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SummaryGeometryRelated PDB entries

IGV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C27C25sing1.55Å1.63Å
C27C28sing1.55Å1.51Å
C25C26sing1.54Å1.42Å
C25O24sing1.43Å1.39Å
N22N21sing1.40Å1.34ÅAromatic
N22C23doub1.31Å1.33ÅAromatic
C26N29sing1.47Å1.50Å
C28N29sing1.47Å1.40Å
N21C20sing1.37Å1.35ÅAromatic
N29C30sing1.35Å1.45Å
C23O24sing1.36Å1.40Å
C23C17sing1.46Å1.43ÅAromatic
C30O39doub1.21Å1.19Å
C30C31sing1.51Å1.52Å
C31C32sing1.53Å1.52Å
C20C17doub1.41Å1.38ÅAromatic
C20N19sing1.33Å1.36ÅAromatic
C17C16sing1.40Å1.40ÅAromatic
N19C18doub1.31Å1.33ÅAromatic
C16C15doub1.39Å1.39ÅAromatic
C18C15sing1.40Å1.40ÅAromatic
C15C14sing1.48Å1.51Å
C14N12sing1.34Å1.32ÅAromatic
C14C13doub1.36Å1.42ÅAromatic
N12N11doub1.29Å1.33ÅAromatic
C13N10sing1.36Å1.32ÅAromatic
N11N10sing1.40Å1.33ÅAromatic
N10C09sing1.40Å1.44Å
F41C40sing1.35Å1.36Å
C09C40doub1.39Å1.36ÅAromatic
C09C07sing1.39Å1.39ÅAromatic
F08C07sing1.35Å1.37Å
C40C04sing1.39Å1.36ÅAromatic
C07C06doub1.38Å1.40ÅAromatic
C04N03sing1.40Å1.44Å
C04C05doub1.39Å1.39ÅAromatic
N03S02sing1.66Å1.68Å
C06C05sing1.38Å1.40ÅAromatic
C43C44doub1.38Å1.39ÅAromatic
C43C42sing1.38Å1.38ÅAromatic
S02O54doub1.42Å1.47Å
S02C42sing1.76Å1.80Å
S02O01doub1.42Å1.47Å
C44C45sing1.38Å1.39ÅAromatic
C42C53doub1.38Å1.38ÅAromatic
C45C46doub1.39Å1.38ÅAromatic
C53C46sing1.39Å1.37ÅAromatic
C46C47sing1.48Å1.51Å
C47C52doub1.39Å1.38ÅAromatic
C47C48sing1.39Å1.38ÅAromatic
C52C51sing1.38Å1.38ÅAromatic
C48C49doub1.38Å1.38ÅAromatic
C51C50doub1.38Å1.38ÅAromatic
C49C50sing1.38Å1.39ÅAromatic
C13H1sing1.08Å1.08Å
C16H2sing1.08Å1.08Å
C27H3sing1.09Å1.10Å
C27H4sing1.09Å1.10Å
C31H5sing1.09Å1.10Å
C31H6sing1.09Å1.10Å
C32H7sing1.09Å1.10Å
C32H8sing1.09Å1.10Å
C32H9sing1.09Å1.10Å
C26H10sing1.09Å1.10Å
C26H11sing1.09Å1.10Å
C28H12sing1.09Å1.10Å
C28H13sing1.09Å1.10Å
C05H14sing1.08Å1.08Å
C06H15sing1.08Å1.08Å
C18H16sing1.08Å1.08Å
C25H17sing1.09Å1.10Å
C43H18sing1.08Å1.08Å
C44H19sing1.08Å1.08Å
C45H20sing1.08Å1.08Å
C48H21sing1.08Å1.08Å
C49H22sing1.08Å1.08Å
C50H23sing1.08Å1.08Å
C51H24sing1.08Å1.08Å
C52H25sing1.08Å1.08Å
C53H26sing1.08Å1.08Å
N03H27sing0.97Å1.00Å
N21H28sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C25C27C2899.3°101.6°
C27C25C26102.1°102.9°
C27C25O24104.7°110.8°
C25C27H3111.9°111.0°
C25C27H4111.9°111.0°
C27C25H17111.6°110.7°
C27C28N29101.4°104.8°
C28C27H3111.9°111.1°
C28C27H4112.0°111.0°
C27C28H12111.5°110.4°
C27C28H13111.5°110.3°
C26C25O24106.7°110.7°
C25C26N29101.9°107.3°
C25C26H10111.4°109.9°
C25C26H11111.3°110.0°
C26C25H17114.9°110.7°
C25O24C23113.0°117.0°
O24C25H17115.5°110.8°
N21N22C23108.5°110.0°
N22N21C20111.0°109.3°
N22N21H28124.5°125.3°
N22C23O24129.2°126.2°
N22C23C17107.6°107.6°
C26N29C28114.5°108.7°
C26N29C30124.5°125.7°
N29C26H10111.4°109.9°
N29C26H11111.3°109.9°
C28N29C30121.0°125.7°
N29C28H12111.4°110.4°
N29C28H13111.5°110.4°
N21C20C17106.8°106.6°
N21C20N19131.7°133.2°
C20N21H28124.5°125.4°
N29C30O39119.3°120.1°
N29C30C31121.6°120.0°
O24C23C17123.2°126.2°
C23C17C20106.1°106.4°
C23C17C16134.8°134.2°
O39C30C31119.0°120.0°
C30C31C32108.8°109.5°
C30C31H5109.6°109.5°
C30C31H6109.6°109.5°
C32C31H5109.6°109.5°
C32C31H6109.6°109.5°
C31C32H7109.5°109.5°
C31C32H8109.5°109.5°
C31C32H9109.5°109.5°
C17C20N19121.4°120.2°
C20C17C16119.1°119.4°
C20N19C18121.2°121.8°
C17C16C15117.7°118.0°
C17C16H2121.2°121.0°
N19C18C15119.3°121.4°
N19C18H16120.4°119.3°
C16C15C18121.4°119.3°
C16C15C14119.2°120.4°
C15C16H2121.2°121.0°
C18C15C14119.4°120.4°
C15C18H16120.4°119.3°
C15C14N12122.9°125.7°
C15C14C13129.5°125.6°
N12C14C13107.6°108.7°
C14N12N11108.7°109.8°
C14C13N10104.9°106.7°
C14C13H1127.5°126.7°
N12N11N10108.7°108.3°
C13N10N11110.1°106.5°
C13N10C09127.6°126.8°
N10C13H1127.5°126.6°
N11N10C09122.1°126.7°
N10C09C40111.3°120.1°
N10C09C07128.8°120.0°
F41C40C09119.4°120.1°
F41C40C04119.1°120.1°
C40C09C07119.9°119.9°
C09C40C04121.5°119.9°
C09C07F08120.7°120.0°
C09C07C06118.8°120.0°
F08C07C06120.5°120.0°
C40C04N03112.7°120.0°
C40C04C05120.8°119.9°
C07C06C05120.7°120.1°
C07C06H15119.7°120.0°
N03C04C05126.4°120.0°
C04N03S02119.9°120.0°
C04N03H27106.8°120.0°
C04C05C06118.2°120.1°
C04C05H14120.9°119.9°
N03S02O54111.4°106.4°
N03S02C42112.9°107.2°
N03S02O01107.9°106.4°
S02N03H27106.8°120.0°
C06C05H14120.9°120.0°
C05C06H15119.6°119.9°
C44C43C42119.2°120.3°
C43C44C45120.6°120.1°
C44C43H18120.4°119.8°
C43C44H19119.7°120.0°
C43C42S02123.5°119.9°
C43C42C53120.4°120.1°
C42C43H18120.4°119.9°
O54S02C42110.7°106.4°
O54S02O01102.7°123.2°
C42S02O01110.7°106.4°
S02C42C53116.0°120.0°
C44C45C46118.8°119.9°
C45C44H19119.7°119.9°
C44C45H20120.6°120.1°
C42C53C46120.1°119.9°
C42C53H26119.9°120.1°
C45C46C53121.0°119.8°
C45C46C47123.8°120.1°
C46C45H20120.6°120.1°
C53C46C47115.2°120.1°
C46C53H26119.9°120.0°
C46C47C52121.2°120.1°
C46C47C48117.6°120.1°
C52C47C48121.2°119.7°
C47C52C51119.3°119.9°
C47C52H25120.4°120.1°
C47C48C49119.4°119.9°
C47C48H21120.3°120.0°
C52C51C50119.6°120.1°
C52C51H24120.2°119.9°
C51C52H25120.4°120.1°
C48C49C50119.4°120.1°
C49C48H21120.3°120.1°
C48C49H22120.3°119.9°
C51C50C49121.1°120.3°
C51C50H23119.5°119.9°
C50C51H24120.2°119.9°
C50C49H22120.3°120.0°
C49C50H23119.4°119.9°
H3C27H4109.5°110.9°
H5C31H6109.5°109.5°
H7C32H8109.5°109.4°
H7C32H9109.5°109.5°
H8C32H9109.5°109.5°
H10C26H11109.5°109.8°
H12C28H13109.5°110.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C25C27C28H3118.3°118.1°
C25C27C28H4118.3°118.0°
C27C25C26O24109.6°118.4°
C27C25C26H17120.9°118.3°
C27C25O24H17123.2°123.3°
C27C25C26N2933.3°22.2°
C25C27C28N2937.4°37.0°
C27C25O24C23103.2°91.4°
C25C27H3H4124.7°123.8°
C27C25C26H10152.1°141.6°
C27C25C26H1185.4°97.3°
C25C27C28H12156.0°81.8°
C25C27C28H1381.3°155.9°
C28C27C25C2645.8°35.5°
C28C27C25O2465.4°153.9°
C27C28N29C2619.5°24.2°
C27C28N29H12118.7°118.9°
C27C28N29H13118.7°118.8°
C27C28N29C30159.7°155.8°
C28C27H3H4124.7°123.9°
C27C28H12H13123.8°122.3°
C28C27C25H17169.0°82.8°
C26C25O24H17129.1°123.2°
C25C26N29H10118.8°119.4°
C25C26N29H11118.7°119.6°
C25C26N29C2810.6°1.1°
C25C26N29C30170.3°178.9°
C26C25O24C23149.1°155.0°
C26C25C27H372.5°82.6°
C26C25C27H4164.1°153.6°
C25C26H10H11123.5°121.2°
C25O24C23N2211.5°0.1°
O24C25C26N2976.3°140.6°
C25O24C23C17168.6°180.0°
O24C25C27H3176.3°35.7°
O24C25C27H453.0°88.1°
O24C25C26H1042.5°100.0°
O24C25C26H11164.9°21.1°
N22N21C20H28180.0°180.0°
N21N22C23O24180.0°180.0°
N21N22C23C170.1°0.0°
N22N21C20C170.1°0.0°
N22N21C20N19179.8°179.6°
C23N22N21C200.0°0.0°
N22C23O24C17179.9°180.0°
N22C23C17C200.1°0.0°
N22C23C17C16180.0°180.0°
C23N22N21H28180.0°180.0°
C26N29C28C30179.2°180.0°
C26N29C30O39179.5°0.0°
C26N29C30C310.2°180.0°
N29C26H10H11123.6°121.0°
C26N29C28H12138.2°94.7°
C26N29C28H1399.2°143.0°
N29C26C25H17154.3°96.2°
C28N29C30O390.4°180.0°
C28N29C30C31179.3°0.0°
N29C28C27H381.0°81.1°
N29C28C27H4155.7°155.1°
C28N29C26H10129.4°118.4°
C28N29C26H11108.2°120.7°
N29C28H12H13123.7°122.3°
N21C20C17C230.1°0.0°
N21C20C17N19179.9°179.7°
N21C20C17C16180.0°180.0°
N21C20N19C18179.9°180.0°
N29C30O39C31179.7°180.0°
N29C30C31C32165.5°180.0°
N29C30C31H545.6°60.0°
N29C30C31H674.6°60.0°
C30N29C26H1051.5°61.7°
C30N29C26H1171.0°59.3°
C30N29C28H1241.0°85.3°
C30N29C28H1381.6°37.0°
O24C23C17C20179.9°180.0°
O24C23C17C160.1°0.0°
C23O24C25H1719.9°31.8°
C23C17C20C16179.9°180.0°
C23C17C20N19179.8°179.7°
C23C17C16C15179.7°180.0°
C23C17C16H20.3°0.0°
O39C30C31C3214.8°0.0°
O39C30C31H5134.7°120.0°
O39C30C31H6105.1°120.0°
C30C31C32H5119.9°120.0°
C30C31C32H6119.9°120.0°
C30C31H5H6120.3°120.0°
C30C31C32H7180.0°60.0°
C30C31C32H860.0°180.0°
C30C31C32H960.0°60.0°
C32C31H5H6120.3°120.0°
C31C32H7H8120.0°120.0°
C31C32H7H9120.0°120.0°
C31C32H8H9120.0°120.0°
C17C20N19C180.0°0.4°
C20C17C16C150.2°0.0°
C20C17C16H2179.8°180.0°
C17C20N21H28179.9°180.0°
N19C20C17C160.1°0.3°
C20N19C18C150.0°0.1°
C20N19C18H16180.0°180.0°
N19C20N21H280.2°0.3°
C17C16C15H2180.0°180.0°
C17C16C15C180.2°0.3°
C17C16C15C14179.7°180.0°
N19C18C15C160.1°0.2°
N19C18C15H16180.0°179.9°
N19C18C15C14179.8°180.0°
C16C15C18C14179.9°179.8°
C16C15C14N1220.1°0.0°
C16C15C14C13158.9°180.0°
C16C15C18H16179.9°179.7°
C18C15C14N12159.9°179.8°
C18C15C14C1321.0°0.2°
C18C15C16H2179.8°179.7°
C15C14N12C13179.2°179.9°
C15C14N12N11179.4°180.0°
C15C14C13N10178.1°180.0°
C15C14C13H11.9°0.3°
C14C15C16H20.3°0.0°
C14C15C18H160.2°0.1°
N12C14C13N101.0°0.0°
C14N12N11N101.4°0.0°
N12C14C13H1179.0°179.7°
C13C14N12N110.2°0.0°
C14C13N10H1180.0°179.7°
C14C13N10N111.9°0.0°
C14C13N10C09177.1°179.7°
N12N11N10C132.1°0.0°
N12N11N10C09177.7°179.7°
C13N10N11C09175.6°179.8°
C13N10C09C40101.9°180.0°
C13N10C09C0779.7°0.5°
N11N10C09C4072.8°0.3°
N11N10C09C07105.6°179.2°
N11N10C13H1178.1°179.7°
N10C09C40F411.1°0.6°
N10C09C40C07178.6°179.4°
N10C09C07F081.2°0.3°
N10C09C40C04179.5°180.0°
N10C09C07C06179.3°179.8°
C09N10C13H12.9°0.0°
F41C40C09C04179.5°179.4°
F41C40C09C07179.6°180.0°
F41C40C04N030.5°0.4°
F41C40C04C05179.7°180.0°
C40C09C07F08179.5°179.8°
C40C09C07C061.0°0.3°
C09C40C04N03178.9°179.8°
C09C40C04C050.3°0.6°
C09C07F08C06179.5°179.9°
C07C09C40C040.9°0.6°
C09C07C06C050.5°0.1°
C09C07C06H15179.5°180.0°
F08C07C06C05180.0°180.0°
F08C07C06H150.0°0.1°
C40C04N03C05179.1°179.7°
C40C04N03S02173.7°144.8°
C40C04C05C060.2°0.3°
C40C04C05H14179.8°179.8°
C40C04N03H2752.2°35.2°
C07C06C05C040.1°0.0°
C07C06C05H15180.0°180.0°
C07C06C05H14179.9°180.0°
C04N03S02H27121.5°180.0°
N03C04C05C06179.3°180.0°
C04N03S02O54164.7°173.9°
C04N03S02C4270.0°60.4°
C04N03S02O0152.7°53.2°
N03C04C05H140.7°0.1°
C05C04N03S027.2°35.6°
C04C05C06H14180.0°180.0°
C04C05C06H15179.9°180.0°
C05C04N03H27128.6°144.5°
N03S02C42C4344.0°89.8°
N03S02O54C42126.6°114.1°
N03S02O54O01115.2°123.0°
N03S02C42O01121.1°113.5°
N03S02C42C53136.6°90.0°
C44C43C42H18180.0°180.0°
C44C43C42S02179.7°179.7°
C43C44C45H19180.0°180.0°
C44C43C42C530.3°0.0°
C43C44C45C460.2°0.0°
C43C44C45H20179.8°180.0°
C43C42S02O5481.7°156.7°
C43C42S02C53179.4°179.8°
C43C42S02O01165.1°23.8°
C42C43C44C450.1°0.0°
C43C42C53C460.3°0.1°
C42C43C44H19179.9°180.0°
C43C42C53H26179.8°180.0°
O54S02C42O01113.2°132.9°
O54S02C42C5397.7°23.5°
O54S02N03H2743.2°6.1°
S02C42C53C46179.7°179.7°
S02C42C43H180.3°0.3°
S02C42C53H260.4°0.2°
C42S02N03H27168.6°119.6°
O01S02C42C5315.6°156.4°
O01S02N03H2768.7°126.9°
C44C45C46H20180.0°180.0°
C44C45C46C530.3°0.1°
C44C45C46C47179.5°180.0°
C45C44C43H18179.9°180.0°
C42C53C46C450.0°0.1°
C42C53C46H26180.0°179.9°
C42C53C46C47179.4°180.0°
C53C42C43H18179.7°179.9°
C45C46C53C47179.3°179.9°
C45C46C47C5221.9°0.1°
C45C46C47C48159.2°179.7°
C46C45C44H19179.8°180.0°
C45C46C53H26179.9°180.0°
C53C46C47C52157.4°180.0°
C53C46C47C4821.5°0.2°
C53C46C45H20179.7°180.0°
C46C47C52C48178.8°179.8°
C46C47C52C51179.4°179.7°
C46C47C48C49179.4°180.0°
C47C46C45H200.4°0.1°
C46C47C48H210.6°0.1°
C46C47C52H250.6°0.0°
C47C46C53H260.6°0.1°
C47C52C51H25180.0°179.7°
C52C47C48C490.5°0.2°
C47C52C51C500.5°0.5°
C52C47C48H21179.5°179.7°
C47C52C51H24179.5°179.7°
C48C47C52C510.6°0.5°
C47C48C49H21180.0°179.9°
C47C48C49C500.4°0.1°
C47C48C49H22179.6°180.0°
C48C47C52H25179.4°179.8°
C52C51C50H24180.0°179.8°
C52C51C50C490.4°0.2°
C52C51C50H23179.6°179.7°
C48C49C50C510.3°0.1°
C48C49C50H22180.0°179.9°
C48C49C50H23179.7°180.0°
C51C50C49H23180.0°179.9°
C51C50C49H22179.7°180.0°
C50C51C52H25179.5°179.7°
C50C49C48H21179.6°180.0°
C49C50C51H24179.6°180.0°
H3C27C28H1237.7°160.1°
H3C27C28H13160.3°37.7°
H3C27C25H1750.7°159.0°
H4C27C28H1285.7°36.2°
H4C27C28H1337.0°86.1°
H4C27C25H1772.7°35.3°
H5C31C32H760.1°60.0°
H5C31C32H8179.9°60.0°
H5C31C32H959.9°180.0°
H6C31C32H760.1°NaN°
H6C31C32H859.9°60.0°
H6C31C32H9179.9°60.0°
H7C32H8H9120.0°120.0°
H10C26C25H1786.9°23.3°
H11C26C25H1735.5°144.3°
H14C05C06H150.1°0.1°
H18C43C44H190.1°0.0°
H19C44C45H200.2°0.0°
H21C48C49H220.4°0.1°
H22C49C50H230.3°0.1°
H23C50C51H240.4°0.1°
H24C51C52H250.5°0.0°

224931

PDB entries from 2024-09-11

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