O6H
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | CA | sing | 1.51Å | 1.52Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CF2 | CD2 | sing | 1.51Å | 1.50Å | |
CB | CG | sing | 1.51Å | 1.51Å | |
CD2 | CG | doub | 1.38Å | 1.39Å | Aromatic |
CD2 | CE2 | sing | 1.38Å | 1.38Å | Aromatic |
CG | CD1 | sing | 1.38Å | 1.39Å | Aromatic |
CE2 | CZ | doub | 1.38Å | 1.38Å | Aromatic |
CD1 | CF1 | sing | 1.51Å | 1.50Å | |
CD1 | CE1 | doub | 1.38Å | 1.38Å | Aromatic |
CZ | CE1 | sing | 1.38Å | 1.38Å | Aromatic |
CZ | CH | sing | 1.51Å | 1.50Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB1 | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CF1 | HF11 | sing | 1.09Å | 1.10Å | |
CF1 | HF12 | sing | 1.09Å | 1.10Å | |
CF1 | HF13 | sing | 1.09Å | 1.10Å | |
CF2 | HF23 | sing | 1.09Å | 1.10Å | |
CF2 | HF22 | sing | 1.09Å | 1.10Å | |
CF2 | HF21 | sing | 1.09Å | 1.10Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CH | HH2 | sing | 1.09Å | 1.10Å | |
CH | HH3 | sing | 1.09Å | 1.10Å | |
CH | HH1 | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 6.47Å | |
OXT | HXT | sing | 0.97Å | 0.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 112.0° | 109.5° |
N | CA | CB | 111.1° | 109.4° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 108.4° | 109.4° |
O | C | CA | 121.0° | 120.0° |
O | C | OXT | 151.9° | 120.0° |
C | CA | CB | 110.1° | 109.5° |
C | CA | HA | 107.6° | 109.5° |
CA | C | OXT | 47.2° | 120.0° |
CA | CB | CG | 113.7° | 109.5° |
CB | CA | HA | 107.5° | 109.5° |
CA | CB | HB1 | 108.4° | 109.5° |
CA | CB | HB2 | 108.4° | 109.5° |
CF2 | CD2 | CG | 119.5° | 120.0° |
CF2 | CD2 | CE2 | 119.0° | 120.0° |
CD2 | CF2 | HF23 | 109.5° | 109.4° |
CD2 | CF2 | HF22 | 109.5° | 109.4° |
CD2 | CF2 | HF21 | 109.5° | 109.5° |
CB | CG | CD2 | 120.8° | 120.0° |
CB | CG | CD1 | 121.3° | 120.0° |
CG | CB | HB1 | 108.4° | 109.5° |
CG | CB | HB2 | 108.4° | 109.4° |
CG | CD2 | CE2 | 121.5° | 120.0° |
CD2 | CG | CD1 | 117.9° | 120.0° |
CD2 | CE2 | CZ | 119.4° | 120.0° |
CD2 | CE2 | HE2 | 120.3° | 120.0° |
CG | CD1 | CF1 | 119.9° | 120.0° |
CG | CD1 | CE1 | 121.2° | 120.0° |
CE2 | CZ | CE1 | 120.6° | 120.0° |
CE2 | CZ | CH | 119.5° | 120.0° |
CZ | CE2 | HE2 | 120.3° | 120.0° |
CF1 | CD1 | CE1 | 119.0° | 120.0° |
CD1 | CF1 | HF11 | 109.5° | 109.4° |
CD1 | CF1 | HF12 | 109.5° | 109.4° |
CD1 | CF1 | HF13 | 109.5° | 109.5° |
CD1 | CE1 | CZ | 119.4° | 120.0° |
CD1 | CE1 | HE1 | 120.3° | 120.0° |
CE1 | CZ | CH | 119.9° | 120.0° |
CZ | CE1 | HE1 | 120.3° | 120.0° |
CZ | CH | HH2 | 109.5° | 109.5° |
CZ | CH | HH3 | 109.5° | 109.5° |
CZ | CH | HH1 | 109.4° | 109.5° |
H | N | H2 | 109.5° | 111.1° |
HB1 | CB | HB2 | 109.5° | 109.4° |
HF11 | CF1 | HF12 | 109.5° | 109.5° |
HF11 | CF1 | HF13 | 109.5° | 109.5° |
HF12 | CF1 | HF13 | 109.5° | 109.5° |
HF23 | CF2 | HF22 | 109.5° | 109.5° |
HF23 | CF2 | HF21 | 109.5° | 109.5° |
HF22 | CF2 | HF21 | 109.4° | 109.5° |
HH2 | CH | HH3 | 109.5° | 109.4° |
HH2 | CH | HH1 | 109.5° | 109.4° |
HH3 | CH | HH1 | 109.5° | 109.5° |
C | OXT | HXT | 90.0° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | O | 142.0° | 20.0° |
N | CA | C | CB | 124.1° | 120.0° |
N | CA | C | HA | 119.0° | 120.0° |
N | CA | CB | HA | 118.4° | 120.0° |
N | CA | CB | CG | 61.5° | 65.5° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | HB1 | 59.1° | 54.6° |
N | CA | CB | HB2 | 177.8° | 174.6° |
N | CA | C | OXT | 5.8° | 160.0° |
O | C | CA | OXT | 147.8° | 179.9° |
O | C | CA | CB | 93.9° | 99.9° |
O | C | CA | HA | 23.0° | 140.0° |
O | C | OXT | HXT | 90.0° | 0.1° |
C | CA | CB | HA | 117.0° | 120.0° |
C | CA | CB | CG | 173.8° | 174.5° |
C | CA | N | H | 180.0° | 55.1° |
C | CA | N | H2 | 60.0° | 179.2° |
C | CA | CB | HB1 | 65.6° | 65.4° |
C | CA | CB | HB2 | 53.2° | 54.6° |
CA | C | OXT | HXT | 90.0° | 180.0° |
CA | CB | CG | HB1 | 120.6° | 120.1° |
CA | CB | CG | HB2 | 120.6° | 120.0° |
CA | CB | CG | CD2 | 99.1° | 84.4° |
CA | CB | CG | CD1 | 81.0° | 95.8° |
CB | CA | N | H | 56.4° | 64.9° |
CB | CA | N | H2 | 176.4° | 59.2° |
CA | CB | HB1 | HB2 | 118.0° | 120.0° |
CB | CA | C | OXT | 118.3° | 80.0° |
CF2 | CD2 | CG | CB | 0.0° | 0.3° |
CF2 | CD2 | CG | CE2 | 180.0° | 180.0° |
CF2 | CD2 | CG | CD1 | 179.9° | 180.0° |
CF2 | CD2 | CE2 | CZ | 180.0° | 179.4° |
CD2 | CF2 | HF23 | HF22 | 120.0° | 119.9° |
CD2 | CF2 | HF23 | HF21 | 120.0° | 120.0° |
CD2 | CF2 | HF22 | HF21 | 120.0° | 120.0° |
CF2 | CD2 | CE2 | HE2 | 0.1° | 0.1° |
CB | CG | CD2 | CD1 | 179.9° | 179.7° |
CB | CG | CD2 | CE2 | 179.9° | 179.7° |
CB | CG | CD1 | CF1 | 0.0° | 0.0° |
CB | CG | CD1 | CE1 | 179.9° | 180.0° |
CG | CB | CA | HA | 56.9° | 54.5° |
CG | CB | HB1 | HB2 | 118.1° | 119.9° |
CG | CD2 | CE2 | CZ | 0.0° | 0.6° |
CD2 | CG | CD1 | CF1 | 179.9° | 179.7° |
CD2 | CG | CD1 | CE1 | 0.0° | 0.3° |
CD2 | CG | CB | HB1 | 21.6° | 155.5° |
CD2 | CG | CB | HB2 | 140.3° | 35.6° |
CG | CD2 | CF2 | HF23 | 90.0° | 90.0° |
CG | CD2 | CF2 | HF22 | 150.0° | 150.0° |
CG | CD2 | CF2 | HF21 | 30.0° | 30.0° |
CG | CD2 | CE2 | HE2 | 180.0° | 180.0° |
CE2 | CD2 | CG | CD1 | 0.0° | 0.0° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.3° |
CD2 | CE2 | CZ | CE1 | 0.0° | 0.9° |
CD2 | CE2 | CZ | CH | 179.9° | 180.0° |
CE2 | CD2 | CF2 | HF23 | 90.0° | 90.0° |
CE2 | CD2 | CF2 | HF22 | 30.0° | 29.9° |
CE2 | CD2 | CF2 | HF21 | 150.0° | 150.0° |
CG | CD1 | CF1 | CE1 | 179.9° | 180.0° |
CG | CD1 | CE1 | CZ | 0.0° | 0.1° |
CD1 | CG | CB | HB1 | 158.3° | 24.2° |
CD1 | CG | CB | HB2 | 39.6° | 144.2° |
CG | CD1 | CF1 | HF11 | 90.0° | 85.3° |
CG | CD1 | CF1 | HF12 | 149.9° | 154.7° |
CG | CD1 | CF1 | HF13 | 30.0° | 34.7° |
CG | CD1 | CE1 | HE1 | 180.0° | 180.0° |
CE2 | CZ | CE1 | CD1 | 0.0° | 0.6° |
CE2 | CZ | CE1 | CH | 179.9° | 179.1° |
CE2 | CZ | CE1 | HE1 | 180.0° | 179.5° |
CE2 | CZ | CH | HH2 | 90.0° | 90.0° |
CE2 | CZ | CH | HH3 | 150.1° | 150.0° |
CE2 | CZ | CH | HH1 | 30.1° | 29.9° |
CF1 | CD1 | CE1 | CZ | 179.9° | 179.9° |
CD1 | CF1 | HF11 | HF12 | 120.0° | 120.0° |
CD1 | CF1 | HF11 | HF13 | 120.0° | 120.0° |
CD1 | CF1 | HF12 | HF13 | 120.0° | 120.0° |
CF1 | CD1 | CE1 | HE1 | 0.1° | 0.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 179.9° |
CD1 | CE1 | CZ | CH | 179.9° | 179.7° |
CE1 | CD1 | CF1 | HF11 | 90.1° | 94.7° |
CE1 | CD1 | CF1 | HF12 | 30.0° | 25.3° |
CE1 | CD1 | CF1 | HF13 | 150.0° | 145.3° |
CE1 | CZ | CE2 | HE2 | 180.0° | 179.7° |
CE1 | CZ | CH | HH2 | 89.9° | 90.9° |
CE1 | CZ | CH | HH3 | 30.0° | 29.1° |
CE1 | CZ | CH | HH1 | 150.0° | 149.2° |
CH | CZ | CE1 | HE1 | 0.1° | 0.4° |
CH | CZ | CE2 | HE2 | 0.1° | 0.6° |
CZ | CH | HH2 | HH3 | 120.0° | 120.0° |
CZ | CH | HH2 | HH1 | 120.0° | 120.0° |
CZ | CH | HH3 | HH1 | 120.0° | 120.0° |
H | N | CA | HA | 61.5° | 175.1° |
H2 | N | CA | HA | 58.6° | 60.8° |
HA | CA | CB | HB1 | 177.5° | 174.6° |
HA | CA | CB | HB2 | 63.8° | 65.5° |
HA | CA | C | OXT | 124.8° | 40.1° |
HF11 | CF1 | HF12 | HF13 | 120.0° | 120.1° |
HF23 | CF2 | HF22 | HF21 | 120.0° | 120.0° |
HH2 | CH | HH3 | HH1 | 120.0° | 120.0° |