4°107.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAXCAYCAZHAY180.0°179.7°
CAYCAXCAWHAX180.0°180.0°
CAXCAYCAZCAU0.3°0.6°
CAYCAXCAWCAV1.2°0.0°
CAYCAXCAWHAW178.8°180.0°
CAXCAYCAZHAZ179.7°179.9°
CAZCAYCAXCAW0.9°0.3°
CAYCAZCAUHAZ180.0°179.4°
CAYCAZCAUCAV0.0°0.6°
CAYCAZCAUCAN179.7°179.7°
CAZCAYCAXHAX179.1°179.7°
CAXCAWCAVHAW180.0°180.0°
CAXCAWCAVCAU0.9°0.0°
CAXCAWCAVHAV179.1°180.0°
CAWCAXCAYHAY179.1°180.0°
CAECAFCAAHAF180.0°179.5°
CAFCAECADHAE180.0°179.8°
CAECAFCAACAB0.8°0.5°
CAFCAECADCAG178.1°179.8°
CAFCAECADCAC1.6°0.3°
CAECAFCAAHAA179.2°179.7°
CAACAFCAECAD0.6°0.5°
CAFCAACABHAA180.0°179.7°
CAFCAACABCAC1.2°0.3°
CAFCAACABHAB178.8°179.8°
CAACAFCAEHAE179.4°179.7°
CAZCAUCAVCAW0.3°0.3°
CAZCAUCAVCAN179.7°179.7°
CAZCAUCANCAL49.6°65.3°
CAZCAUCANCAO132.3°115.2°
CAZCAUCAVHAV179.7°179.7°
CAUCAZCAYHAY179.6°179.7°
CAECADCAGCAC176.5°179.9°
CAECADCACCAB1.2°0.1°
CAECADCAGNAM20.2°179.7°
CAECADCAGCAH162.8°0.1°
CAECADCACHAC178.8°180.0°
CADCAECAFHAF179.4°180.0°
CAACABCACCAD0.2°0.1°
CAACABCACHAB180.0°179.9°
CAACABCACHAC179.8°180.0°
CABCAACAFHAF179.2°179.9°
CAWCAVCAUHAV180.0°179.9°
CAWCAVCAUCAN179.9°180.0°
CAVCAWCAXHAX178.9°180.0°
CAVCAUCANCAL130.0°115.0°
CAVCAUCANCAO48.0°64.4°
CAUCAVCAWHAW179.1°180.0°
CAVCAUCAZHAZ180.0°179.9°
CAUCANCALNAM0.5°0.3°
CAUCANCALCAO178.4°179.5°
CAUCANCALNAK178.7°180.0°
CAUCANCAOCAQ1.6°0.4°
CAUCANCAONAP179.6°180.0°
CANCAUCAVHAV0.0°0.1°
CANCAUCAZHAZ0.3°0.3°
CAGCADCACCAB177.7°180.0°
CADCAGNAMCAH177.0°179.8°
CADCAGNAMCAL178.4°179.8°
CADCAGCAHCAI178.9°180.0°
CAGCADCACHAC2.3°0.1°
CAGCADCAEHAE1.9°0.0°
CADCAGCAHHAH57.5°58.2°
CADCAGCAHH159.6°58.3°
CADCACCABHAC180.0°179.9°
CACCADCAGNAM156.2°0.2°
CACCADCAGCAH20.7°180.0°
CADCACCABHAB179.8°180.0°
CACCADCAEHAE178.4°179.9°
CACCABCAAHAA178.8°179.9°
CAGNAMCALCAN179.3°179.8°
CAGNAMCALNAK1.6°0.5°
NAMCAGCAHCAI2.1°0.2°
NAMCAGCAHHAH119.3°122.0°
NAMCAGCAHH1123.5°121.5°
CALNAMCAGCAH1.4°0.4°
NAMCALCANNAK179.2°179.7°
NAMCALCANCAO179.0°179.8°
NAMCALNAKCAI2.7°0.3°
NAMCALNAKNAP179.8°179.9°
CAGCAHCAIHAH121.4°121.8°
CAGCAHCAIH1121.4°121.7°
CAGCAHCAINAK3.1°0.0°
CAGCAHCAIOAJ179.8°180.0°
CAGCAHHAHH1115.5°116.7°
FASCAQCAOCAN45.4°30.0°
FASCAQCAOFAT122.7°120.0°
FASCAQCAOFAR121.4°120.0°
FASCAQCAONAP133.4°149.5°
FASCAQFATFAR117.4°120.0°
CALCANCAOCAQ179.9°180.0°
CALCANCAONAP1.3°0.5°
CANCALNAKCAI177.9°180.0°
CANCALNAKNAP0.8°0.3°
CAOCANCALNAK0.2°0.5°
CANCAOCAQNAP178.8°179.5°
CANCAONAPNAK1.7°0.3°
CANCAOCAQFAT168.1°90.0°
CANCAOCAQFAR76.0°149.9°
CALNAKCAICAH3.5°0.0°
CALNAKNAPCAO1.5°0.1°
CALNAKCAINAP176.7°179.6°
CALNAKCAIOAJ179.4°180.0°
CAHCAINAKOAJ177.2°180.0°
CAHCAINAKNAP179.8°179.6°
CAICAHHAHH1115.5°116.6°
CAQCAONAPNAK179.4°179.8°
CAOCAQFATFAR120.7°120.1°
CAONAPNAKCAI178.5°179.7°
NAPCAOCAQFAT10.7°90.5°
NAPCAOCAQFAR105.2°29.5°
NAKCAICAHHAH118.3°121.8°
NAKCAICAHH1124.6°121.8°
NAPNAKCAIOAJ2.7°0.4°
OAJCAICAHHAH58.8°58.2°
OAJCAICAHH158.3°58.3°
HAACAACABHAB1.2°0.0°
HAACAACAFHAF0.8°0.2°
HABCABCACHAC0.2°0.1°
HAECAECAFHAF0.6°0.2°
HAVCAVCAWHAW0.9°0.0°
HAWCAWCAXHAX1.2°0.0°
HAXCAXCAYHAY0.9°0.0°
HAYCAYCAZHAZ0.4°0.2°

225399

PDB entries from 2024-09-25

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