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JYP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O17P3doub1.48Å1.51Å
O18P3sing1.61Å1.52Å
P3O15sing1.61Å1.68Å
P3O16sing1.61Å1.51Å
O15C7sing1.43Å1.46Å
C6O1sing1.44Å1.47Å
C6C7sing1.54Å1.49Å
C6N5sing1.47Å1.45Å
O1C9sing1.44Å1.48Å
C7C8sing1.54Å1.46Å
C9C8sing1.55Å1.49Å
C9C10sing1.53Å1.50Å
C8O3sing1.43Å1.46Å
N1C1doub1.32Å1.37ÅAromatic
N1C2sing1.33Å1.34ÅAromatic
C1N2sing1.32Å1.35ÅAromatic
N5C2sing1.37Å1.28ÅAromatic
N5C5sing1.36Å1.29ÅAromatic
C2C3doub1.41Å1.42ÅAromatic
C5N4doub1.30Å1.38ÅAromatic
N2C4doub1.33Å1.33ÅAromatic
C3N4sing1.35Å1.54ÅAromatic
C3C4sing1.40Å1.35ÅAromatic
O14C12sing1.43Å1.39Å
C4N3sing1.38Å1.46Å
O2C10sing1.43Å1.42Å
C11O3sing1.43Å1.43Å
C11C12sing1.53Å1.52Å
C11O4sing1.43Å1.40Å
C12C13sing1.53Å1.55Å
O4C15sing1.43Å1.41Å
C15C16sing1.53Å1.54Å
C15C14sing1.53Å1.52Å
O5C16sing1.43Å1.40Å
O6C14sing1.43Å1.41Å
O6P1sing1.61Å1.68Å
C13C14sing1.53Å1.52Å
C13O10sing1.43Å1.39Å
O10P2sing1.61Å1.65Å
O8P1doub1.48Å1.51Å
P1O9sing1.61Å1.51Å
P1O7sing1.61Å1.51Å
P2O13doub1.48Å1.51Å
P2O12sing1.61Å1.51Å
P2O11sing1.61Å1.51Å
C1H1sing1.08Å1.08Å
N3H2sing0.97Å1.00Å
N3H3sing0.97Å1.00Å
C5H4sing1.08Å1.08Å
C6H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C8H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C10H9sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
O2H11sing0.97Å0.95Å
C11H12sing1.09Å1.10Å
C12H13sing1.09Å1.10Å
C13H14sing1.09Å1.10Å
C14H15sing1.09Å1.10Å
C15H16sing1.09Å1.10Å
C16H17sing1.09Å1.10Å
C16H18sing1.09Å1.10Å
O5H19sing0.97Å0.95Å
O7H20sing0.97Å0.95Å
O9H21sing0.97Å0.95Å
O11H22sing0.97Å0.95Å
O12H23sing0.97Å0.95Å
O14H24sing0.97Å0.95Å
O16H25sing0.97Å0.95Å
O18H26sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O17P3O18109.4°109.5°
O17P3O15109.5°109.5°
O17P3O16109.5°109.5°
O18P3O15109.4°109.5°
O18P3O16109.5°109.4°
P3O18H26109.5°114.0°
O15P3O16109.6°109.5°
P3O15C7118.5°123.0°
P3O16H25109.5°114.0°
O15C7C6109.8°110.5°
O15C7C8109.7°110.5°
O15C7H6109.9°110.5°
O1C6C7108.3°104.8°
O1C6N5109.7°110.3°
C6O1C9107.4°105.3°
O1C6H5109.6°110.4°
C7C6N5109.7°110.4°
C6C7C8108.0°104.1°
C7C6H5109.4°110.4°
C6C7H6109.5°110.6°
C6N5C2117.9°126.2°
C6N5C5117.9°126.3°
N5C6H5110.0°110.4°
O1C9C8108.2°104.8°
O1C9C10109.7°110.4°
O1C9H8109.9°110.5°
C7C8C9108.0°104.1°
C7C8O3109.6°110.5°
C8C7H6110.0°110.5°
C7C8H7110.1°110.5°
C8C9C10109.7°110.4°
C9C8O3109.7°110.5°
C9C8H7109.5°110.6°
C8C9H8109.7°110.4°
C9C10O2109.5°109.5°
C10C9H8109.6°110.3°
