Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

O40

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C1doub1.39Å1.41ÅAromatic
C1C6sing1.37Å1.39ÅAromatic
C1H1sing1.08Å1.08Å
O11C2sing1.36Å1.39Å
C2C3sing1.38Å1.41ÅAromatic
C12C3sing1.51Å1.53Å
C3C4doub1.39Å1.40ÅAromatic
C4C5sing1.41Å1.38ÅAromatic
C4O7sing1.35Å1.40ÅAromatic
C6C5doub1.40Å1.38ÅAromatic
C5C9sing1.46Å1.48ÅAromatic
C6H6sing1.08Å1.08Å
O7N8sing1.41Å1.44ÅAromatic
C9N8doub1.30Å1.29ÅAromatic
C9C14sing1.51Å1.50Å
C13C10doub1.38Å1.40ÅAromatic
C10C42sing1.39Å1.41ÅAromatic
C10H10sing1.08Å1.08Å
C15O11sing1.43Å1.44Å
C17C12sing1.53Å1.56Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C13C16sing1.40Å1.40ÅAromatic
C13H13sing1.08Å1.08Å
F40C14sing1.40Å1.37Å
C14F38sing1.40Å1.38Å
C14F39sing1.40Å1.36Å
C26C15sing1.53Å1.54Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C32C16sing1.47Å1.52Å
C16C18doub1.40Å1.40ÅAromatic
C20C17sing1.53Å1.55Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
C18C19sing1.38Å1.39ÅAromatic
C18H18sing1.08Å1.08Å
C42C19doub1.39Å1.41ÅAromatic
C19H19sing1.08Å1.08Å
C20H20sing1.09Å1.10Å
C20H20Asing1.09Å1.10Å
C20H20Bsing1.09Å1.10Å
C23N21sing1.35Å1.37Å
N21C22sing1.46Å1.46Å
N21C29sing1.47Å1.48Å
C22H22sing1.09Å1.10Å
C22H22Asing1.09Å1.10Å
C22H22Bsing1.09Å1.10Å
N24C23sing1.35Å1.32Å
O33C23doub1.22Å1.21Å
C42N24sing1.39Å1.37Å
N24HN24sing0.97Å1.00Å
C26C29sing1.53Å1.55Å
C26H26sing1.09Å1.10Å
C26H26Asing1.09Å1.10Å
C29H29sing1.09Å1.10Å
C29H29Asing1.09Å1.10Å
O30C32doub1.22Å1.35Å
C32O34sing1.35Å1.23Å
O34HO34sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6120.9°120.4°
C2C1H1119.6°119.8°
C1C2O11120.0°119.8°
C1C2C3121.7°120.5°
C6C1H1119.5°119.7°
C1C6C5116.1°119.9°
C1C6H6121.9°120.1°
O11C2C3118.3°119.7°
C2O11C15121.6°117.0°
C2C3C12122.8°120.1°
C2C3C4116.7°119.8°
C12C3C4120.5°120.1°
C3C12C17111.4°109.5°
C3C12H12108.8°109.5°
C3C12H12A108.8°109.4°
C3C4C5119.7°119.5°
C3C4O7126.6°133.4°
C5C4O7113.7°107.1°
C4C5C6124.9°119.9°
C4C5C999.9°106.4°
C4O7N8105.0°109.3°
C6C5C9135.2°133.7°
C5C6H6122.0°120.0°
C5C9N8114.1°107.5°
C5C9C14119.2°126.3°
O7N8C9107.4°109.7°
N8C9C14126.7°126.3°
C9C14F40114.2°109.5°
C9C14F38107.8°109.5°
C9C14F39104.3°109.4°
C13C10C42120.8°120.1°
C13C10H10119.6°119.9°
C10C13C16120.6°119.9°
C10C13H13119.7°120.0°
C42C10H10119.6°119.9°
C10C42C19117.7°120.1°
C10C42N24121.8°120.0°
O11C15C26105.8°109.5°
O11C15H15110.7°109.5°
O11C15H15A110.7°109.5°
C17C12H12108.9°109.5°
C17C12H12A108.8°109.5°
C12C17C20113.0°109.5°
C12C17H17108.3°109.5°
C12C17H17A108.3°109.4°
H12C12H12A110.1°109.5°
C16C13H13119.7°120.0°
C13C16C32120.3°120.1°
C13C16C18119.0°119.8°
F40C14F38112.6°109.5°
F40C14F39106.3°109.5°
F38C14F39111.5°109.5°
C26C15H15110.7°109.5°
C26C15H15A110.7°109.5°
C15C26C29110.6°109.5°
C15C26H26109.1°109.4°
C15C26H26A109.1°109.5°
H15C15H15A108.2°109.5°
C32C16C18120.7°120.1°
C16C32O30118.2°120.0°
C16C32O34119.6°120.0°
C16C18C19120.2°119.9°
C16C18H18119.9°120.1°
C20C17H17108.3°109.5°
C20C17H17A108.3°109.4°
C17C20H20109.5°109.5°
C17C20H20A109.5°109.4°
C17C20H20B109.5°109.4°
H17C17H17A110.6°109.5°
C19C18H18119.9°120.0°
C18C19C42121.6°120.0°
C18C19H19119.2°120.0°
C42C19H19119.2°120.0°
C19C42N24120.5°119.9°
H20C20H20A109.4°109.5°
H20C20H20B109.4°109.5°
H20AC20H20B109.5°109.5°
C23N21C22120.0°120.0°
C23N21C29120.8°120.0°
N21C23N24123.5°120.0°
N21C23O33118.5°120.0°
C22N21C29119.1°120.0°
N21C22H22109.5°109.4°
N21C22H22A109.5°109.4°
N21C22H22B109.5°109.4°
N21C29C26112.5°109.5°
N21C29H29108.5°109.5°
N21C29H29A108.5°109.5°
H22C22H22A109.4°109.5°
H22C22H22B109.4°109.5°
H22AC22H22B109.5°109.5°
N24C23O33118.0°120.0°
C23N24C42127.8°120.0°
C23N24HN24116.1°120.0°
C42N24HN24116.1°120.0°
C29C26H26109.1°109.5°
C29C26H26A109.1°109.5°
C26C29H29108.5°109.5°
C26C29H29A108.4°109.4°
H26C26H26A109.8°109.5°
H29C29H29A110.4°109.5°
O30C32O34122.2°120.0°
C32O34HO34109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°179.8°
C1C2O11C3179.6°180.0°
C1C2C3C12179.7°180.0°
C1C2C3C40.3°0.0°
C2C1C6C50.4°0.0°
C2C1C6H6179.6°179.8°
C1C2O11C158.2°0.0°
C6C1C2O11179.9°180.0°
C6C1C2C30.5°0.0°
C1C6C5C40.1°0.0°
C1C6C5H6180.0°179.7°
C1C6C5C9179.3°180.0°
H1C1C2O110.1°0.2°
H1C1C2C3179.5°179.8°
H1C1C6C5179.6°179.8°
H1C1C6H60.4°0.0°
O11C2C3C120.1°0.0°
O11C2C3C4179.9°180.0°
C2O11C15C26178.7°180.0°
C2O11C15H1561.3°60.0°
C2O11C15H15A58.7°60.0°
C2C3C12C4180.0°179.9°
C2C3C4C50.0°0.1°
C2C3C4O7179.6°180.0°
C3C2O11C15171.4°180.0°
C2C3C12C1794.6°90.0°
C2C3C12H12145.4°150.0°
C2C3C12H12A25.4°30.0°
C12C3C4C5180.0°180.0°
C12C3C4O70.4°0.1°
C3C12C17H12120.0°120.1°
C3C12C17H12A120.0°119.9°
C3C12H12H12A119.2°120.0°
C3C12C17C2063.5°180.0°
C3C12C17H1756.5°60.0°
C3C12C17H17A176.5°60.1°
C3C4C5O7179.7°180.0°
C3C4C5C60.0°0.0°
C3C4C5C9179.6°180.0°
C3C4O7N8179.5°180.0°
C4C3C12C1785.4°90.1°
C4C3C12H1234.6°30.0°
C4C3C12H12A154.6°150.0°
C4C5C6C9179.5°180.0°
C4C5C6H6179.8°179.8°
C5C4O7N80.1°0.1°
C4C5C9N81.4°0.0°
C4C5C9C14178.2°180.0°
O7C4C5C6179.7°180.0°
O7C4C5C90.7°0.0°
C4O7N8C91.0°0.1°
C6C5C9N8179.1°180.0°
C6C5C9C142.3°0.0°
C9C5C6H60.7°0.3°
C5C9N8O71.5°0.0°
C5C9N8C14176.5°180.0°
C5C9C14F4056.3°30.0°
C5C9C14F38177.9°90.0°
C5C9C14F3959.3°150.0°
O7N8C9C14178.0°180.0°
N8C9C14F40127.4°150.0°
N8C9C14F381.5°89.9°
N8C9C14F39117.1°30.0°
C9C14F40F38123.3°120.0°
C9C14F40F39114.4°120.0°
C9C14F38F39113.8°120.0°
C13C10C42H10180.0°179.7°
C10C13C16H13180.0°180.0°
C10C13C16C32179.5°180.0°
C10C13C16C180.4°0.0°
C13C10C42C190.4°0.0°
C13C10C42N24179.4°179.8°
C42C10C13C160.3°0.0°
C42C10C13H13179.7°180.0°
C10C42C19C180.1°0.0°
C10C42C19N24179.0°179.8°
C10C42C19H19179.9°180.0°
C10C42N24C2333.8°146.5°
C10C42N24HN24146.2°33.5°
H10C10C13C16179.7°179.7°
H10C10C13H130.3°0.3°
H10C10C42C19179.6°179.7°
H10C10C42N240.6°0.1°
O11C15C26H15120.0°120.0°
O11C15C26H15A120.0°120.0°
O11C15H15H15A121.5°120.0°
O11C15C26C2966.0°180.0°
O11C15C26H26174.0°60.0°
O11C15C26H26A54.0°60.0°
C17C12H12H12A119.2°120.0°
C12C17C20H17120.0°120.1°
C12C17C20H17A120.0°120.0°
C12C17H17H17A118.6°120.0°
C12C17C20H20180.0°180.0°
C12C17C20H20A60.0°60.0°
C12C17C20H20B60.0°60.0°
H12C12C17C20176.5°60.0°
H12C12C17H1763.5°180.0°
H12C12C17H17A56.5°60.0°
H12AC12C17C2056.5°60.0°
H12AC12C17H17176.5°60.0°
H12AC12C17H17A63.5°180.0°
C13C16C32C18179.1°180.0°
C13C16C18C190.9°0.0°
C13C16C18H18179.1°180.0°
C13C16C32O307.6°0.0°
C13C16C32O34171.5°180.0°
H13C13C16C320.5°0.0°
H13C13C16C18179.6°180.0°
F40C14F38F39119.3°120.0°
C26C15H15H15A121.5°120.0°
C15C26C29N21178.9°180.0°
C15C26C29H26120.0°120.0°
C15C26C29H26A120.0°120.0°
C15C26H26H26A119.5°120.0°
C15C26C29H2961.1°60.0°
C15C26C29H29A58.9°60.0°
H15C15C26C2954.0°60.0°
H15C15C26H2666.0°180.0°
H15C15C26H26A174.0°60.0°
H15AC15C26C29174.0°60.0°
H15AC15C26H2654.0°60.0°
H15AC15C26H26A66.0°NaN°
C32C16C18C19180.0°180.0°
C32C16C18H180.0°0.0°
C16C32O30O34179.1°180.0°
C16C32O34HO34179.2°180.0°
C16C18C19H18180.0°180.0°
C16C18C19C420.8°0.0°
C16C18C19H19179.2°180.0°
C18C16C32O30173.2°180.0°
C18C16C32O347.6°0.0°
C20C17H17H17A118.6°120.0°
C17C20H20H20A120.0°120.0°
C17C20H20H20B120.0°120.0°
C17C20H20AH20B120.0°119.9°
H17C17C20H2060.0°59.9°
H17C17C20H20A180.0°180.0°
H17C17C20H20B60.0°60.0°
H17AC17C20H2060.0°60.0°
H17AC17C20H20A60.0°60.0°
H17AC17C20H20B180.0°180.0°
C18C19C42H19180.0°180.0°
C18C19C42N24178.9°179.8°
H18C18C19C42179.2°180.0°
H18C18C19H190.8°0.0°
C19C42N24C23147.3°33.7°
C19C42N24HN2432.7°146.3°
H19C19C42N241.1°0.2°
H20C20H20AH20B120.0°120.1°
C23N21C22C29178.1°180.0°
C23N21C22H22180.0°90.0°
C23N21C22H22A60.0°30.0°
C23N21C22H22B60.0°150.0°
N21C23N24O33179.6°180.0°
N21C23N24C42177.3°174.7°
N21C23N24HN242.7°5.3°
C23N21C29C2678.8°90.0°
C23N21C29H2941.2°30.0°
C23N21C29H29A161.2°150.0°
N21C22H22H22A120.0°120.0°
N21C22H22H22B120.0°119.9°
N21C22H22AH22B120.0°119.9°
C22N21C23N240.3°0.0°
C22N21C23O33179.9°180.0°
C22N21C29C26103.2°90.0°
C22N21C29H29136.8°150.0°
C22N21C29H29A16.8°30.0°
C29N21C22H221.9°90.0°
C29N21C22H22A118.1°150.0°
C29N21C22H22B121.9°30.0°
C29N21C23N24178.4°180.0°
C29N21C23O332.0°0.1°
N21C29C26H29120.0°120.0°
N21C29C26H29A120.0°120.0°
N21C29C26H2661.1°60.0°
N21C29C26H26A58.9°60.0°
N21C29H29H29A118.8°120.0°
H22C22H22AH22B120.0°120.1°
C23N24C42HN24180.0°180.0°
O33C23N24C422.3°5.3°
O33C23N24HN24177.7°174.7°
C29C26H26H26A119.5°120.0°
C26C29H29H29A118.7°120.0°
H26C26C29H2958.9°60.0°
H26C26C29H29A178.9°180.0°
H26AC26C29H29178.9°180.0°
H26AC26C29H29A61.1°60.0°
O30C32O34HO340.0°0.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon