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L5K

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OAVCAUdoub1.21Å1.23Å
CAYCAXsing1.53Å1.54Å
CAYCAWsing1.53Å1.53Å
CAXCAWsing1.53Å1.52Å
CAUCAWsing1.51Å1.51Å
CAUNATsing1.35Å1.34Å
CARCAQdoub1.38Å1.39ÅAromatic
CARCASsing1.39Å1.40ÅAromatic
CAQCAPsing1.38Å1.39ÅAromatic
CAWOAZsing1.43Å1.44Å
CASNATsing1.40Å1.36Å
CASCBAdoub1.39Å1.41ÅAromatic
CAPCAOdoub1.39Å1.40ÅAromatic
CBACAOsing1.39Å1.40ÅAromatic
CAONANsing1.40Å1.35Å
NANSAMsing1.66Å1.66Å
OBBSAMdoub1.42Å1.48Å
SAMOBCdoub1.42Å1.50Å
SAMCALsing1.76Å1.72Å
CAKCALdoub1.39Å1.38ÅAromatic
CAKCAJsing1.38Å1.39ÅAromatic
CALCBDsing1.38Å1.40ÅAromatic
CAJCAIdoub1.39Å1.39ÅAromatic
CBDCBEdoub1.39Å1.41ÅAromatic
CAICBEsing1.40Å1.40ÅAromatic
CAIOAHsing1.35Å1.36ÅAromatic
CBECBFsing1.48Å1.41ÅAromatic
OAHCAGsing1.35Å1.34ÅAromatic
CBFCAGdoub1.40Å1.40ÅAromatic
CBFCBGsing1.39Å1.40ÅAromatic
CAGCAFsing1.39Å1.37ÅAromatic
CBGCAAdoub1.38Å1.39ÅAromatic
CAFCABdoub1.38Å1.39ÅAromatic
CAACABsing1.39Å1.40ÅAromatic
CABNACsing1.48Å1.34Å
NACOAEdoub1.22Å1.41Å
NACOADsing1.22Å1.41Å
CAXH1sing1.09Å1.10Å
CAXH2sing1.09Å1.10Å
CAYH3sing1.09Å1.10Å
CAYH4sing1.09Å1.10Å
OAZH5sing0.97Å0.95Å
NATH6sing0.97Å1.00Å
CBAH7sing1.08Å1.08Å
CARH8sing1.08Å1.08Å
CAQH9sing1.08Å1.08Å
CAPH10sing1.08Å1.08Å
NANH11sing0.97Å1.00Å
CBDH12sing1.08Å1.08Å
CBGH13sing1.08Å1.08Å
CAAH14sing1.08Å1.08Å
CAFH15sing1.08Å1.08Å
CAJH16sing1.08Å1.08Å
CAKH17sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OAVCAUCAW119.4°120.0°
OAVCAUNAT127.5°120.0°
CAXCAYCAW59.5°60.0°
CAYCAXCAW59.7°60.0°
CAYCAXH1120.0°117.5°
CAYCAXH2120.0°117.6°
CAXCAYH3120.1°117.5°
CAXCAYH4120.1°117.5°
CAYCAWCAX60.8°60.0°
CAYCAWCAU116.5°117.5°
CAYCAWOAZ118.5°117.5°
CAWCAYH3120.1°117.5°
CAWCAYH4120.1°117.5°
CAXCAWCAU116.9°117.5°
CAXCAWOAZ117.0°117.5°
CAWCAXH1120.1°117.5°
CAWCAXH2120.0°117.5°
CAWCAUNAT113.1°120.0°
CAUCAWOAZ115.9°115.6°
CAUNATCAS126.9°120.0°
CAUNATH6116.6°120.0°
CAQCARCAS120.2°120.0°
CARCAQCAP119.8°120.1°
CAQCARH8120.0°120.0°
CARCAQH9120.1°119.9°
CARCASNAT122.1°120.0°
CARCASCBA119.2°120.0°
CASCARH8119.9°120.0°
CAQCAPCAO121.5°120.1°
CAPCAQH9120.1°119.9°
CAQCAPH10119.3°120.0°
CAWOAZH5109.5°113.9°
NATCASCBA118.6°120.1°
CASNATH6116.6°120.0°
CASCBACAO121.4°119.9°
CASCBAH7119.3°120.1°
CAPCAOCBA118.0°119.9°
CAPCAONAN117.3°120.0°
CAOCAPH10119.2°119.9°
CBACAONAN124.6°120.1°
CAOCBAH7119.3°120.1°
CAONANSAM127.2°120.0°
CAONANH11104.8°119.9°
NANSAMOBB109.4°106.4°
NANSAMOBC108.5°106.4°
NANSAMCAL112.2°107.2°
SAMNANH11104.9°120.0°
OBBSAMOBC108.2°123.1°
OBBSAMCAL109.5°106.4°
OBCSAMCAL108.9°106.4°
SAMCALCAK116.9°119.9°
SAMCALCBD122.5°119.9°
CALCAKCAJ120.4°120.6°
CAKCALCBD120.6°120.1°
CALCAKH17119.8°119.7°
CAKCAJCAI119.8°120.1°
CAKCAJH16120.1°120.0°
CAJCAKH17119.8°119.7°
CALCBDCBE119.4°119.7°
CALCBDH12120.3°120.2°
CAJCAICBE120.8°119.2°
CAJCAIOAH130.7°132.3°
CAICAJH16120.1°119.9°
CBDCBECAI119.0°120.3°
CBDCBECBF134.9°134.0°
CBECBDH12120.3°120.1°
CBECAIOAH108.5°108.6°
CAICBECBF106.1°105.7°
CAIOAHCAG109.7°111.5°
CBECBFCAG107.1°105.7°
CBECBFCBG134.0°134.0°
OAHCAGCBF108.6°108.5°
OAHCAGCAF129.6°132.3°
CAGCBFCBG118.9°120.2°
CBFCAGCAF121.8°119.2°
CBFCBGCAA119.5°119.7°
CBFCBGH13120.2°120.1°
CAGCAFCAB119.7°120.1°
CAGCAFH15120.1°120.0°
CBGCAACAB120.6°120.2°
CAACBGH13120.2°120.1°
CBGCAAH14119.7°120.0°
CAFCABCAA119.5°120.6°
CAFCABNAC117.9°119.7°
CABCAFH15120.2°119.9°
CAACABNAC122.6°119.7°
CABCAAH14119.7°119.9°
CABNACOAE120.5°120.0°
CABNACOAD121.0°120.1°
OAENACOAD118.2°119.9°
H1CAXH2109.5°115.5°
H3CAYH4109.4°115.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OAVCAUCAWCAY13.6°43.6°
OAVCAUCAWCAX55.4°25.0°
OAVCAUCAWNAT179.0°180.0°
OAVCAUCAWOAZ160.2°170.7°
OAVCAUNATCAS1.0°5.2°
OAVCAUNATH6178.9°174.8°
CAXCAYCAWH3109.3°107.5°
CAXCAYCAWH4109.3°107.5°
CAYCAXCAWH1109.4°107.5°
CAYCAXCAWH2109.4°107.6°
CAYCAXCAWCAU106.8°107.5°
CAXCAYCAWOAZ106.8°107.5°
CAYCAXH1H2144.9°145.7°
CAXCAYH3H4145.0°145.7°
CAYCAWCAUOAZ146.6°145.7°
CAYCAWCAUNAT167.4°136.4°
CAWCAYH3H4145.0°145.7°
CAYCAWOAZH5180.0°111.4°
CAXCAWCAUOAZ144.4°145.7°
CAXCAWCAUNAT123.6°155.0°
CAWCAXH1H2144.9°145.6°
CAXCAWOAZH5110.2°179.9°
CAWCAUNATCAS179.9°174.8°
CAUCAWCAXH1143.8°145.0°
CAUCAWCAXH22.6°0.1°
CAUCAWCAYH31.8°0.0°
CAUCAWCAYH4143.1°145.0°
CAUCAWOAZH534.2°34.3°
CAWCAUNATH60.0°5.2°
CAUNATCASCAR34.3°33.5°
NATCAUCAWOAZ20.8°9.3°
CAUNATCASH6180.0°180.0°
CAUNATCASCBA148.2°146.8°
CAQCARCASH8180.0°180.0°
CARCAQCAPH9180.0°180.0°
CAQCARCASNAT178.5°180.0°
CAQCARCASCBA0.9°0.2°
CARCAQCAPCAO0.0°0.3°
CARCAQCAPH10180.0°180.0°
CASCARCAQCAP0.5°0.0°
CARCASNATCBA177.6°179.7°
CARCASCBACAO0.9°0.3°
CARCASNATH6145.8°146.6°
CARCASCBAH7179.2°179.7°
CASCARCAQH9179.5°180.0°
CAQCAPCAOH10180.0°179.7°
CAQCAPCAOCBA0.1°0.2°
CAQCAPCAONAN179.5°179.7°
CAPCAQCARH8179.5°180.0°
OAZCAWCAXH10.2°0.1°
OAZCAWCAXH2141.4°145.0°
OAZCAWCAYH3143.9°145.1°
OAZCAWCAYH42.6°0.0°
NATCASCBACAO178.5°180.0°
NATCASCBAH71.5°0.0°
NATCASCARH81.5°0.0°
CASCBACAOCAP0.3°0.0°
CASCBACAOH7180.0°180.0°
CASCBACAONAN179.0°180.0°
CBACASNATH631.8°33.1°
CBACASCARH8179.0°179.7°
CAPCAOCBANAN179.4°179.9°
CAPCAONANSAM158.5°45.2°
CAPCAOCBAH7179.7°179.9°
CAOCAPCAQH9180.0°179.8°
CAPCAONANH1179.1°134.8°
CBACAONANSAM22.1°134.7°
CBACAOCAPH10179.9°179.9°
CBACAONANH11100.2°45.3°
CAONANSAMH11122.3°180.0°
CAONANSAMOBB59.4°50.8°
CAONANSAMOBC177.3°176.3°
CAONANSAMCAL62.4°62.8°
NANCAOCBAH71.0°0.0°
NANCAOCAPH100.5°0.0°
NANSAMOBBOBC118.0°122.9°
NANSAMOBBCAL123.4°114.1°
NANSAMOBCCAL122.4°114.1°
NANSAMCALCAK36.5°84.9°
NANSAMCALCBD144.7°95.4°
OBBSAMOBCCAL119.0°123.0°
OBBSAMCALCAK158.2°161.5°
OBBSAMCALCBD23.0°18.1°
OBBSAMNANH1162.9°129.2°
OBCSAMCALCAK83.6°28.6°
OBCSAMCALCBD95.1°151.1°
OBCSAMNANH1154.9°3.7°
SAMCALCAKCBD178.8°179.7°
SAMCALCAKCAJ179.4°179.7°
SAMCALCBDCBE179.5°180.0°
CALSAMNANH11175.3°117.3°
SAMCALCBDH120.5°0.1°
SAMCALCAKH170.6°0.1°
CALCAKCAJH17180.0°179.6°
CALCAKCAJCAI0.1°0.6°
CAKCALCBDCBE0.8°0.3°
CAKCALCBDH12179.2°179.7°
CALCAKCAJH16179.9°179.7°
CAJCAKCALCBD0.6°0.6°
CAKCAJCAIH16180.0°179.8°
CAKCAJCAICBE0.6°0.3°
CAKCAJCAIOAH180.0°179.7°
CALCBDCBEH12180.0°179.9°
CALCBDCBECAI0.3°0.0°
CALCBDCBECBF179.5°180.0°
CBDCALCAKH17179.4°179.8°
CAJCAICBECBD0.4°0.0°
CAJCAICBEOAH179.5°180.0°
CAJCAICBECBF179.7°180.0°
CAJCAIOAHCAG179.3°180.0°
CAICAJCAKH17179.9°179.8°
CBDCBECAICBF179.9°180.0°
CBDCBECAIOAH179.9°180.0°
CBDCBECBFCAG179.7°180.0°
CBDCBECBFCBG0.2°0.0°
CBECAIOAHCAG0.2°0.0°
CAICBECBFCAG0.5°0.0°
CAICBECBFCBG180.0°180.0°
CAICBECBDH12179.7°180.0°
CBECAICAJH16179.4°180.0°
OAHCAICBECBF0.2°0.0°
CAIOAHCAGCBF0.5°0.0°
CAIOAHCAGCAF179.9°179.9°
OAHCAICAJH160.0°0.0°
CBECBFCAGOAH0.6°0.0°
CBECBFCAGCBG179.6°180.0°
CBECBFCAGCAF179.9°179.9°
CBECBFCBGCAA179.6°180.0°
CBFCBECBDH120.4°0.0°
CBECBFCBGH130.4°0.0°
OAHCAGCBFCAF179.5°179.9°
OAHCAGCBFCBG179.8°180.0°
OAHCAGCAFCAB179.6°180.0°
OAHCAGCAFH150.4°0.1°
CAGCBFCBGCAA0.2°0.0°
CBFCAGCAFCAB0.2°0.1°
CAGCBFCBGH13179.8°180.0°
CBFCAGCAFH15179.8°180.0°
CBGCBFCAGCAF0.3°0.1°
CBFCBGCAAH13180.0°180.0°
CBFCBGCAACAB0.1°0.0°
CBFCBGCAAH14179.9°180.0°
CAGCAFCABH15180.0°180.0°
CAGCAFCABCAA0.0°0.0°
CAGCAFCABNAC178.9°180.0°
CBGCAACABCAF0.2°0.0°
CBGCAACABH14180.0°180.0°
CBGCAACABNAC179.0°180.0°
CAFCABCAANAC178.8°180.0°
CAFCABNACOAE14.4°180.0°
CAFCABNACOAD159.2°0.0°
CAFCABCAAH14179.8°180.0°
CAACABNACOAE166.7°0.0°
CAACABNACOAD19.7°180.0°
CABCAACBGH13179.9°180.0°
CAACABCAFH15180.0°180.0°
CABNACOAEOAD173.8°180.0°
NACCABCAAH141.0°0.0°
NACCABCAFH151.1°0.0°
H1CAXCAYH3141.2°145.0°
H1CAXCAYH40.1°0.0°
H2CAXCAYH30.0°0.0°
H2CAXCAYH4141.3°145.0°
H8CARCAQH90.5°0.0°
H9CAQCAPH100.0°0.1°
H13CBGCAAH140.1°0.0°
H16CAJCAKH170.1°0.1°

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PDB entries from 2024-09-11

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