C9C10H9109.5°109.5°
C9C10H10109.5°109.4°
C8O3C11109.6°114.0°
O3C8H7109.9°110.4°
C1N1C2118.9°120.7°
N1C1N2120.1°122.5°
N1C1H1120.0°118.7°
N1C2N5134.6°135.0°
N1C2C3120.9°119.0°
C1N2C4121.8°121.2°
N2C1H1119.9°118.8°
C2N5C5120.1°107.5°
N5C2C3103.8°106.0°
N5C5N4107.9°110.0°
N5C5H4126.0°125.0°
C2C3N4106.2°107.1°
C2C3C4118.2°118.2°
C5N4C3102.0°109.5°
N4C5H4126.0°125.0°
N2C4C3120.1°118.5°
N2C4N3119.7°120.7°
N4C3C4134.8°134.7°
C3C4N3119.8°120.8°
O14C12C11109.4°109.5°
O14C12C13109.3°109.5°
O14C12H13110.7°109.6°
C12O14H24109.5°114.0°
C4N3H2109.5°119.9°
C4N3H3109.5°120.0°
O2C10H9109.5°109.5°
O2C10H10109.5°109.5°
C10O2H11109.5°114.0°
O3C11C12109.3°109.5°
O3C11O4109.4°109.4°
O3C11H12109.7°109.5°
C12C11O4109.8°109.4°
C11C12C13109.8°109.2°
C12C11H12108.5°109.5°
C11C12H13109.0°109.6°
C11O4C15115.7°114.1°
O4C11H12110.2°109.5°
C12C13C14109.8°109.1°
C12C13O10109.4°109.6°
C13C12H13108.6°109.6°
C12C13H14108.7°109.6°
O4C15C16109.3°109.5°
O4C15C14109.7°109.4°
O4C15H16110.5°109.5°
C16C15C14109.4°109.5°
C15C16O5109.6°109.4°
C16C15H16108.9°109.5°
C15C16H17109.5°109.5°
C15C16H18109.5°109.5°
C15C14O6109.4°109.6°
C15C14C13109.6°109.2°
C15C14H15108.9°109.5°
C14C15H16109.0°109.5°
O5C16H17109.4°109.4°
O5C16H18109.5°109.5°
C16O5H19109.5°114.0°
C14O6P1118.4°123.1°
O6C14C13109.3°109.6°
O6C14H15110.6°109.5°
O6P1O8109.5°109.5°
O6P1O9109.5°109.4°
O6P1O7109.5°109.5°
C14C13O10109.3°109.5°
C14C13H14108.9°109.6°
C13C14H15108.9°109.5°
C13O10P2118.4°123.0°
O10C13H14110.8°109.6°
O10P2O13109.5°109.5°
O10P2O12109.6°109.5°
O10P2O11109.5°109.5°
O8P1O9109.5°109.4°
O8P1O7109.4°109.5°
O9P1O7109.5°109.5°
P1O9H21109.5°114.0°
P1O7H20109.5°114.0°
O13P2O12109.4°109.5°
O13P2O11109.5°109.5°
O12P2O11109.5°109.5°
P2O12H23109.5°114.1°
P2O11H22109.5°114.0°
H2N3H3109.5°120.0°
H9C10H10109.4°109.5°
H17C16H18109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O17P3O18O15120.0°120.0°
O17P3O18O16119.9°120.0°
O17P3O15O16120.1°120.0°
O17P3O15C787.4°55.0°
O17P3O16H250.0°180.0°
O17P3O18H260.0°59.9°
O18P3O15O16120.0°119.9°
O18P3O15C7152.6°175.1°
O18P3O16H25119.9°60.0°
P3O15C7C6113.7°121.5°
P3O15C7C84.9°123.9°
P3O15C7H6125.9°1.3°
O15P3O16H25120.1°59.9°
O15P3O18H26119.9°180.0°
O16P3O15C732.6°65.0°
O16P3O18H26120.0°60.0°
O15C7C6O1120.6°142.6°
O15C7C6C8119.5°118.6°
O15C7C6H6120.7°122.7°
O15C7C6N5119.6°98.6°
O15C7C8H6120.9°122.6°
O15C7C8C9120.2°118.7°
O15C7C8O3120.4°122.7°
O15C7C6H51.2°23.8°
O15C7C8H70.6°0.1°
O1C6C7N5119.8°118.8°
O1C6C7H5119.5°118.8°
O1C6N5H5120.7°122.3°
O1C6C7C81.1°24.0°
C6O1C9C80.8°40.5°
C6O1C9C10120.5°159.4°
O1C6N5C240.7°156.5°
O1C6N5C5161.9°23.6°
O1C6C7H6118.7°94.7°
C6O1C9H8118.9°78.4°
C7C6N5H5120.4°122.4°
C7C6O1C91.2°40.5°
C6C7C8H6119.5°118.7°
C6C7C8C90.6°0.0°
C6C7C8O3120.0°118.7°
C7C6N5C2159.6°88.2°
C7C6N5C543.0°91.8°
C6C7C8H7119.0°118.8°
N5C6O1C9120.9°159.4°
N5C6C7C8120.9°142.8°
C6N5C2N113.2°0.0°
C6N5C2C5156.9°180.0°
C6N5C2C3156.5°180.0°
C6N5C5N4156.3°179.9°
C6N5C5H423.7°0.0°
N5C6C7H61.1°24.1°
O1C9C8C70.2°24.0°
O1C9C8C10119.6°118.8°
O1C9C8H8119.9°118.9°
O1C9C10H8120.7°122.3°
O1C9C8O3119.2°94.7°
O1C9C10O250.7°69.6°
C9O1C6H5118.1°78.3°
O1C9C8H7120.0°142.7°
O1C9C10H9170.7°170.3°
O1C9C10H1069.3°50.4°
C7C8C9O3119.4°118.6°
C7C8C9H7119.9°118.7°
C7C8C9C10119.8°142.8°
C7C8O3H7121.1°122.6°
C7C8O3C1198.3°150.1°
C8C7C6H5118.4°94.8°
C7C8C9H8119.8°95.0°
C8C9C10H8120.5°122.3°
C9C8O3H7120.5°122.7°
C8C9C10O2169.4°175.0°
C9C8O3C11143.3°95.3°
C9C8C7H6118.9°118.7°
C8C9C10H970.6°55.0°
C8C9C10H1049.4°65.0°
C10C9C8O30.4°24.2°
C9C10O2H9120.0°120.0°
C9C10O2H10120.0°119.9°
C10C9C8H7120.3°98.5°
C9C10H9H10120.0°119.9°
C9C10O2H11180.0°180.0°
C8O3C11C12120.0°170.0°
C8O3C11O4119.8°70.1°
O3C8C7H60.6°0.1°
O3C8C9H8120.9°146.4°
C8O3C11H121.1°50.0°
N1C1N2H1180.0°179.8°
C1N1C2N5168.0°180.0°
C1N1C2C30.4°0.0°
N1C1N2C41.7°0.0°
C2N1C1N21.1°0.0°
N1C2N5C3169.7°180.0°
N1C2N5C5170.1°180.0°
N1C2C3N4171.5°180.0°
N1C2C3C40.1°0.0°
C2N1C1H1178.9°179.7°
C1N2C4C31.4°0.1°
C1N2C4N3173.9°180.0°
C2N5C5N40.6°0.0°
N5C2C3N40.0°0.0°
N5C2C3C4171.4°180.0°
C2N5C5H4179.4°180.0°
C2N5C6H580.1°34.2°
C5N5C2C30.4°0.0°
N5C5N4H4180.0°180.0°
N5C5N4C30.4°0.0°
C5N5C6H577.4°145.8°
C2C3N4C50.3°0.0°
C2C3C4N20.6°0.1°
C2C3N4C4169.3°180.0°
C2C3C4N3173.1°180.0°
C5N4C3C4169.5°180.0°
N2C4C3N4168.9°179.9°
N2C4C3N3172.5°179.9°
C4N2C1H1178.4°179.8°
N2C4N3H20.0°180.0°
N2C4N3H3120.0°0.1°
N4C3C4N318.6°0.0°
C3N4C5H4179.5°180.0°
C3C4N3H2172.5°0.0°
C3C4N3H352.5°180.0°
O14C12C11O3144.0°62.6°
O14C12C11C13120.0°119.8°
O14C12C11H13121.2°120.2°
O14C12C11O496.0°177.5°
O14C12C13H13120.9°120.2°
O14C12C13C1457.0°176.8°
O14C12C13O1062.9°57.0°
O14C12C11H1224.4°57.5°
O14C12C13H14176.0°63.2°
C4N3H2H3120.0°179.9°
O2C10C9H870.1°52.7°
O2C10H9H10120.0°120.1°
O3C11C12O4120.0°119.9°
O3C11C12H12119.6°120.0°
O3C11O4H12120.7°120.0°
O3C11C12C1396.0°177.6°
O3C11O4C15161.8°178.8°
C11O3C8H722.8°27.4°
O3C11C12H1322.8°57.6°
C12C11O4H12119.4°120.1°
C11C12C13H13119.1°120.0°
C12C11O4C1541.9°61.2°
C11C12C13C1463.0°57.0°
C11C12C13O10177.1°62.8°
C11C12C13H1456.1°176.9°
C11C12O14H24180.0°60.1°
O4C11C12C1323.9°57.6°
C11O4C15C16169.5°178.9°
C11O4C15C1470.5°61.1°
O4C11C12H13142.8°62.3°
C11O4C15H1649.7°58.8°
C12C13C14C1535.8°56.9°
C12C13C14O684.2°177.0°
C12C13C14O10119.9°119.9°
C12C13C14H14118.9°119.9°
C12C13O10H14119.8°120.3°
C12C13O10P2166.6°120.0°
C13C12C11H12144.4°62.4°
C12C13C14H15154.8°62.9°
C13C12O14H2459.8°179.7°
O4C15C16C14120.1°119.9°
O4C15C16H16120.8°120.1°
O4C15C14H16121.1°120.0°
O4C15C16O5141.7°65.1°
O4C15C14O6144.5°177.6°
O4C15C14C1324.6°57.5°
C15O4C11H1277.5°58.9°
O4C15C14H1594.5°62.3°
O4C15C16H1721.7°54.9°
O4C15C16H1898.3°174.9°
C16C15C14H16118.9°120.0°
C15C16O5H17120.0°120.0°
C15C16O5H18120.0°120.0°
C16C15C14O695.6°62.4°
C16C15C14C13144.5°177.6°
C16C15C14H1525.4°57.7°
C15C16H17H18120.0°120.1°
C15C16O5H19180.0°180.0°
C14C15C16O598.1°175.0°
C15C14O6C13120.0°119.8°
C15C14O6H15120.0°120.1°
C15C14O6P1119.2°120.2°
C15C14C13H15119.1°119.8°
C15C14C13O10155.7°62.9°
C15C14C13H1483.1°176.9°
C14C15C16H17141.8°65.1°
C14C15C16H1821.9°55.0°
O5C16C15H1620.9°55.0°
O5C16H17H18119.9°120.0°
O6C14C13H15121.0°120.1°
O6C14C13O1035.8°57.1°
C14O6P1O892.9°54.9°
C14O6P1O9147.0°65.0°
C14O6P1O727.0°175.0°
O6C14C13H14156.9°63.1°
O6C14C15H1623.3°57.6°
P1O6C14C13120.8°120.0°
O6P1O8O9120.1°120.0°
O6P1O8O7120.0°120.1°
O6P1O9O7120.1°120.0°
P1O6C14H150.8°0.1°
O6P1O7H20120.0°179.9°
O6P1O9H21120.0°60.0°
C14C13O10H14120.0°120.2°
C14C13O10P273.2°120.4°
C14C13C12H13177.9°63.0°
C13C14C15H1696.5°62.4°
C13O10P2O13142.7°54.9°
C13O10P2O1222.7°65.0°
C13O10P2O1197.3°175.0°
O10C13C12H1358.0°177.2°
O10C13C14H1585.2°177.2°
O10P2O13O12120.1°120.0°
O10P2O13O11120.0°120.0°
O10P2O12O11120.0°120.0°
P2O10C13H1446.8°0.3°
O10P2O11H22120.0°179.9°
O10P2O12H23120.0°60.0°
O8P1O9O7119.9°120.0°
O8P1O7H200.0°60.0°
O8P1O9H210.0°180.0°
O9P1O7H20120.0°59.9°
O7P1O9H21119.9°60.0°
O13P2O12O11120.0°120.0°
O13P2O11H220.0°60.0°
O13P2O12H230.0°180.0°
O12P2O11H22119.9°60.0°
O11P2O12H23120.0°60.0°
H5C6C7H6121.9°146.5°
H6C7C8H7121.6°122.5°
H7C8C9H80.1°23.8°
H8C9C10H949.9°67.3°
H8C9C10H10169.9°172.7°
H9C10O2H1160.0°60.0°
H10C10O2H1160.0°60.0°
H12C11C12H1396.8°177.6°
H13C12C13H1463.0°57.0°
H13C12O14H2459.9°60.1°
H14C13C14H1535.9°57.0°
H15C14C15H16144.4°177.7°
H16C15C16H1799.1°174.9°
H16C15C16H18140.9°65.0°
H17C16O5H1959.9°60.0°
H18C16O5H1960.0°60.0°

218853

PDB entries from 2024-04-24

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