GGH
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C2 | N2 | sing | 1.37Å | 1.35Å | |
| C2 | N1 | sing | 1.41Å | 1.38Å | |
| C2 | N3 | doub | 1.32Å | 1.32Å | |
| C4 | N3 | sing | 1.35Å | 1.35Å | |
| C4 | C5 | doub | 1.37Å | 1.38Å | Aromatic |
| C4 | N9 | sing | 1.37Å | 1.38Å | Aromatic |
| C5 | C6 | sing | 1.44Å | 1.41Å | |
| C5 | N7 | sing | 1.36Å | 1.39Å | Aromatic |
| C6 | N1 | sing | 1.40Å | 1.39Å | |
| C6 | O6 | doub | 1.22Å | 1.24Å | |
| P1 | O5' | sing | 1.62Å | 1.60Å | |
| P1 | O3A | sing | 1.62Å | 1.51Å | |
| P1 | O2A | doub | 1.50Å | 1.49Å | |
| P1 | O1A | sing | 1.62Å | 1.49Å | |
| P2 | O1B | doub | 1.50Å | 1.48Å | |
| P2 | O3A | sing | 1.61Å | 1.50Å | |
| P2 | O2B | sing | 1.62Å | 1.49Å | |
| P2 | C3B | sing | 1.81Å | 1.87Å | |
| O1A | HO1A | sing | 0.98Å | 0.95Å | |
| O5' | C5' | sing | 1.42Å | 1.43Å | |
| O2B | HO2B | sing | 0.98Å | 0.95Å | |
| C3B | P3 | sing | 1.81Å | 1.87Å | |
| C3B | H3B1 | sing | 1.10Å | 1.10Å | |
| C3B | H3B2 | sing | 1.10Å | 1.10Å | |
| P3 | O3G | doub | 1.50Å | 1.49Å | |
| P3 | O1G | sing | 1.61Å | 1.49Å | |
| P3 | O2G | sing | 1.62Å | 1.49Å | |
| O1G | HO1G | sing | 0.98Å | 0.95Å | |
| O2G | HO2G | sing | 0.98Å | 0.95Å | |
| C5' | C4' | sing | 1.52Å | 1.51Å | |
| C5' | H5'1 | sing | 1.09Å | 1.10Å | |
| C5' | H5'2 | sing | 1.09Å | 1.10Å | |
| C4' | C3' | sing | 1.52Å | 1.52Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | H4' | sing | 1.10Å | 1.10Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C1' | C2' | sing | 1.52Å | 1.53Å | |
| C1' | N9 | sing | 1.46Å | 1.46Å | |
| C1' | H1' | sing | 1.10Å | 1.10Å | |
| N9 | C8 | sing | 1.38Å | 1.38Å | Aromatic |
| N2 | HN21 | sing | 0.99Å | 1.00Å | |
| N2 | HN22 | sing | 0.99Å | 1.00Å | |
| N1 | HN1 | sing | 1.02Å | 1.00Å | |
| N7 | C8 | doub | 1.32Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C2' | C3' | sing | 1.51Å | 1.52Å | |
| C2' | H2'1 | sing | 1.10Å | 1.10Å | |
| C2' | H2'2 | sing | 1.09Å | 1.10Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N2 | C2 | N1 | 116.5° | 115.4° |
| N2 | C2 | N3 | 119.7° | 122.0° |
| C2 | N2 | HN21 | 109.1° | 118.3° |
| C2 | N2 | HN22 | 125.4° | 118.3° |
| N1 | C2 | N3 | 123.8° | 122.6° |
| C2 | N1 | C6 | 125.0° | 125.3° |
| C2 | N1 | HN1 | 117.5° | 117.4° |
| C2 | N3 | C4 | 112.0° | 113.0° |
| N3 | C4 | C5 | 128.6° | 129.1° |
| N3 | C4 | N9 | 125.9° | 126.0° |
| C5 | C4 | N9 | 105.4° | 104.9° |
| C4 | C5 | C6 | 119.0° | 119.2° |
| C4 | C5 | N7 | 110.8° | 112.1° |
| C4 | N9 | C1' | 126.5° | 127.3° |
| C4 | N9 | C8 | 106.2° | 106.6° |
| C6 | C5 | N7 | 130.2° | 128.7° |
| C5 | C6 | N1 | 111.6° | 110.8° |
| C5 | C6 | O6 | 128.4° | 123.8° |
| C5 | N7 | C8 | 104.4° | 103.9° |
| N1 | C6 | O6 | 120.0° | 125.4° |
| C6 | N1 | HN1 | 117.5° | 117.4° |
| O5' | P1 | O3A | 106.1° | 104.3° |
| O5' | P1 | O2A | 107.4° | 114.7° |
| O5' | P1 | O1A | 106.3° | 104.4° |
| P1 | O5' | C5' | 120.9° | 119.9° |
| O3A | P1 | O2A | 107.5° | 114.3° |
| O3A | P1 | O1A | 109.8° | 103.4° |
| P1 | O3A | P2 | 130.0° | 131.5° |
| O2A | P1 | O1A | 119.0° | 114.5° |
| P1 | O1A | HO1A | 109.5° | 118.9° |
| O1B | P2 | O3A | 106.6° | 115.5° |
| O1B | P2 | O2B | 119.2° | 115.2° |
| O1B | P2 | C3B | 99.9° | 114.6° |
| O3A | P2 | O2B | 112.5° | 103.6° |
| O3A | P2 | C3B | 107.0° | 102.9° |
| O2B | P2 | C3B | 110.4° | 103.4° |
| P2 | O2B | HO2B | 109.5° | 119.0° |
| P2 | C3B | P3 | 112.1° | 124.1° |
| P2 | C3B | H3B1 | 108.6° | 106.4° |
| P2 | C3B | H3B2 | 108.0° | 106.0° |
| O5' | C5' | C4' | 110.9° | 109.0° |
| O5' | C5' | H5'1 | 109.0° | 108.8° |
| O5' | C5' | H5'2 | 108.7° | 108.8° |
| P3 | C3B | H3B1 | 108.6° | 106.8° |
| P3 | C3B | H3B2 | 108.0° | 105.9° |
| C3B | P3 | O3G | 105.5° | 114.3° |
| C3B | P3 | O1G | 106.9° | 103.3° |
| C3B | P3 | O2G | 106.6° | 103.3° |
| H3B1 | C3B | H3B2 | 111.6° | 106.4° |
| O3G | P3 | O1G | 109.1° | 115.4° |
| O3G | P3 | O2G | 108.6° | 115.4° |
| O1G | P3 | O2G | 119.3° | 103.6° |
| P3 | O1G | HO1G | 109.5° | 119.0° |
| P3 | O2G | HO2G | 109.5° | 119.0° |
| C4' | C5' | H5'1 | 109.0° | 110.5° |
| C4' | C5' | H5'2 | 108.7° | 110.5° |
| C5' | C4' | C3' | 115.2° | 112.7° |
| C5' | C4' | O4' | 111.4° | 108.0° |
| C5' | C4' | H4' | 102.5° | 109.4° |
| H5'1 | C5' | H5'2 | 110.6° | 109.1° |
| C3' | C4' | O4' | 104.0° | 106.8° |
| C3' | C4' | H4' | 110.1° | 112.0° |
| C4' | C3' | C2' | 101.3° | 103.2° |
| C4' | C3' | O3' | 110.4° | 109.6° |
| C4' | C3' | H3' | 114.9° | 114.0° |
| O4' | C4' | H4' | 114.0° | 107.7° |
| C4' | O4' | C1' | 109.2° | 108.7° |
| O4' | C1' | C2' | 106.6° | 106.7° |
| O4' | C1' | N9 | 108.3° | 110.0° |
| O4' | C1' | H1' | 113.1° | 108.1° |
| C2' | C1' | N9 | 112.5° | 114.3° |
| C2' | C1' | H1' | 109.0° | 111.7° |
| C1' | C2' | C3' | 102.6° | 101.6° |
| C1' | C2' | H2'1 | 111.8° | 110.5° |
| C1' | C2' | H2'2 | 113.3° | 111.7° |
| N9 | C1' | H1' | 107.3° | 105.9° |
| C1' | N9 | C8 | 127.3° | 126.1° |
| N9 | C8 | N7 | 113.2° | 112.5° |
| N9 | C8 | H8 | 123.4° | 122.0° |
| HN21 | N2 | HN22 | 125.5° | 123.4° |
| N7 | C8 | H8 | 123.4° | 125.5° |
| C3' | C2' | H2'1 | 111.8° | 110.0° |
| C3' | C2' | H2'2 | 113.3° | 114.2° |
| C2' | C3' | O3' | 111.9° | 108.4° |
| C2' | C3' | H3' | 113.5° | 113.7° |
| H2'1 | C2' | H2'2 | 104.3° | 108.7° |
| O3' | C3' | H3' | 105.0° | 107.8° |
| C3' | O3' | HO3' | 109.5° | 106.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N2 | C2 | N1 | N3 | 179.2° | 180.0° |
| N2 | C2 | N3 | C4 | 177.2° | 180.0° |
| N2 | C2 | N1 | C6 | 177.6° | 180.0° |
| C2 | N2 | HN21 | HN22 | 180.0° | 179.9° |
| N2 | C2 | N1 | HN1 | 2.4° | 0.0° |
| N1 | C2 | N3 | C4 | 1.9° | 0.0° |
| C2 | N1 | C6 | C5 | 0.3° | 0.0° |
| C2 | N1 | C6 | HN1 | 180.0° | 180.0° |
| C2 | N1 | C6 | O6 | 178.9° | 180.0° |
| N1 | C2 | N2 | HN21 | 0.0° | 46.4° |
| N1 | C2 | N2 | HN22 | 180.0° | 133.7° |
| C2 | N3 | C4 | C5 | 0.6° | 0.0° |
| C2 | N3 | C4 | N9 | 179.1° | 180.0° |
| N3 | C2 | N1 | C6 | 1.6° | 0.0° |
| N3 | C2 | N2 | HN21 | 179.2° | 133.6° |
| N3 | C2 | N2 | HN22 | 0.8° | 46.4° |
| N3 | C2 | N1 | HN1 | 178.4° | 180.0° |
| N3 | C4 | C5 | N9 | 178.7° | 180.0° |
| N3 | C4 | C5 | C6 | 1.3° | 0.0° |
| N3 | C4 | C5 | N7 | 179.1° | 180.0° |
| N3 | C4 | N9 | C1' | 3.1° | 0.0° |
| N3 | C4 | N9 | C8 | 179.0° | 180.0° |
| C4 | C5 | C6 | N7 | 179.5° | 179.9° |
| C4 | C5 | C6 | N1 | 1.6° | 0.1° |
| C4 | C5 | C6 | O6 | 177.6° | 180.0° |
| C5 | C4 | N9 | C1' | 175.7° | 180.0° |
| C5 | C4 | N9 | C8 | 2.2° | 0.0° |
| C4 | C5 | N7 | C8 | 1.1° | 0.0° |
| N9 | C4 | C5 | C6 | 177.5° | 180.0° |
| N9 | C4 | C5 | N7 | 2.1° | 0.0° |
| C4 | N9 | C1' | O4' | 148.6° | 146.5° |
| C4 | N9 | C1' | C2' | 93.7° | 93.4° |
| C4 | N9 | C1' | C8 | 177.5° | 180.0° |
| C4 | N9 | C1' | H1' | 26.1° | 30.0° |
| C4 | N9 | C8 | N7 | 1.7° | 0.0° |
| C4 | N9 | C8 | H8 | 178.3° | 180.0° |
| C5 | C6 | N1 | O6 | 179.3° | 179.9° |
| C5 | C6 | N1 | HN1 | 179.7° | 180.0° |
| C6 | C5 | N7 | C8 | 178.4° | 180.0° |
| N7 | C5 | C6 | N1 | 178.9° | 180.0° |
| N7 | C5 | C6 | O6 | 1.9° | 0.1° |
| C5 | N7 | C8 | N9 | 0.4° | 0.0° |
| C5 | N7 | C8 | H8 | 179.6° | 180.0° |
| O6 | C6 | N1 | HN1 | 1.1° | 0.1° |
| O5' | P1 | O3A | O2A | 114.6° | 126.0° |
| O5' | P1 | O3A | O1A | 114.5° | 108.9° |
| O5' | P1 | O2A | O1A | 120.6° | 120.7° |
| O5' | P1 | O3A | P2 | 107.3° | 174.0° |
| O5' | P1 | O1A | HO1A | 126.9° | 79.7° |
| P1 | O5' | C5' | C4' | 125.9° | 180.0° |
| P1 | O5' | C5' | H5'1 | 114.1° | 59.4° |
| P1 | O5' | C5' | H5'2 | 6.5° | 59.4° |
| O3A | P1 | O2A | O1A | 125.6° | 119.0° |
| P1 | O3A | P2 | O1B | 148.8° | 54.4° |
| P1 | O3A | P2 | O2B | 16.4° | 72.5° |
| P1 | O3A | P2 | C3B | 105.0° | 180.0° |
| O3A | P1 | O1A | HO1A | 118.7° | 171.5° |
| O3A | P1 | O5' | C5' | 62.3° | 54.2° |
| O2A | P1 | O3A | P2 | 138.0° | 60.0° |
| O2A | P1 | O1A | HO1A | 5.7° | 46.5° |
| O2A | P1 | O5' | C5' | 177.1° | 180.0° |
| O1A | P1 | O3A | P2 | 7.2° | 65.1° |
| O1A | P1 | O5' | C5' | 54.6° | 54.0° |
| O1B | P2 | O3A | O2B | 132.4° | 126.9° |
| O1B | P2 | O3A | C3B | 106.2° | 125.6° |
| O1B | P2 | O2B | C3B | 114.8° | 125.8° |
| O1B | P2 | O2B | HO2B | 166.8° | 52.4° |
| O1B | P2 | C3B | P3 | 150.8° | 55.7° |
| O1B | P2 | C3B | H3B1 | 30.8° | 180.0° |
| O1B | P2 | C3B | H3B2 | 90.3° | 66.9° |
| O3A | P2 | O2B | C3B | 119.5° | 107.1° |
| O3A | P2 | O2B | HO2B | 67.5° | 74.7° |
| O3A | P2 | C3B | P3 | 98.3° | 70.5° |
| O3A | P2 | C3B | H3B1 | 141.7° | 53.8° |
| O3A | P2 | C3B | H3B2 | 20.5° | 166.9° |
| O2B | P2 | C3B | P3 | 24.4° | 178.1° |
| O2B | P2 | C3B | H3B1 | 95.6° | 53.8° |
| O2B | P2 | C3B | H3B2 | 143.3° | 59.2° |
| C3B | P2 | O2B | HO2B | 52.0° | 178.2° |
| P2 | C3B | P3 | H3B1 | 120.0° | 124.1° |
| P2 | C3B | P3 | H3B2 | 118.9° | 122.7° |
| P2 | C3B | H3B1 | H3B2 | 119.0° | 112.8° |
| P2 | C3B | P3 | O3G | 91.5° | 175.9° |
| P2 | C3B | P3 | O1G | 24.5° | 49.8° |
| P2 | C3B | P3 | O2G | 153.1° | 57.9° |
| O5' | C5' | C4' | H5'1 | 120.0° | 119.5° |
| O5' | C5' | C4' | H5'2 | 119.4° | 119.5° |
| O5' | C5' | H5'1 | H5'2 | 119.4° | 118.6° |
| O5' | C5' | C4' | C3' | 62.6° | 179.6° |
| O5' | C5' | C4' | O4' | 55.6° | 61.8° |
| O5' | C5' | C4' | H4' | 177.8° | 55.2° |
| P3 | C3B | H3B1 | H3B2 | 118.9° | 112.8° |
| C3B | P3 | O3G | O1G | 114.6° | 119.5° |
| C3B | P3 | O3G | O2G | 113.9° | 119.6° |
| C3B | P3 | O1G | O2G | 120.8° | 107.5° |
| C3B | P3 | O1G | HO1G | 163.9° | 177.8° |
| C3B | P3 | O2G | HO2G | 3.0° | 177.8° |
| H3B1 | C3B | P3 | O3G | 28.5° | 60.0° |
| H3B1 | C3B | P3 | O1G | 144.5° | 173.9° |
| H3B1 | C3B | P3 | O2G | 86.9° | 66.2° |
| H3B2 | C3B | P3 | O3G | 149.6° | 53.2° |
| H3B2 | C3B | P3 | O1G | 94.4° | 72.9° |
| H3B2 | C3B | P3 | O2G | 34.2° | 179.4° |
| O3G | P3 | O1G | O2G | 125.5° | 127.1° |
| O3G | P3 | O1G | HO1G | 82.4° | 52.4° |
| O3G | P3 | O2G | HO2G | 116.3° | 52.3° |
| O1G | P3 | O2G | HO2G | 118.0° | 74.8° |
| O2G | P3 | O1G | HO1G | 43.2° | 74.7° |
| C4' | C5' | H5'1 | H5'2 | 119.4° | 121.7° |
| C5' | C4' | C3' | O4' | 122.2° | 118.5° |
| C5' | C4' | C3' | H4' | 115.2° | 123.8° |
| C5' | C4' | O4' | H4' | 115.4° | 118.0° |
| C5' | C4' | O4' | C1' | 152.6° | 116.0° |
| C5' | C4' | C3' | C2' | 161.9° | 92.6° |
| C5' | C4' | C3' | O3' | 79.4° | 152.1° |
| C5' | C4' | C3' | H3' | 39.1° | 31.2° |
| H5'1 | C5' | C4' | C3' | 177.4° | 60.0° |
| H5'1 | C5' | C4' | O4' | 64.4° | 57.7° |
| H5'1 | C5' | C4' | H4' | 57.9° | 174.7° |
| H5'2 | C5' | C4' | C3' | 56.8° | 60.9° |
| H5'2 | C5' | C4' | O4' | 175.0° | 178.7° |
| H5'2 | C5' | C4' | H4' | 62.8° | 64.3° |
| C3' | C4' | O4' | H4' | 119.9° | 120.5° |
| C3' | C4' | O4' | C1' | 27.8° | 5.5° |
| C4' | C3' | C2' | C1' | 36.1° | 34.8° |
| C4' | C3' | C2' | O3' | 117.6° | 116.2° |
| C4' | C3' | C2' | H3' | 123.8° | 123.9° |
| C4' | C3' | C2' | H2'1 | 83.9° | 82.2° |
| C4' | C3' | C2' | H2'2 | 158.6° | 155.2° |
| C4' | C3' | O3' | H3' | 124.4° | 124.6° |
| C4' | C3' | O3' | HO3' | 106.6° | 91.0° |
| C4' | O4' | C1' | C2' | 4.4° | 17.3° |
| C4' | O4' | C1' | N9 | 125.8° | 141.8° |
| C4' | O4' | C1' | H1' | 115.4° | 103.1° |
| O4' | C4' | C3' | C2' | 39.7° | 25.9° |
| O4' | C4' | C3' | O3' | 158.4° | 89.4° |
| O4' | C4' | C3' | H3' | 83.2° | 149.7° |
| H4' | C4' | O4' | C1' | 92.1° | 126.0° |
| H4' | C4' | C3' | C2' | 82.8° | 143.6° |
| H4' | C4' | C3' | O3' | 35.8° | 28.3° |
| H4' | C4' | C3' | H3' | 154.3° | 92.6° |
| O4' | C1' | C2' | N9 | 118.6° | 121.8° |
| O4' | C1' | C2' | H1' | 122.5° | 117.9° |
| O4' | C1' | N9 | H1' | 122.5° | 116.5° |
| O4' | C1' | N9 | C8 | 33.9° | 33.5° |
| O4' | C1' | C2' | C3' | 20.6° | 32.7° |
| O4' | C1' | C2' | H2'1 | 99.4° | 84.0° |
| O4' | C1' | C2' | H2'2 | 143.1° | 154.9° |
| C2' | C1' | N9 | H1' | 119.9° | 123.5° |
| C2' | C1' | N9 | C8 | 83.8° | 86.6° |
| C1' | C2' | C3' | H2'1 | 120.0° | 117.0° |
| C1' | C2' | C3' | H2'2 | 122.5° | 120.4° |
| C1' | C2' | H2'1 | H2'2 | 122.8° | 122.9° |
| C1' | C2' | C3' | O3' | 153.7° | 81.3° |
| C1' | C2' | C3' | H3' | 87.7° | 158.8° |
| C1' | N9 | C8 | N7 | 176.2° | 180.0° |
| C1' | N9 | C8 | H8 | 3.8° | 0.0° |
| N9 | C1' | C2' | C3' | 98.0° | 154.5° |
| N9 | C1' | C2' | H2'1 | 142.0° | 37.8° |
| N9 | C1' | C2' | H2'2 | 24.5° | 83.3° |
| H1' | C1' | N9 | C8 | 156.3° | 150.0° |
| H1' | C1' | C2' | C3' | 143.1° | 85.2° |
| H1' | C1' | C2' | H2'1 | 23.1° | 158.1° |
| H1' | C1' | C2' | H2'2 | 94.5° | 37.0° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| C3' | C2' | H2'1 | H2'2 | 122.8° | 125.7° |
| C2' | C3' | O3' | H3' | 123.6° | 123.5° |
| C2' | C3' | O3' | HO3' | 5.5° | 157.0° |
| H2'1 | C2' | C3' | O3' | 33.7° | 161.6° |
| H2'1 | C2' | C3' | H3' | 152.3° | 41.7° |
| H2'2 | C2' | C3' | O3' | 83.8° | 39.1° |
| H2'2 | C2' | C3' | H3' | 34.8° | 80.8° |
| H3' | C3' | O3' | HO3' | 129.0° | 33.6° |
