Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PB9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C56O54sing1.45Å1.43Å
O54C53sing1.35Å1.34Å
C53O55doub1.21Å1.20Å
C53N41sing1.35Å1.37Å
C42N41sing1.47Å1.47Å
C42C43sing1.53Å1.51Å
N41C40sing1.47Å1.48Å
C43C36sing1.53Å1.53Å
C40C39sing1.53Å1.55Å
C36C35sing1.53Å1.51Å
C36C39sing1.53Å1.55Å
C35N20sing1.47Å1.46Å
O24S22doub1.42Å1.43Å
N20S22sing1.66Å1.82Å
N20C12sing1.46Å1.52Å
C30C29doub1.39Å1.41ÅAromatic
C30C23sing1.38Å1.41ÅAromatic
S22C23sing1.76Å1.77Å
S22O25doub1.42Å1.43Å
C29C28sing1.39Å1.42ÅAromatic
C12C11sing1.53Å1.52Å
C12C13sing1.53Å1.55Å
C23N26doub1.32Å1.36ÅAromatic
C11N10sing1.46Å1.48Å
C13C4sing1.51Å1.52Å
C28C27doub1.38Å1.42ÅAromatic
N26C27sing1.32Å1.36ÅAromatic
N10C60sing1.47Å1.48Å
N10C3sing1.39Å1.41Å
C4C3doub1.39Å1.42ÅAromatic
C4C5sing1.38Å1.43ÅAromatic
C60C61sing1.51Å1.55Å
C3C2sing1.40Å1.44ÅAromatic
C5C6doub1.40Å1.42ÅAromatic
C68N67sing1.47Å1.48Å
C61N67sing1.37Å1.48ÅAromatic
C61C64doub1.35Å1.36ÅAromatic
C2C1doub1.37Å1.42ÅAromatic
C6C1sing1.40Å1.40ÅAromatic
C6C18sing1.43Å1.44Å
N67C66sing1.35Å1.36ÅAromatic
C64N65sing1.34Å1.47ÅAromatic
C18N19trip1.14Å1.16Å
C66N65doub1.31Å1.35ÅAromatic
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C27H27sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
C29H29sing1.08Å1.08Å
C30H30sing1.08Å1.08Å
C35H351sing1.09Å1.10Å
C35H352sing1.09Å1.10Å
C36H36sing1.09Å1.10Å
C39H391sing1.09Å1.10Å
C39H392sing1.09Å1.10Å
C40H401sing1.09Å1.10Å
C40H402sing1.09Å1.10Å
C42H421sing1.09Å1.10Å
C42H422sing1.09Å1.10Å
C43H431sing1.09Å1.10Å
C43H432sing1.09Å1.10Å
C56H561sing1.09Å1.10Å
C56H562sing1.09Å1.10Å
C56H563sing1.09Å1.10Å
C60H601sing1.09Å1.10Å
C60H602sing1.09Å1.10Å
C64H64sing1.08Å1.08Å
C66H66sing1.08Å1.08Å
C68H681sing1.09Å1.10Å
C68H682sing1.09Å1.10Å
C68H683sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C56O54C53118.4°116.9°
O54C56H561109.5°109.5°
O54C56H562109.4°109.4°
O54C56H563109.4°109.5°
O54C53O55122.2°120.0°
O54C53N41116.2°120.0°
O55C53N41121.6°120.0°
C53N41C42120.3°120.6°
C53N41C40122.9°120.6°
N41C42C43109.9°108.8°
C42N41C40116.7°118.8°
N41C42H421109.3°109.6°
N41C42H422109.2°109.6°
C42C43C36110.1°109.3°
C43C42H421109.3°109.6°
C43C42H422109.2°109.6°
C42C43H431109.3°109.5°
C42C43H432109.1°109.5°
N41C40C39111.6°108.8°
N41C40H401108.7°109.6°
N41C40H402108.3°109.7°
C43C36C35105.1°109.5°
C43C36C39111.4°109.5°
C43C36H36113.2°109.5°
C36C43H431109.3°109.5°
C36C43H432109.2°109.5°
C40C39C36111.9°109.3°
C40C39H391108.7°109.5°
C40C39H392108.1°109.5°
C39C40H401108.8°109.6°
C39C40H402108.3°109.6°
C35C36C39115.1°109.4°
C36C35N20118.3°109.4°
C36C35H351106.6°109.5°
C36C35H352104.6°109.5°
C35C36H36109.4°109.5°
C39C36H36102.8°109.5°
C36C39H391108.6°109.5°
C36C39H392108.1°109.5°
C35N20S22119.3°120.1°
C35N20C12114.1°120.0°
N20C35H351106.6°109.4°
N20C35H352104.6°109.5°
O24S22N20106.9°106.4°
O24S22C23107.0°106.4°
O24S22O25119.7°123.2°
S22N20C12126.5°120.0°
N20S22C23107.2°107.2°
N20S22O25105.4°106.4°
N20C12C11112.9°109.8°
N20C12C13114.8°109.8°
N20C12H12104.1°109.8°
C29C30C23118.4°119.1°
C30C29C28119.8°118.4°
C30C29H29120.1°120.8°
C29C30H30120.8°120.4°
C30C23S22118.0°119.6°
C30C23N26122.5°120.8°
C23C30H30120.8°120.4°
C23S22O25110.0°106.4°
S22C23N26119.4°119.6°
C29C28C27117.6°119.2°
C29C28H28121.2°120.4°
C28C29H29120.1°120.8°
C11C12C13112.6°107.9°
C12C11N10115.5°108.7°
C12C11H111107.5°109.6°
C12C11H112106.1°109.8°
C11C12H12106.8°109.8°
C12C13C4112.9°109.6°
C13C12H12104.5°109.8°
C12C13H131108.4°109.4°
C12C13H132107.6°109.4°
C23N26C27119.0°121.7°
C11N10C60115.0°111.0°
C11N10C3122.1°113.2°
N10C11H111107.5°109.6°
N10C11H112106.1°109.6°
C13C4C3120.9°122.0°
C13C4C5119.5°118.0°
C4C13H131108.3°109.5°
C4C13H132107.6°109.5°
C28C27N26122.3°120.8°
C28C27H27118.8°119.6°
C27C28H28121.2°120.4°
N26C27H27118.8°119.6°
C60N10C3122.9°111.0°
N10C60C61112.0°109.5°
N10C60H601108.6°109.5°
N10C60H602108.0°109.5°
N10C3C4120.5°122.9°
N10C3C2121.8°117.4°
C3C4C5119.6°120.0°
C4C3C2117.6°119.6°
C4C5C6121.2°120.4°
C4C5H5119.4°119.8°
C60C61N67126.1°126.6°
C60C61C64128.6°126.5°
C61C60H601108.6°109.4°
C61C60H602108.0°109.4°
C3C2C1122.2°120.6°
C3C2H2118.9°119.7°
C5C6C1119.6°119.5°
C5C6C18120.5°120.2°
C6C5H5119.4°119.8°
C68N67C61124.7°126.4°
C68N67C66128.3°126.4°
N67C68H681109.5°109.5°
N67C68H682109.5°109.5°
N67C68H683109.5°109.4°
N67C61C64105.2°106.8°
C61N67C66107.0°107.2°
C61C64N65110.0°108.0°
C61C64H64125.0°126.0°
C2C1C6119.5°119.8°
C2C1H1120.3°120.1°
C1C2H2118.9°119.7°
C1C6C18119.8°120.2°
C6C1H1120.3°120.1°
C6C18N19177.6°180.0°
N67C66N65112.6°108.7°
N67C66H66123.7°125.7°
C64N65C66105.1°109.3°
N65C64H64125.0°126.0°
N65C66H66123.7°125.6°
H111C11H112114.3°109.6°
H131C13H132112.2°109.4°
H351C35H352116.7°109.5°
H391C39H392111.4°109.5°
H401C40H402111.2°109.6°
H421C42H422109.8°109.7°
H431C43H432109.9°109.5°
H561C56H562109.5°109.5°
H561C56H563109.5°109.5°
H562C56H563109.5°109.5°
H601C60H602111.5°109.5°
H681C68H682109.5°109.5°
H681C68H683109.5°109.4°
H682C68H683109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C56O54C53O5523.2°0.0°
C56O54C53N41157.6°180.0°
O54C56H561H562120.0°120.0°
O54C56H561H563120.0°120.0°
O54C56H562H563120.0°120.0°
O54C53O55N41179.2°180.0°
O54C53N41C420.8°0.0°
O54C53N41C40178.1°180.0°
C53O54C56H5612.7°60.0°
C53O54C56H562117.3°180.0°
C53O54C56H563122.7°60.0°
O55C53N41C42180.0°180.0°
O55C53N41C401.2°0.0°
C53N41C42C40178.9°180.0°
C53N41C42C43122.6°126.4°
C53N41C40C39129.2°126.4°
C53N41C40H4019.2°113.8°
C53N41C40H402111.7°6.6°
C53N41C42H421117.4°113.8°
C53N41C42H4222.8°6.6°
N41C42C43H421120.0°119.8°
N41C42C43H422119.8°119.9°
N41C42C43C3658.4°54.6°
C42N41C40C3949.7°53.6°
C42N41C40H401169.7°66.2°
C42N41C40H40269.4°173.4°
N41C42H421H422119.8°120.4°
N41C42C43H431178.4°65.3°
N41C42C43H43261.4°174.6°
C43C42N41C4056.3°53.6°
C42C43C36H431120.0°119.9°
C42C43C36H432119.8°120.0°
C42C43C36C35177.3°178.7°
C42C43C36C3957.4°61.4°
C42C43C36H3658.0°58.7°
C43C42H421H422119.8°120.3°
C42C43H431H432119.7°120.1°
N41C40C39H401120.0°119.8°
N41C40C39H402119.1°119.9°
N41C40C39C3645.4°54.6°
N41C40C39H39174.6°174.6°
N41C40C39H392164.4°65.3°
N41C40H401H402119.1°120.4°
C40N41C42H42163.7°66.2°
C40N41C42H422176.1°173.4°
C43C36C39C4050.8°61.4°
C43C36C35C39123.0°120.0°
C43C36C35H36121.9°120.0°
C43C36C39H36121.6°120.0°
C43C36C35N20172.0°61.1°
C43C36C35H35152.0°179.0°
C43C36C35H35272.2°58.9°
C43C36C39H39169.1°178.7°
C43C36C39H392169.8°58.6°
C36C43C42H42161.6°65.2°
C36C43C42H422178.2°174.5°
C36C43H431H432119.8°120.1°
C40C39C36C35170.4°178.6°
C40C39C36H391120.0°119.9°
C40C39C36H392118.9°120.0°
C40C39C36H3670.7°58.7°
C40C39H391H392119.0°120.1°
C39C40H401H402119.1°120.3°
C35C36C39H36118.8°120.0°
C36C35N20H351120.0°119.9°
C36C35N20H352115.8°120.0°
C36C35N20S2263.8°67.6°
C36C35N20C12119.9°112.4°
C36C35H351H352116.4°120.1°
C35C36C39H39150.5°58.7°
C35C36C39H39270.6°61.4°
C35C36C43H43157.3°61.4°
C35C36C43H43262.9°58.7°
C39C36C35N2065.0°178.8°
C39C36C35H351175.0°58.9°
C39C36C35H35250.8°61.2°
C36C39H391H392119.0°120.1°
C36C39C40H401165.4°65.2°
C36C39C40H40273.7°174.5°
C39C36C43H431177.4°58.6°
C39C36C43H43262.4°178.7°
C35N20S22O241.1°28.4°
C35N20S22C12175.8°180.0°
C35N20S22C23115.6°85.1°
C35N20S22O25127.3°161.4°
C35N20C12C11122.5°60.0°
C35N20C12C13106.5°58.5°
C35N20C12H127.0°179.2°
N20C35H351H352116.4°120.0°
N20C35C36H3650.1°58.9°
O24S22N20C23114.5°113.5°
O24S22N20O25128.4°132.9°
O24S22N20C12174.7°151.6°
O24S22C23C3057.4°151.4°
O24S22C23O25131.5°133.0°
O24S22C23N26125.3°28.3°
N20S22C23C3057.0°95.1°
N20S22C23O25114.1°113.6°
S22N20C12C1153.5°120.0°
S22N20C12C1377.5°121.6°
N20S22C23N26120.2°85.1°
S22N20C12H12168.9°0.8°
S22N20C35H35156.2°52.3°
S22N20C35H352179.6°172.3°
C12N20S22C2360.1°94.9°
C12N20S22O2557.0°18.7°
N20C12C11C13132.1°119.6°
N20C12C11H12113.8°120.8°
N20C12C13H12113.4°120.8°
N20C12C11N10173.2°172.2°
N20C12C13C4174.7°166.9°
N20C12C11H11153.2°52.5°
N20C12C11H11269.5°67.9°
N20C12C13H13165.3°46.7°
N20C12C13H13256.2°73.1°
C12N20C35H351120.1°127.7°
C12N20C35H3524.1°7.7°
C29C30C23H30180.0°179.5°
C29C30C23S22171.2°179.7°
C30C29C28H29180.0°179.8°
C29C30C23N265.9°0.5°
C30C29C28C273.8°0.2°
C30C29C28H28176.2°179.7°
C30C23S22N26177.2°179.8°
C30C23S22O25171.1°18.5°
C23C30C29C281.5°0.5°
C30C23N26C274.5°0.2°
C23C30C29H29178.5°179.7°
S22C23N26C27172.6°180.0°
S22C23C30H308.8°0.2°
O25S22C23N266.2°161.3°
C29C28C27H28180.0°179.9°
C29C28C27N265.4°0.1°
C29C28C27H27174.6°180.0°
C28C29C30H30178.5°180.0°
C11C12C13H12115.5°119.6°
C12C11N10H111120.0°119.7°
C12C11N10H112117.3°120.0°
C11C12C13C443.5°47.3°
C12C11N10C60160.2°179.2°
C12C11N10C321.4°53.6°
C12C11H111H112117.5°120.5°
C11C12C13H131163.5°72.9°
C11C12C13H13275.0°167.3°
C13C12C11N1041.1°68.2°
C12C13C4H131120.0°120.0°
C12C13C4H132118.5°120.0°
C12C13C4C327.5°16.0°
C12C13C4C5153.9°164.4°
C13C12C11H11178.9°172.1°
C13C12C11H112158.4°51.7°
C12C13H131H132118.6°119.8°
C23N26C27C281.3°0.1°
C23N26C27H27178.7°180.0°
N26C23C30H30174.1°179.9°
C11N10C60C3178.4°126.8°
C11N10C3C43.4°20.7°
C11N10C60C6181.7°41.2°
C11N10C3C2176.3°159.7°
N10C11H111H112117.6°120.3°
N10C11C12H1273.0°51.4°
C11N10C60H60138.2°161.2°
C11N10C60H602159.4°78.8°
C13C4C3N107.0°1.4°
C13C4C3C5178.6°179.6°
C13C4C3C2172.7°179.1°
C13C4C5C6173.1°179.0°
C13C4C5H56.9°0.7°
C4C13C12H1272.0°72.3°
C4C13H131H132118.6°120.0°
C28C27N26H27180.0°180.0°
C27C28C29H29176.2°180.0°
N26C27C28H28174.6°180.0°
C60N10C3C4178.3°146.3°
N10C60C61H601120.0°120.0°
N10C60C61H602118.9°120.0°
C60N10C3C22.0°34.1°
N10C60C61N67171.0°82.2°
N10C60C61C649.9°97.4°
C60N10C11H11179.8°61.0°
C60N10C11H11242.9°59.3°
N10C60H601H602119.0°120.0°
N10C3C4C2179.7°179.5°
N10C3C4C5174.5°179.0°
C3N10C60C6196.7°168.0°
N10C3C2C1177.4°179.2°
N10C3C2H22.6°0.8°
C3N10C11H11198.6°173.4°
C3N10C11H112138.7°66.3°
C3N10C60H601143.3°72.0°
C3N10C60H60222.2°48.0°
C3C4C5C65.5°0.5°
C4C3C2C12.9°0.4°
C4C3C2H2177.1°179.7°
C3C4C5H5174.6°179.8°
C3C4C13H131147.6°104.0°
C3C4C13H13291.0°136.0°
C5C4C3C25.9°0.5°
C4C5C6H5180.0°179.7°
C4C5C6C11.8°0.5°
C4C5C6C18175.8°180.0°
C5C4C13H13133.9°75.5°
C5C4C13H13287.6°44.4°
C60C61N67C680.7°0.0°
C60C61N67C64179.3°179.7°
C60C61N67C66179.2°179.9°
C60C61C64N65179.1°180.0°
C61C60H601H602118.9°120.0°
C60C61C64H640.9°0.1°
C3C2C1H2180.0°179.9°
C3C2C1C60.7°0.3°
C3C2C1H1179.3°180.0°
C5C6C1C21.3°0.4°
C5C6C1C18177.6°179.5°
C5C6C18N19117.6°168.9°
C5C6C1H1178.7°179.9°
C68N67C61C66178.6°179.9°
C68N67C61C64178.6°179.7°
C68N67C66N65178.4°179.7°
C68N67C66H661.6°0.0°
N67C68H681H682120.0°120.0°
N67C68H681H683120.0°119.9°
N67C68H682H683120.0°120.0°
N67C61C64N650.2°0.3°
C61N67C66N650.1°0.4°
N67C61C60H60151.0°37.7°
N67C61C60H60270.1°157.7°
N67C61C64H64179.8°179.8°
C61N67C66H66179.9°179.8°
C61N67C68H68131.8°94.9°
C61N67C68H68288.2°145.0°
C61N67C68H683151.8°25.0°
C64C61N67C660.1°0.5°
C61C64N65H64180.0°179.9°
C61C64N65C660.2°0.0°
C64C61C60H601129.9°142.6°
C64C61C60H602109.0°22.6°
C2C1C6H1180.0°179.6°
C2C1C6C18178.9°179.9°
C1C6C18N1960.0°11.6°
C6C1C2H2179.3°179.7°
C1C6C5H5178.2°179.8°
C18C6C1H11.1°0.5°
C18C6C5H54.1°0.3°
N67C66N65C640.2°0.3°
N67C66N65H66180.0°179.7°
C66N67C68H681150.0°85.0°
C66N67C68H68290.0°35.1°
C66N67C68H68330.0°155.1°
C64N65C66H66179.8°180.0°
C66N65C64H64179.8°180.0°
H1C1C2H20.7°0.1°
H111C11C12H12167.0°68.3°
H112C11C12H1244.3°171.3°
H12C12C13H13148.0°167.6°
H12C12C13H132169.5°47.8°
H27C27C28H285.4°0.0°
H28C28C29H293.8°0.1°
H29C29C30H301.5°0.2°
H351C35C36H3669.9°61.0°
H352C35C36H36165.9°178.9°
H36C36C39H391169.3°61.3°
H36C36C39H39248.2°178.6°
H36C36C43H43162.0°178.6°
H36C36C43H432177.7°61.3°
H391C39C40H40145.4°54.8°
H391C39C40H402166.3°65.5°
H392C39C40H40175.6°174.9°
H392C39C40H40245.3°54.6°
H421C42C43H43158.4°174.9°
H421C42C43H432178.6°54.8°
H422C42C43H43161.8°54.6°
H422C42C43H43258.4°65.6°
H561C56H562H563120.0°120.0°
H681C68H682H683120.0°120.0°

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon