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SummaryGeometryRelated PDB entries

O6O

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C05C04doub1.38Å1.39ÅAromatic
C05C06sing1.38Å1.39ÅAromatic
C04C03sing1.39Å1.40ÅAromatic
O01C02doub1.22Å1.21Å
C06C07doub1.39Å1.40ÅAromatic
C03C02sing1.48Å1.46Å
C03C18doub1.40Å1.39ÅAromatic
C02C27sing1.41Å1.44Å
C07C18sing1.40Å1.39ÅAromatic
C07C08sing1.48Å1.48Å
C18O19sing1.35Å1.37Å
C17C08doub1.39Å1.41ÅAromatic
C17C16sing1.38Å1.40ÅAromatic
C27C20doub1.36Å1.34Å
C08C09sing1.39Å1.41ÅAromatic
O19C20sing1.34Å1.34Å
C16C11doub1.39Å1.40ÅAromatic
C20N21sing1.37Å1.41Å
N21C22sing1.47Å1.45Å
N21C26sing1.47Å1.49Å
C09C10doub1.38Å1.40ÅAromatic
C11C10sing1.39Å1.40ÅAromatic
C11O12sing1.36Å1.36Å
C22C23sing1.53Å1.54Å
C26C25sing1.53Å1.55Å
C10O15sing1.36Å1.40Å
O12C13sing1.43Å1.41Å
C23O24sing1.43Å1.41Å
C13C14sing1.54Å1.54Å
C25O24sing1.43Å1.42Å
O15C14sing1.43Å1.43Å
C13H1sing1.09Å1.10Å
C13H2sing1.09Å1.10Å
C17H3sing1.08Å1.08Å
C22H4sing1.09Å1.10Å
C22H5sing1.09Å1.10Å
C26H6sing1.09Å1.10Å
C26H7sing1.09Å1.10Å
C04H8sing1.08Å1.08Å
C05H9sing1.08Å1.08Å
C06H10sing1.08Å1.08Å
C09H11sing1.08Å1.08Å
C14H12sing1.09Å1.10Å
C14H13sing1.09Å1.10Å
C16H14sing1.08Å1.08Å
C23H15sing1.09Å1.10Å
C23H16sing1.09Å1.10Å
C25H17sing1.09Å1.10Å
C25H18sing1.09Å1.10Å
C27H19sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C04C05C06119.9°120.4°
C05C04C03118.4°119.9°
C05C04H8120.8°120.1°
C04C05H9120.1°119.8°
C05C06C07122.3°120.6°
C06C05H9120.0°119.8°
C05C06H10118.8°119.7°
C04C03C02119.6°121.3°
C04C03C18121.0°120.3°
C03C04H8120.8°120.1°
O01C02C03123.9°121.3°
O01C02C27121.5°121.3°
C06C07C18117.0°119.7°
C06C07C08117.6°120.2°
C07C06H10118.9°119.7°
C02C03C18119.5°118.4°
C03C02C27114.6°117.4°
C03C18C07121.5°119.3°
C03C18O19121.7°119.8°
C02C27C20121.9°119.5°
C02C27H19119.0°120.2°
C18C07C08125.4°120.1°
C07C18O19116.8°120.9°
C07C08C17122.5°120.1°
C07C08C09119.4°120.1°
C18O19C20119.5°122.3°
C08C17C16120.9°120.0°
C17C08C09118.0°119.8°
C08C17H3119.5°120.0°
C17C16C11120.4°120.2°
C16C17H3119.5°120.0°
C17C16H14119.8°119.9°
C27C20O19122.7°122.5°
C27C20N21126.1°118.7°
C20C27H19119.0°120.2°
C08C09C10121.0°120.0°
C08C09H11119.5°120.0°
O19C20N21110.5°118.8°
C16C11C10119.3°120.1°
C16C11O12118.4°119.2°
C11C16H14119.8°119.9°
C20N21C22125.6°120.9°
C20N21C26120.8°121.0°
C22N21C26113.1°118.1°
N21C22C23105.8°108.4°
N21C22H4110.4°109.7°
N21C22H5110.4°109.7°
N21C26C25108.1°108.4°
N21C26H6109.9°109.7°
N21C26H7109.8°109.7°
C09C10C11120.4°119.9°
C09C10O15117.9°119.3°
C10C09H11119.5°120.0°
C10C11O12122.3°120.7°
C11C10O15121.7°120.8°
C11O12C13113.9°116.7°
C22C23O24110.8°109.2°
C23C22H4110.4°109.6°
C23C22H5110.4°109.6°
C22C23H15109.2°109.5°
C22C23H16109.2°109.5°
C26C25O24111.7°109.2°
C25C26H6109.8°109.7°
C25C26H7109.8°109.7°
C26C25H17108.9°109.6°
C26C25H18108.9°109.6°
C10O15C14115.3°116.7°
O12C13C14111.0°108.2°
O12C13H1109.1°110.0°
O12C13H2109.1°109.6°
C23O24C25115.4°114.1°
O24C23H15109.1°109.5°
O24C23H16109.1°109.5°
C13C14O15112.2°108.0°
C14C13H1109.1°109.7°
C14C13H2109.1°109.7°
C13C14H12108.8°109.7°
C13C14H13108.8°109.7°
O24C25H17108.9°109.5°
O24C25H18108.9°109.5°
O15C14H12108.8°109.8°
O15C14H13108.8°109.8°
H1C13H2109.4°109.7°
H4C22H5109.5°109.7°
H6C26H7109.5°109.7°
H12C14H13109.4°109.7°
H15C23H16109.4°109.5°
H17C25H18109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C04C05C06H9180.0°179.9°
C05C04C03H8180.0°179.9°
C04C05C06C070.0°0.0°
C05C04C03C02179.7°180.0°
C05C04C03C180.3°0.2°
C04C05C06H10180.0°180.0°
C06C05C04C030.0°0.0°
C05C06C07H10180.0°180.0°
C05C06C07C180.4°0.3°
C05C06C07C08179.8°180.0°
C06C05C04H8180.0°180.0°
C04C03C02O010.2°0.1°
C04C03C02C18179.5°179.8°
C04C03C02C27179.7°180.0°
C04C03C18C070.7°0.5°
C04C03C18O19180.0°179.9°
C03C04C05H9179.9°180.0°
O01C02C03C27179.5°179.9°
O01C02C03C18179.2°179.7°
O01C02C27C20178.8°180.0°
O01C02C27H191.1°0.1°
C06C07C18C030.7°0.6°
C06C07C18C08179.8°179.7°
C06C07C18O19179.9°179.9°
C06C07C08C1747.0°130.0°
C06C07C08C09136.2°49.6°
C07C06C05H9180.0°179.9°
C02C03C18C07179.9°179.7°
C02C03C18O190.6°0.3°
C03C02C27C200.6°0.1°
C02C03C04H80.3°0.1°
C03C02C27H19179.4°180.0°
C18C03C02C270.3°0.2°
C03C18C07O19179.4°179.4°
C03C18C07C08179.5°179.8°
C03C18O19C201.2°0.1°
C18C03C04H8179.7°179.7°
C02C27C20H19180.0°179.9°
C02C27C20O191.4°0.4°
C02C27C20N21170.7°180.0°
C18C07C08C17132.8°50.3°
C18C07C08C0944.0°130.0°
C07C18O19C20179.5°179.4°
C18C07C06H10179.6°179.7°
C08C07C18O190.1°0.4°
C07C08C17C09176.8°179.7°
C07C08C17C16178.5°179.9°
C07C08C09C10177.9°179.7°
C07C08C17H31.4°0.4°
C08C07C06H100.2°0.0°
C07C08C09H112.1°0.4°
C18O19C20C271.6°0.3°
C18O19C20N21172.4°179.9°
C08C17C16H3180.0°179.8°
C08C17C16C111.5°0.2°
C17C08C09C100.9°0.1°
C17C08C09H11179.0°180.0°
C08C17C16H14178.5°180.0°
C16C17C08C091.7°0.2°
C17C16C11H14180.0°179.8°
C17C16C11C100.5°0.1°
C17C16C11O12179.3°179.8°
C27C20O19N21170.8°179.6°
C27C20N21C221.1°148.1°
C27C20N21C26173.1°31.9°
C08C09C10H11180.0°179.9°
C08C09C10C110.0°0.1°
C08C09C10O15179.9°179.9°
C09C08C17H3178.3°180.0°
O19C20N21C22169.4°32.3°
O19C20N21C262.6°147.8°
O19C20C27H19178.7°179.8°
C16C11C10C090.2°0.1°
C16C11C10O12179.8°179.9°
C16C11C10O15179.9°179.9°
C16C11O12C13157.3°163.0°
C11C16C17H3178.5°180.0°
C20N21C22C26172.6°179.9°
C20N21C22C23110.5°129.5°
C20N21C26C25114.9°129.5°
C20N21C22H48.9°110.8°
C20N21C22H5130.1°9.8°
C20N21C26H6125.3°9.8°
C20N21C26H74.9°110.8°
N21C20C27H199.3°0.1°
N21C22C23H4119.4°119.7°
N21C22C23H5119.4°119.8°
C22N21C26C2558.1°50.6°
N21C22C23O2459.1°52.3°
N21C22H4H5121.7°120.7°
C22N21C26H661.7°170.2°
C22N21C26H7177.9°69.1°
N21C22C23H1561.1°67.7°
N21C22C23H16179.3°172.2°
C26N21C22C2362.0°50.6°
N21C26C25H6119.8°119.7°
N21C26C25H7119.8°119.8°
N21C26C25O2449.6°52.3°
C26N21C22H4178.6°69.1°
C26N21C22H557.4°170.2°
N21C26H6H7120.7°120.6°
N21C26C25H17170.0°172.2°
N21C26C25H1870.7°67.6°
C09C10C11O15179.8°179.8°
C09C10C11O12180.0°180.0°
C09C10O15C14172.9°162.7°
C10C11O12C1322.5°17.2°
C11C10O15C147.0°17.5°
C11C10C09H11180.0°179.8°
C10C11C16H14179.5°179.9°
O12C11C10O150.1°0.3°
C11O12C13C1448.4°46.4°
C11O12C13H171.9°73.4°
C11O12C13H2168.6°165.9°
O12C11C16H140.7°0.0°
C22C23O24H15120.2°120.0°
C22C23O24H16120.2°119.9°
C22C23O24C2557.1°62.6°
C23C22H4H5121.7°120.5°
C22C23H15H16119.4°120.1°
C26C25O24C2352.2°62.6°
C26C25O24H17120.4°119.9°
C26C25O24H18120.3°120.0°
C25C26H6H7120.6°120.5°
C26C25H17H18119.0°120.2°
C10O15C14C1333.4°46.6°
O15C10C09H110.1°0.0°
C10O15C14H12153.8°73.0°
C10O15C14H1387.0°166.2°
O12C13C14H1120.2°120.0°
O12C13C14H2120.3°119.5°
O12C13C14O1555.3°60.1°
O12C13H1H2119.3°120.6°
O12C13C14H12175.7°59.6°
O12C13C14H1365.2°179.8°
O24C23C22H4178.5°67.4°
O24C23C22H560.4°172.1°
O24C23H15H16119.4°120.1°
C23O24C25H17172.5°177.4°
C23O24C25H1868.2°57.4°
C13C14O15H12120.4°119.6°
C13C14O15H13120.4°119.6°
C14C13H1H2119.3°120.5°
C13C14H12H13118.7°120.6°
O24C25C26H670.2°172.0°
O24C25C26H7169.4°67.4°
C25O24C23H1563.2°57.4°
C25O24C23H16177.3°177.5°
O24C25H17H18118.9°120.0°
O15C14C13H165.0°59.9°
O15C14C13H2175.5°179.6°
O15C14H12H13118.8°120.8°
H1C13C14H1255.5°179.6°
H1C13C14H13174.6°59.8°
H2C13C14H1264.0°59.9°
H2C13C14H1355.1°60.7°
H3C17C16H141.5°0.2°
H4C22C23H1558.3°172.6°
H4C22C23H1661.3°52.5°
H5C22C23H15179.4°52.1°
H5C22C23H1659.8°68.0°
H6C26C25H1750.2°68.1°
H6C26C25H18169.5°52.1°
H7C26C25H1770.2°52.5°
H7C26C25H1849.1°172.6°
H8C04C05H90.1°0.1°
H9C05C06H100.0°0.1°

224931

PDB entries from 2024-09-11

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