MH8
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
CA | CB1 | sing | 1.53Å | 1.54Å | |
CA | CB2 | sing | 1.53Å | 1.53Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CB2 | CG | sing | 1.53Å | 1.52Å | |
CG | CD | sing | 1.53Å | 1.53Å | |
CD | CE | sing | 1.51Å | 1.51Å | |
CE | CZ | doub | 1.31Å | 1.32Å | |
C | O | doub | 1.21Å | 1.21Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CB1 | HB11 | sing | 1.09Å | 1.10Å | |
CB1 | HB12 | sing | 1.09Å | 1.10Å | |
CB1 | HB13 | sing | 1.09Å | 1.10Å | |
CB2 | HB21 | sing | 1.09Å | 1.10Å | |
CB2 | HB22 | sing | 1.09Å | 1.10Å | |
CG | HG1 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CD | HD1 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CE | HE | sing | 1.08Å | 1.08Å | |
CZ | HZ1 | sing | 1.08Å | 1.08Å | |
CZ | HZ2 | sing | 1.08Å | 1.08Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | CB1 | 109.3° | 109.5° |
N | CA | CB2 | 107.7° | 109.5° |
N | CA | C | 109.2° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
CB1 | CA | CB2 | 110.2° | 109.4° |
CB1 | CA | C | 111.3° | 109.4° |
CA | CB1 | HB11 | 109.5° | 109.5° |
CA | CB1 | HB12 | 109.5° | 109.6° |
CA | CB1 | HB13 | 109.5° | 109.5° |
CB2 | CA | C | 108.9° | 109.5° |
CA | CB2 | CG | 111.8° | 109.5° |
CA | CB2 | HB21 | 108.9° | 109.5° |
CA | CB2 | HB22 | 108.9° | 109.5° |
CA | C | O | 121.1° | 120.0° |
CA | C | OXT | 116.4° | 120.0° |
CB2 | CG | CD | 110.4° | 109.5° |
CG | CB2 | HB21 | 108.9° | 109.5° |
CG | CB2 | HB22 | 108.9° | 109.4° |
CB2 | CG | HG1 | 109.3° | 109.5° |
CB2 | CG | HG2 | 109.2° | 109.4° |
CG | CD | CE | 108.9° | 109.4° |
CD | CG | HG1 | 109.2° | 109.5° |
CD | CG | HG2 | 109.2° | 109.5° |
CG | CD | HD1 | 109.6° | 109.5° |
CG | CD | HD2 | 109.6° | 109.5° |
CD | CE | CZ | 121.1° | 120.0° |
CE | CD | HD1 | 109.6° | 109.5° |
CE | CD | HD2 | 109.6° | 109.5° |
CD | CE | HE | 119.4° | 120.0° |
CZ | CE | HE | 119.4° | 120.0° |
CE | CZ | HZ1 | 120.0° | 120.0° |
CE | CZ | HZ2 | 120.0° | 120.0° |
O | C | OXT | 122.4° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.5° | 110.9° |
HB11 | CB1 | HB12 | 109.4° | 109.5° |
HB11 | CB1 | HB13 | 109.5° | 109.4° |
HB12 | CB1 | HB13 | 109.5° | 109.5° |
HB21 | CB2 | HB22 | 109.5° | 109.4° |
HG1 | CG | HG2 | 109.5° | 109.4° |
HD1 | CD | HD2 | 109.5° | 109.5° |
HZ1 | CZ | HZ2 | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | CB1 | CB2 | 118.2° | 120.0° |
N | CA | CB1 | C | 120.8° | 120.0° |
N | CA | CB2 | C | 118.4° | 120.0° |
N | CA | CB2 | CG | 173.6° | 55.0° |
N | CA | C | O | 137.9° | 145.0° |
N | CA | C | OXT | 42.4° | 35.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | CB1 | HB11 | 180.0° | 60.0° |
N | CA | CB1 | HB12 | 60.0° | 180.0° |
N | CA | CB1 | HB13 | 60.0° | 60.0° |
N | CA | CB2 | HB21 | 66.1° | 65.0° |
N | CA | CB2 | HB22 | 53.2° | 175.0° |
CB1 | CA | CB2 | C | 122.4° | 119.9° |
CB1 | CA | CB2 | CG | 67.2° | 65.0° |
CB1 | CA | C | O | 17.0° | 95.0° |
CB1 | CA | C | OXT | 163.2° | 85.0° |
CB1 | CA | N | H | 180.0° | 56.1° |
CB1 | CA | N | H2 | 60.0° | 180.0° |
CA | CB1 | HB11 | HB12 | 120.0° | 120.1° |
CA | CB1 | HB11 | HB13 | 120.0° | 119.9° |
CA | CB1 | HB12 | HB13 | 120.0° | 120.0° |
CB1 | CA | CB2 | HB21 | 53.1° | 174.9° |
CB1 | CA | CB2 | HB22 | 172.4° | 55.0° |
CA | CB2 | CG | HB21 | 120.4° | 120.0° |
CA | CB2 | CG | HB22 | 120.3° | 120.0° |
CA | CB2 | CG | CD | 176.6° | 180.0° |
CB2 | CA | C | O | 104.7° | 25.0° |
CB2 | CA | C | OXT | 75.1° | 155.0° |
CB2 | CA | N | H | 60.3° | 176.1° |
CB2 | CA | N | H2 | 59.7° | 60.0° |
CB2 | CA | CB1 | HB11 | 61.8° | 60.1° |
CB2 | CA | CB1 | HB12 | 178.3° | 60.0° |
CB2 | CA | CB1 | HB13 | 58.2° | 180.0° |
CA | CB2 | HB21 | HB22 | 118.9° | 120.0° |
CA | CB2 | CG | HG1 | 63.3° | 60.0° |
CA | CB2 | CG | HG2 | 56.5° | 60.0° |
C | CA | CB2 | CG | 55.2° | 175.0° |
CA | C | O | OXT | 179.7° | 180.0° |
C | CA | N | H | 57.9° | 63.9° |
C | CA | N | H2 | 177.9° | 60.0° |
C | CA | CB1 | HB11 | 59.2° | 180.0° |
C | CA | CB1 | HB12 | 60.8° | 60.0° |
C | CA | CB1 | HB13 | 179.2° | 60.1° |
C | CA | CB2 | HB21 | 175.5° | 55.0° |
C | CA | CB2 | HB22 | 65.2° | 65.0° |
CA | C | OXT | HXT | 179.8° | 180.0° |
CB2 | CG | CD | HG1 | 120.2° | 120.0° |
CB2 | CG | CD | HG2 | 120.1° | 120.0° |
CB2 | CG | CD | CE | 53.9° | 180.0° |
CG | CB2 | HB21 | HB22 | 118.9° | 119.9° |
CB2 | CG | HG1 | HG2 | 119.6° | 119.9° |
CB2 | CG | CD | HD1 | 66.0° | 60.0° |
CB2 | CG | CD | HD2 | 173.8° | 60.0° |
CG | CD | CE | HD1 | 119.9° | 120.0° |
CG | CD | CE | HD2 | 119.9° | 120.0° |
CG | CD | CE | CZ | 136.3° | 125.1° |
CD | CG | CB2 | HB21 | 56.2° | 59.9° |
CD | CG | CB2 | HB22 | 63.1° | 60.0° |
CD | CG | HG1 | HG2 | 119.6° | 120.0° |
CG | CD | HD1 | HD2 | 120.3° | 120.0° |
CG | CD | CE | HE | 43.7° | 55.0° |
CD | CE | CZ | HE | 180.0° | 179.9° |
CE | CD | CG | HG1 | 174.1° | 60.0° |
CE | CD | CG | HG2 | 66.2° | 60.0° |
CE | CD | HD1 | HD2 | 120.3° | 120.0° |
CD | CE | CZ | HZ1 | 180.0° | 0.1° |
CD | CE | CZ | HZ2 | 0.0° | 180.0° |
CZ | CE | CD | HD1 | 16.4° | 5.1° |
CZ | CE | CD | HD2 | 103.8° | 115.0° |
CE | CZ | HZ1 | HZ2 | 180.0° | 179.9° |
O | C | OXT | HXT | 0.0° | 0.0° |
HB11 | CB1 | HB12 | HB13 | 120.0° | 119.9° |
HB21 | CB2 | CG | HG1 | 176.4° | 180.0° |
HB21 | CB2 | CG | HG2 | 63.9° | 60.1° |
HB22 | CB2 | CG | HG1 | 57.1° | 60.1° |
HB22 | CB2 | CG | HG2 | 176.8° | 180.0° |
HG1 | CG | CD | HD1 | 54.1° | 180.0° |
HG1 | CG | CD | HD2 | 66.0° | 60.0° |
HG2 | CG | CD | HD1 | 173.9° | 60.0° |
HG2 | CG | CD | HD2 | 53.7° | 180.0° |
HD1 | CD | CE | HE | 163.6° | 175.0° |
HD2 | CD | CE | HE | 76.2° | 65.0° |
HE | CE | CZ | HZ1 | 0.1° | 180.0° |
HE | CE | CZ | HZ2 | 180.0° | 0.1° |