HL5
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O | C | doub | 1.21Å | 1.26Å | |
| CD2 | CG | sing | 1.53Å | 1.53Å | |
| C | OXT | sing | 1.34Å | 1.26Å | |
| C | CA | sing | 1.51Å | 1.52Å | |
| N | CA | sing | 1.47Å | 1.46Å | |
| CB | CA | sing | 1.53Å | 1.52Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CG | CD1 | sing | 1.53Å | 1.54Å | |
| CD1 | OD | sing | 1.43Å | 1.42Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å | |
| CB | HB2 | sing | 1.09Å | 1.10Å | |
| CB | HB3 | sing | 1.09Å | 1.10Å | |
| CG | HG1 | sing | 1.09Å | 1.10Å | |
| OD | HD1 | sing | 0.97Å | 0.95Å | |
| CD1 | HD12 | sing | 1.09Å | 1.10Å | |
| CD1 | HD13 | sing | 1.09Å | 1.10Å | |
| CD2 | HD23 | sing | 1.09Å | 1.10Å | |
| CD2 | HD22 | sing | 1.09Å | 1.10Å | |
| CD2 | HD21 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | OXT | 120.9° | 120.0° |
| O | C | CA | 120.0° | 120.0° |
| CD2 | CG | CB | 107.5° | 109.5° |
| CD2 | CG | CD1 | 112.0° | 109.5° |
| CD2 | CG | HG1 | 109.3° | 109.4° |
| CG | CD2 | HD23 | 109.5° | 109.5° |
| CG | CD2 | HD22 | 109.5° | 109.5° |
| CG | CD2 | HD21 | 109.5° | 109.5° |
| OXT | C | CA | 119.0° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| C | CA | N | 110.0° | 109.5° |
| C | CA | CB | 108.5° | 109.5° |
| C | CA | HA | 108.4° | 109.5° |
| N | CA | CB | 112.1° | 109.5° |
| CA | N | H2 | 109.5° | 111.0° |
| CA | N | H | 109.4° | 111.0° |
| N | CA | HA | 109.3° | 109.4° |
| CA | CB | CG | 112.8° | 109.5° |
| CB | CA | HA | 108.5° | 109.5° |
| CA | CB | HB2 | 108.7° | 109.5° |
| CA | CB | HB3 | 108.6° | 109.5° |
| CB | CG | CD1 | 109.7° | 109.5° |
| CG | CB | HB2 | 108.6° | 109.5° |
| CG | CB | HB3 | 108.6° | 109.5° |
| CB | CG | HG1 | 109.2° | 109.5° |
| CG | CD1 | OD | 110.0° | 109.5° |
| CD1 | CG | HG1 | 109.1° | 109.5° |
| CG | CD1 | HD12 | 109.3° | 109.5° |
| CG | CD1 | HD13 | 109.3° | 109.5° |
| CD1 | OD | HD1 | 109.5° | 114.1° |
| OD | CD1 | HD12 | 109.3° | 109.4° |
| OD | CD1 | HD13 | 109.4° | 109.4° |
| H2 | N | H | 109.5° | 111.0° |
| HB2 | CB | HB3 | 109.5° | 109.4° |
| HD12 | CD1 | HD13 | 109.5° | 109.5° |
| HD23 | CD2 | HD22 | 109.5° | 109.5° |
| HD23 | CD2 | HD21 | 109.4° | 109.4° |
| HD22 | CD2 | HD21 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | OXT | CA | 178.9° | 180.0° |
| O | C | CA | N | 10.4° | 20.0° |
| O | C | CA | CB | 112.6° | 100.0° |
| O | C | CA | HA | 129.8° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| CD2 | CG | CB | CA | 166.8° | 174.1° |
| CD2 | CG | CB | CD1 | 122.0° | 120.0° |
| CD2 | CG | CB | HG1 | 118.5° | 119.9° |
| CD2 | CG | CD1 | HG1 | 121.1° | 120.0° |
| CD2 | CG | CD1 | OD | 66.5° | 65.0° |
| CD2 | CG | CB | HB2 | 46.3° | 54.0° |
| CD2 | CG | CB | HB3 | 72.7° | 65.9° |
| CD2 | CG | CD1 | HD12 | 53.6° | 55.0° |
| CD2 | CG | CD1 | HD13 | 173.4° | 175.0° |
| CG | CD2 | HD23 | HD22 | 120.0° | 120.1° |
| CG | CD2 | HD23 | HD21 | 120.0° | 120.0° |
| CG | CD2 | HD22 | HD21 | 120.0° | 120.0° |
| OXT | C | CA | N | 170.8° | 160.0° |
| OXT | C | CA | CB | 66.3° | 80.0° |
| OXT | C | CA | HA | 51.3° | 40.0° |
| C | CA | N | CB | 120.8° | 120.0° |
| C | CA | N | HA | 118.9° | 120.0° |
| C | CA | CB | HA | 117.6° | 120.0° |
| C | CA | CB | CG | 173.9° | 174.8° |
| C | CA | N | H2 | 180.0° | 65.8° |
| C | CA | N | H | 60.0° | 170.2° |
| CA | C | OXT | HXT | 178.9° | 180.0° |
| C | CA | CB | HB2 | 53.4° | 65.1° |
| C | CA | CB | HB3 | 65.6° | 54.8° |
| N | CA | CB | HA | 120.8° | 120.0° |
| N | CA | CB | CG | 52.2° | 65.1° |
| CA | N | H2 | H | 120.0° | 124.0° |
| N | CA | CB | HB2 | 68.2° | 54.9° |
| N | CA | CB | HB3 | 172.7° | 174.9° |
| CA | CB | CG | HB2 | 120.5° | 120.0° |
| CA | CB | CG | HB3 | 120.5° | 120.0° |
| CA | CB | CG | CD1 | 71.2° | 65.9° |
| CB | CA | N | H2 | 59.2° | 54.3° |
| CB | CA | N | H | 179.2° | 69.7° |
| CA | CB | HB2 | HB3 | 118.5° | 120.0° |
| CA | CB | CG | HG1 | 48.3° | 54.2° |
| CB | CG | CD1 | HG1 | 119.6° | 120.0° |
| CB | CG | CD1 | OD | 174.3° | 175.0° |
| CG | CB | CA | HA | 68.6° | 54.8° |
| CG | CB | HB2 | HB3 | 118.5° | 120.0° |
| CB | CG | CD1 | HD12 | 65.6° | 65.0° |
| CB | CG | CD1 | HD13 | 54.2° | 55.0° |
| CB | CG | CD2 | HD23 | 180.0° | 176.0° |
| CB | CG | CD2 | HD22 | 60.0° | 56.0° |
| CB | CG | CD2 | HD21 | 60.0° | 64.0° |
| CG | CD1 | OD | HD12 | 120.1° | 120.0° |
| CG | CD1 | OD | HD13 | 120.1° | 120.0° |
| CD1 | CG | CB | HB2 | 168.3° | 174.0° |
| CD1 | CG | CB | HB3 | 49.3° | 54.1° |
| CG | CD1 | OD | HD1 | 180.0° | 179.9° |
| CG | CD1 | HD12 | HD13 | 119.7° | 120.0° |
| CD1 | CG | CD2 | HD23 | 59.4° | 64.0° |
| CD1 | CG | CD2 | HD22 | 179.4° | 176.0° |
| CD1 | CG | CD2 | HD21 | 60.5° | 56.0° |
| OD | CD1 | CG | HG1 | 54.6° | 55.0° |
| OD | CD1 | HD12 | HD13 | 119.8° | 120.0° |
| H2 | N | CA | HA | 61.1° | 174.3° |
| H | N | CA | HA | 58.9° | 50.3° |
| HA | CA | CB | HB2 | 171.0° | 174.9° |
| HA | CA | CB | HB3 | 51.9° | 65.2° |
| HB2 | CB | CG | HG1 | 72.2° | 65.9° |
| HB3 | CB | CG | HG1 | 168.8° | 174.2° |
| HG1 | CG | CD1 | HD12 | 174.7° | 174.9° |
| HG1 | CG | CD1 | HD13 | 65.5° | 65.0° |
| HG1 | CG | CD2 | HD23 | 61.6° | 56.1° |
| HG1 | CG | CD2 | HD22 | 58.4° | 64.0° |
| HG1 | CG | CD2 | HD21 | 178.4° | 176.0° |
| HD1 | OD | CD1 | HD12 | 59.9° | 60.1° |
| HD1 | OD | CD1 | HD13 | 59.9° | 60.0° |
| HD23 | CD2 | HD22 | HD21 | 120.0° | 119.9° |
