Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

OY7

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3C5doub1.21Å1.23Å
C6C5sing1.51Å1.49Å
C5C4sing1.48Å1.49Å
C4C3doub1.40Å1.39ÅAromatic
C4C7sing1.40Å1.39ÅAromatic
C3C2sing1.38Å1.38ÅAromatic
C7C8doub1.38Å1.39ÅAromatic
C2C1doub1.39Å1.41ÅAromatic
C8C1sing1.39Å1.40ÅAromatic
C1B1sing1.57Å1.58Å
O1B1sing1.42Å1.36Å
B1O2sing1.42Å1.37Å
C6H1sing1.09Å1.10Å
C6H2sing1.09Å1.10Å
C6H3sing1.09Å1.10Å
C7H4sing1.08Å1.08Å
C8H5sing1.08Å1.08Å
O1H6sing0.97Å0.95Å
O2H7sing0.97Å0.95Å
C2H8sing1.08Å1.08Å
C3H9sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3C5C6118.9°120.0°
O3C5C4120.3°120.0°
C6C5C4120.5°120.0°
C5C6H1109.5°109.5°
C5C6H2109.5°109.5°
C5C6H3109.5°109.5°
C5C4C3120.6°120.0°
C5C4C7121.4°120.1°
C3C4C7117.9°119.9°
C4C3C2121.0°119.9°
C4C3H9119.5°120.1°
C4C7C8121.0°119.9°
C4C7H4119.5°120.0°
C3C2C1122.0°120.1°
C3C2H8119.0°120.0°
C2C3H9119.5°120.0°
C7C8C1122.1°120.1°
C8C7H4119.5°120.1°
C7C8H5118.9°120.0°
C2C1C8115.8°120.1°
C2C1B1122.5°120.0°
C1C2H8119.0°119.9°
C8C1B1121.5°119.9°
C1C8H5118.9°120.0°
C1B1O1123.9°120.0°
C1B1O2118.5°120.0°
O1B1O2117.2°120.0°
B1O1H6109.5°114.0°
B1O2H7109.5°114.0°
H1C6H2109.5°109.4°
H1C6H3109.5°109.5°
H2C6H3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3C5C6C4173.3°180.0°
O3C5C4C33.6°0.0°
O3C5C4C7179.8°179.7°
O3C5C6H10.0°120.0°
O3C5C6H2120.0°0.1°
O3C5C6H3120.0°120.0°
C6C5C4C3169.6°180.0°
C6C5C4C77.0°0.3°
C5C6H1H2120.0°120.0°
C5C6H1H3120.0°120.0°
C5C6H2H3120.0°120.0°
C5C4C3C7176.7°179.7°
C5C4C3C2177.0°179.7°
C5C4C7C8177.5°179.7°
C4C5C6H1173.3°60.0°
C4C5C6H253.3°179.9°
C4C5C6H366.7°60.0°
C5C4C7H42.5°0.4°
C5C4C3H93.0°0.2°
C4C3C2H9180.0°179.9°
C3C4C7C80.8°0.0°
C4C3C2C10.6°0.0°
C3C4C7H4179.2°179.9°
C4C3C2H8179.4°179.9°
C7C4C3C20.3°0.0°
C4C7C8H4180.0°179.9°
C4C7C8C10.4°0.0°
C4C7C8H5179.6°180.0°
C7C4C3H9179.7°179.9°
C3C2C1H8180.0°180.0°
C3C2C1C81.0°0.0°
C3C2C1B1175.5°180.0°
C7C8C1C20.5°0.0°
C7C8C1H5180.0°180.0°
C7C8C1B1175.0°180.0°
C2C1C8B1174.6°180.0°
C2C1B1O134.1°180.0°
C2C1B1O2138.5°0.0°
C2C1C8H5179.5°180.0°
C1C2C3H9179.4°180.0°
C8C1B1O1151.7°0.0°
C8C1B1O235.7°180.0°
C1C8C7H4179.6°179.9°
C8C1C2H8179.0°179.9°
C1B1O1O2172.7°180.0°
B1C1C8H55.0°0.0°
C1B1O1H6180.0°180.0°
C1B1O2H7180.0°0.0°
B1C1C2H84.5°0.0°
O1B1O2H76.9°180.0°
O2B1O1H67.3°0.0°
H1C6H2H3120.0°120.0°
H4C7C8H50.4°0.1°
H8C2C3H90.6°0.0°

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon