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SummaryGeometryRelated PDB entries

J9D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N11C10sing1.39Å1.46Å
C10N09doub1.33Å1.32ÅAromatic
C10C12sing1.39Å1.39ÅAromatic
N09C08sing1.32Å1.33ÅAromatic
O20C19sing1.43Å1.41Å
C12C13doub1.39Å1.39ÅAromatic
C08N07sing1.39Å1.45Å
C08N22doub1.32Å1.30ÅAromatic
N07C06sing1.39Å1.46Å
C05C06doub1.39Å1.38ÅAromatic
C05C04sing1.38Å1.38ÅAromatic
C13N22sing1.33Å1.32ÅAromatic
C13N14sing1.40Å1.32Å
C06C23sing1.39Å1.40ÅAromatic
C21N14sing1.37Å1.33ÅAromatic
C21C17doub1.35Å1.39ÅAromatic
C04C03doub1.40Å1.38ÅAromatic
N14C15sing1.36Å1.33ÅAromatic
C19C18sing1.53Å1.53Å
C17C18sing1.51Å1.53Å
C17N16sing1.34Å1.33ÅAromatic
C23C24doub1.38Å1.38ÅAromatic
C15N16doub1.30Å1.32ÅAromatic
C03C24sing1.40Å1.38ÅAromatic
C03C02sing1.43Å1.53Å
C02N01trip1.14Å1.13Å
C15H1sing1.08Å1.08Å
C21H2sing1.08Å1.08Å
C24H3sing1.08Å1.08Å
C04H4sing1.08Å1.08Å
C05H5sing1.08Å1.08Å
C12H6sing1.08Å1.08Å
C18H7sing1.09Å1.10Å
C18H8sing1.09Å1.10Å
C19H9sing1.09Å1.10Å
C19H10sing1.09Å1.10Å
C23H11sing1.08Å1.08Å
N07H12sing0.97Å1.00Å
N11H13sing0.97Å1.00Å
N11H14sing0.97Å1.00Å
O20H15sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N11C10N09121.3°120.5°
N11C10C12120.3°120.4°
C10N11H13109.5°120.0°
C10N11H14109.5°120.0°
N09C10C12118.5°119.1°
C10N09C08121.2°120.7°
C10C12C13118.7°118.4°
C10C12H6120.6°120.8°
N09C08N07118.6°119.1°
N09C08N22121.0°121.7°
O20C19C18110.3°109.5°
O20C19H9109.3°109.4°
O20C19H10109.3°109.5°
C19O20H15109.5°114.0°
C12C13N22118.6°119.1°
C12C13N14121.6°120.4°
C13C12H6120.7°120.7°
N07C08N22120.4°119.2°
C08N07C06128.1°120.0°
C08N07H12116.0°120.0°
C08N22C13121.9°120.9°
N07C06C05117.0°119.9°
N07C06C23123.3°119.9°
C06N07H12116.0°120.0°
C06C05C04120.2°120.1°
C05C06C23119.6°120.1°
C06C05H5119.9°120.0°
C05C04C03120.0°119.9°
C05C04H4120.0°120.1°
C04C05H5119.9°119.9°
N22C13N14119.7°120.5°
C13N14C21126.5°126.4°
C13N14C15125.3°126.5°
C06C23C24120.0°120.0°
C06C23H11120.0°120.0°
N14C21C17107.3°106.8°
C21N14C15108.2°107.0°
N14C21H2126.3°126.6°
C21C17C18127.5°125.9°
C21C17N16106.4°108.2°
C17C21H2126.4°126.6°
C04C03C24120.4°119.9°
C04C03C02118.7°120.0°
C03C04H4120.0°120.0°
N14C15N16109.2°108.6°
N14C15H1125.4°125.7°
C19C18C17115.2°109.5°
C19C18H7108.0°109.4°
C19C18H8108.0°109.5°
C18C19H9109.3°109.4°
C18C19H10109.2°109.5°
C18C17N16126.1°125.9°
C17C18H7108.0°109.4°
C17C18H8108.0°109.5°
C17N16C15108.8°109.4°
C23C24C03119.7°119.9°
C23C24H3120.1°120.0°
C24C23H11120.0°120.0°
N16C15H1125.4°125.7°
C24C03C02120.9°120.1°
C03C24H3120.1°120.0°
C03C02N01179.0°179.9°
H7C18H8109.5°109.5°
H9C19H10109.5°109.5°
H13N11H14109.5°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N11C10N09C12178.7°179.8°
N11C10N09C08179.5°179.7°
N11C10C12C13179.1°179.7°
N11C10C12H60.8°0.3°
C10N11H13H14120.0°180.0°
N09C10C12C132.2°0.0°
C10N09C08N07179.5°180.0°
C10N09C08N221.1°0.1°
N09C10C12H6177.8°179.9°
N09C10N11H130.0°0.1°
N09C10N11H14120.0°179.9°
C12C10N09C081.8°0.0°
C10C12C13H6180.0°179.9°
C10C12C13N221.9°0.0°
C10C12C13N14179.6°180.0°
C12C10N11H13178.6°179.7°
C12C10N11H1461.3°0.3°
N09C08N07N22179.4°180.0°
N09C08N07C06179.2°5.5°
N09C08N22C130.8°0.1°
N09C08N07H120.9°174.5°
O20C19C18H9120.1°119.9°
O20C19C18H10120.1°120.1°
O20C19C18C1758.9°180.0°
O20C19C18H762.0°60.1°
O20C19C18H8179.7°60.0°
O20C19H9H10119.6°120.0°
C12C13N22C081.2°0.0°
C12C13N22N14177.7°179.9°
C12C13N14C216.6°180.0°
C12C13N14C15175.4°0.1°
C08N07C06H12180.0°180.0°
C08N07C06C05164.3°146.2°
N07C08N22C13179.9°180.0°
C08N07C06C2316.7°34.1°
N22C08N07C061.5°174.4°
C08N22C13N14178.9°180.0°
N22C08N07H12178.5°5.6°
N07C06C05C23179.0°179.8°
N07C06C05C04179.6°180.0°
N07C06C23C24179.7°179.7°
N07C06C05H50.4°0.3°
N07C06C23H110.3°0.2°
C06C05C04H5180.0°179.7°
C06C05C04C030.4°0.0°
C05C06C23C240.7°0.5°
C06C05C04H4179.6°180.0°
C05C06C23H11179.3°180.0°
C05C06N07H1215.7°33.8°
C04C05C06C230.6°0.3°
C05C04C03H4180.0°180.0°
C05C04C03C240.4°0.0°
C05C04C03C02179.9°180.0°
N22C13N14C21171.1°0.1°
N22C13N14C156.9°180.0°
N22C13C12H6178.1°179.9°
C13N14C21C15178.3°179.9°
C13N14C21C17178.7°179.7°
C13N14C15N16179.0°180.0°
C13N14C15H11.1°0.4°
C13N14C21H21.3°0.1°
N14C13C12H60.4°0.0°
C06C23C24H11180.0°179.5°
C06C23C24C030.7°0.5°
C06C23C24H3179.2°179.8°
C23C06C05H5179.5°179.9°
C23C06N07H12163.3°145.9°
N14C21C17H2180.0°179.8°
N14C21C17C18179.7°179.9°
N14C21C17N160.0°0.4°
C21N14C15N160.7°0.1°
C21N14C15H1179.4°179.7°
C17C21N14C150.4°0.2°
C21C17C18C191.6°124.6°
C21C17C18N16179.6°179.5°
C21C17N16C150.4°0.4°
C21C17C18H7119.2°115.5°
C21C17C18H8122.4°4.5°
C04C03C24C230.6°0.2°
C04C03C24C02179.7°179.9°
C04C03C02N015.0°155.7°
C04C03C24H3179.4°179.9°
C03C04C05H5179.6°179.7°
N14C15N16C170.6°0.3°
N14C15N16H1180.0°179.7°
C15N14C21H2179.6°180.0°
C19C18C17H7120.8°119.9°
C19C18C17H8120.8°120.0°
C19C18C17N16178.8°54.9°
C19C18H7H8117.4°120.1°
C18C19H9H10119.6°120.1°
C18C19O20H15180.0°180.0°
C18C17N16C15179.3°180.0°
C18C17C21H20.3°0.3°
C17C18H7H8117.4°120.0°
C17C18C19H9179.0°60.1°
C17C18C19H1061.3°59.9°
C17N16C15H1179.4°180.0°
N16C17C21H2180.0°179.8°
N16C17C18H760.4°65.0°
N16C17C18H858.0°174.9°
C23C24C03H3180.0°179.7°
C23C24C03C02179.7°179.7°
C24C03C02N01174.7°24.4°
C24C03C04H4179.6°180.0°
C03C24C23H11179.3°180.0°
C02C03C24H30.3°0.0°
C02C03C04H40.1°0.1°
H3C24C23H110.8°0.3°
H4C04C05H50.4°0.3°
H7C18C19H958.2°180.0°
H7C18C19H10177.9°60.0°
H8C18C19H960.2°59.9°
H8C18C19H1059.6°180.0°
H9C19O20H1559.9°60.0°
H10C19O20H1559.9°59.9°

218853

PDB entries from 2024-04-24

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