G1M
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C2 | sing | 1.36Å | 1.37Å | |
| N1 | C6 | sing | 1.35Å | 1.39Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| C2 | N2 | sing | 1.37Å | 1.34Å | |
| C2 | N3 | doub | 1.31Å | 1.32Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| N2 | HN2A | sing | 0.97Å | 1.00Å | |
| N3 | C4 | sing | 1.34Å | 1.35Å | |
| C4 | C5 | doub | 1.40Å | 1.38Å | Aromatic |
| C4 | N9 | sing | 1.37Å | 1.37Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.42Å | |
| C5 | N7 | sing | 1.36Å | 1.39Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.24Å | |
| N7 | C8 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | N9 | sing | 1.37Å | 1.38Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N9 | C1' | sing | 1.47Å | 1.46Å | |
| PA | O1A | sing | 1.61Å | 1.72Å | |
| PA | O2A | doub | 1.48Å | 1.48Å | |
| PA | O3A | sing | 1.61Å | 1.50Å | |
| PA | O5' | sing | 1.61Å | 1.60Å | |
| PB | O1B | sing | 1.61Å | 1.72Å | |
| PB | O2B | doub | 1.48Å | 1.49Å | |
| PB | O3A | sing | 1.61Å | 1.50Å | |
| PB | C3B | sing | 1.82Å | 1.88Å | |
| PG | O1G | sing | 1.61Å | 1.72Å | |
| PG | O2G | sing | 1.61Å | 1.72Å | |
| PG | C3B | sing | 1.82Å | 1.88Å | |
| PG | O3G | doub | 1.48Å | 1.48Å | |
| C1' | C2' | sing | 1.54Å | 1.53Å | |
| C1' | O4' | sing | 1.44Å | 1.43Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C2' | C3' | sing | 1.55Å | 1.52Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'A | sing | 1.09Å | 1.10Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C4' | sing | 1.55Å | 1.52Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C3B | C3B2 | sing | 1.53Å | 1.52Å | |
| C3B | H3B | sing | 1.09Å | 1.10Å | |
| C3B2 | HC3B | sing | 1.09Å | 1.10Å | |
| C3B2 | HC3A | sing | 1.09Å | 1.10Å | |
| C3B2 | HC3C | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| O1A | H17 | sing | 0.97Å | 0.95Å | |
| O1B | H18 | sing | 0.97Å | 0.95Å | |
| O1G | H19 | sing | 0.97Å | 0.95Å | |
| O2G | H20 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 125.1° | 120.4° |
| C2 | N1 | HN1 | 117.5° | 119.8° |
| N1 | C2 | N2 | 116.4° | 119.1° |
| N1 | C2 | N3 | 123.9° | 121.9° |
| C6 | N1 | HN1 | 117.5° | 119.8° |
| N1 | C6 | C5 | 111.6° | 118.3° |
| N1 | C6 | O6 | 120.0° | 120.9° |
| N2 | C2 | N3 | 119.7° | 119.1° |
| C2 | N2 | HN2 | 120.0° | 120.0° |
| C2 | N2 | HN2A | 120.0° | 120.0° |
| C2 | N3 | C4 | 111.9° | 121.1° |
| HN2 | N2 | HN2A | 120.0° | 120.0° |
| N3 | C4 | C5 | 128.7° | 119.7° |
| N3 | C4 | N9 | 125.9° | 134.2° |
| C5 | C4 | N9 | 105.4° | 106.1° |
| C4 | C5 | C6 | 118.8° | 118.6° |
| C4 | C5 | N7 | 110.8° | 107.3° |
| C4 | N9 | C8 | 106.4° | 107.5° |
| C4 | N9 | C1' | 126.0° | 126.3° |
| C6 | C5 | N7 | 130.4° | 134.2° |
| C5 | C6 | O6 | 128.5° | 120.8° |
| C5 | N7 | C8 | 104.3° | 109.4° |
| N7 | C8 | N9 | 113.1° | 109.8° |
| N7 | C8 | H8 | 123.5° | 125.1° |
| N9 | C8 | H8 | 123.5° | 125.1° |
| C8 | N9 | C1' | 127.5° | 126.3° |
| N9 | C1' | C2' | 112.5° | 109.9° |
| N9 | C1' | O4' | 108.3° | 109.8° |
| N9 | C1' | H1' | 107.5° | 109.9° |
| O1A | PA | O2A | 119.2° | 109.5° |
| O1A | PA | O3A | 109.3° | 109.4° |
| O1A | PA | O5' | 106.2° | 109.5° |
| PA | O1A | H17 | 109.5° | 114.0° |
| O2A | PA | O3A | 108.5° | 109.5° |
| O2A | PA | O5' | 107.3° | 109.5° |
| O3A | PA | O5' | 105.6° | 109.5° |
| PA | O3A | PB | 129.3° | 134.0° |
| PA | O5' | C5' | 120.7° | 123.0° |
| O1B | PB | O2B | 119.4° | 109.5° |
| O1B | PB | O3A | 106.2° | 109.5° |
| O1B | PB | C3B | 105.5° | 109.5° |
| PB | O1B | H18 | 109.5° | 114.0° |
| O2B | PB | O3A | 111.5° | 109.5° |
| O2B | PB | C3B | 108.2° | 109.5° |
| O3A | PB | C3B | 105.1° | 109.5° |
| PB | C3B | PG | 116.5° | 109.5° |
| PB | C3B | C3B2 | 107.1° | 109.5° |
| PB | C3B | H3B | 105.4° | 109.5° |
| O1G | PG | O2G | 119.7° | 109.5° |
| O1G | PG | C3B | 104.5° | 109.5° |
| O1G | PG | O3G | 108.4° | 109.5° |
| PG | O1G | H19 | 109.5° | 114.0° |
| O2G | PG | C3B | 106.9° | 109.5° |
| O2G | PG | O3G | 108.6° | 109.4° |
| PG | O2G | H20 | 109.5° | 114.0° |
| C3B | PG | O3G | 108.2° | 109.5° |
| PG | C3B | C3B2 | 106.4° | 109.5° |
| PG | C3B | H3B | 106.1° | 109.5° |
| C2' | C1' | O4' | 107.1° | 107.3° |
| C2' | C1' | H1' | 108.7° | 109.9° |
| C1' | C2' | C3' | 102.4° | 104.2° |
| C1' | C2' | H2' | 111.9° | 110.5° |
| C1' | C2' | H2'A | 111.9° | 110.5° |
| O4' | C1' | H1' | 112.9° | 110.0° |
| C1' | O4' | C4' | 108.8° | 106.9° |
| C3' | C2' | H2' | 111.9° | 110.5° |
| C3' | C2' | H2'A | 111.9° | 110.5° |
| C2' | C3' | O3' | 111.2° | 110.9° |
| C2' | C3' | C4' | 101.2° | 102.1° |
| C2' | C3' | H3' | 114.2° | 110.9° |
| H2' | C2' | H2'A | 106.9° | 110.5° |
| O3' | C3' | C4' | 110.9° | 110.9° |
| O3' | C3' | H3' | 105.0° | 110.8° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C4' | C3' | H3' | 114.4° | 111.0° |
| C3' | C4' | O4' | 103.9° | 103.5° |
| C3' | C4' | C5' | 115.8° | 110.6° |
| C3' | C4' | H4' | 109.5° | 110.6° |
| C3B2 | C3B | H3B | 115.7° | 109.5° |
| C3B | C3B2 | HC3B | 109.5° | 109.5° |
| C3B | C3B2 | HC3A | 109.4° | 109.5° |
| C3B | C3B2 | HC3C | 109.5° | 109.4° |
| HC3B | C3B2 | HC3A | 109.5° | 109.5° |
| HC3B | C3B2 | HC3C | 109.4° | 109.4° |
| HC3A | C3B2 | HC3C | 109.5° | 109.5° |
| O4' | C4' | C5' | 110.6° | 110.6° |
| O4' | C4' | H4' | 114.8° | 110.6° |
| C5' | C4' | H4' | 102.6° | 110.7° |
| C4' | C5' | O5' | 110.8° | 109.4° |
| C4' | C5' | H5' | 109.0° | 109.5° |
| C4' | C5' | H5'A | 109.0° | 109.5° |
| O5' | C5' | H5' | 109.0° | 109.5° |
| O5' | C5' | H5'A | 109.0° | 109.5° |
| H5' | C5' | H5'A | 109.9° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | HN1 | 180.0° | 179.8° |
| N1 | C2 | N2 | N3 | 179.5° | 179.9° |
| N1 | C2 | N2 | HN2 | 179.5° | 0.0° |
| N1 | C2 | N2 | HN2A | 0.5° | 179.9° |
| N1 | C2 | N3 | C4 | 1.2° | 0.0° |
| C2 | N1 | C6 | C5 | 0.4° | 0.0° |
| C2 | N1 | C6 | O6 | 179.1° | 180.0° |
| C6 | N1 | C2 | N2 | 178.6° | 180.0° |
| C6 | N1 | C2 | N3 | 0.9° | 0.1° |
| N1 | C6 | C5 | C4 | 1.2° | 0.0° |
| N1 | C6 | C5 | O6 | 179.4° | 180.0° |
| N1 | C6 | C5 | N7 | 179.1° | 180.0° |
| HN1 | N1 | C2 | N2 | 1.4° | 0.2° |
| HN1 | N1 | C2 | N3 | 179.1° | 179.7° |
| HN1 | N1 | C6 | C5 | 179.6° | 179.8° |
| HN1 | N1 | C6 | O6 | 0.9° | 0.2° |
| C2 | N2 | HN2 | HN2A | 180.0° | 179.9° |
| N2 | C2 | N3 | C4 | 178.3° | 180.0° |
| N3 | C2 | N2 | HN2 | 0.0° | 179.9° |
| N3 | C2 | N2 | HN2A | 180.0° | 0.0° |
| C2 | N3 | C4 | C5 | 0.3° | 0.0° |
| C2 | N3 | C4 | N9 | 179.5° | 179.9° |
| N3 | C4 | C5 | N9 | 179.3° | 179.9° |
| N3 | C4 | C5 | C6 | 1.0° | 0.1° |
| N3 | C4 | C5 | N7 | 179.3° | 180.0° |
| N3 | C4 | N9 | C8 | 179.1° | 180.0° |
| N3 | C4 | N9 | C1' | 2.5° | 0.1° |
| C4 | C5 | C6 | N7 | 179.7° | 180.0° |
| C4 | C5 | C6 | O6 | 178.2° | 179.9° |
| C4 | C5 | N7 | C8 | 0.6° | 0.0° |
| C5 | C4 | N9 | C8 | 1.5° | 0.1° |
| C5 | C4 | N9 | C1' | 176.9° | 180.0° |
| N9 | C4 | C5 | C6 | 178.4° | 180.0° |
| N9 | C4 | C5 | N7 | 1.4° | 0.1° |
| C4 | N9 | C8 | N7 | 1.3° | 0.1° |
| C4 | N9 | C8 | C1' | 178.4° | 179.9° |
| C4 | N9 | C8 | H8 | 178.7° | 180.0° |
| C4 | N9 | C1' | C2' | 97.8° | 84.9° |
| C4 | N9 | C1' | O4' | 144.1° | 157.2° |
| C4 | N9 | C1' | H1' | 21.8° | 36.1° |
| C6 | C5 | N7 | C8 | 179.1° | 180.0° |
| N7 | C5 | C6 | O6 | 1.5° | 0.0° |
| C5 | N7 | C8 | N9 | 0.4° | 0.0° |
| C5 | N7 | C8 | H8 | 179.6° | 179.9° |
| N7 | C8 | N9 | H8 | 180.0° | 179.9° |
| N7 | C8 | N9 | C1' | 177.1° | 180.0° |
| C8 | N9 | C1' | C2' | 80.3° | 95.0° |
| C8 | N9 | C1' | O4' | 37.8° | 22.9° |
| C8 | N9 | C1' | H1' | 160.1° | 144.0° |
| H8 | C8 | N9 | C1' | 2.9° | 0.1° |
| N9 | C1' | C2' | O4' | 118.8° | 119.4° |
| N9 | C1' | C2' | H1' | 118.9° | 121.0° |
| N9 | C1' | O4' | H1' | 118.9° | 121.1° |
| N9 | C1' | C2' | C3' | 98.4° | 121.5° |
| N9 | C1' | C2' | H2' | 141.6° | 119.9° |
| N9 | C1' | C2' | H2'A | 21.6° | 2.8° |
| N9 | C1' | O4' | C4' | 126.5° | 146.0° |
| O1A | PA | O2A | O3A | 125.8° | 120.0° |
| O1A | PA | O2A | O5' | 120.5° | 120.0° |
| O1A | PA | O3A | O5' | 113.8° | 120.0° |
| O1A | PA | O3A | PB | 0.9° | 75.0° |
| O1A | PA | O5' | C5' | 54.3° | 65.0° |
| O2A | PA | O3A | O5' | 114.8° | 120.0° |
| O2A | PA | O3A | PB | 130.5° | 45.0° |
| O2A | PA | O5' | C5' | 177.3° | 55.0° |
| O2A | PA | O1A | H17 | 138.7° | 179.9° |
| PA | O3A | PB | O1B | 158.7° | 60.0° |
| PA | O3A | PB | O2B | 27.2° | 60.0° |
| PA | O3A | PB | C3B | 89.8° | 180.0° |
| O3A | PA | O5' | C5' | 61.7° | 175.0° |
| O3A | PA | O1A | H17 | 13.3° | 60.0° |
| O5' | PA | O3A | PB | 114.7° | 165.0° |
| PA | O5' | C5' | C4' | 121.7° | 180.0° |
| PA | O5' | C5' | H5' | 118.3° | 60.0° |
| PA | O5' | C5' | H5'A | 1.8° | 60.0° |
| O5' | PA | O1A | H17 | 100.2° | 60.0° |
| O1B | PB | O2B | O3A | 124.4° | 120.0° |
| O1B | PB | O2B | C3B | 120.5° | 120.0° |
| O1B | PB | O3A | C3B | 111.5° | 120.0° |
| O1B | PB | C3B | PG | 141.9° | 75.0° |
| O1B | PB | C3B | C3B2 | 23.0° | 45.0° |
| O1B | PB | C3B | H3B | 100.7° | 165.0° |
| O2B | PB | O3A | C3B | 117.0° | 120.0° |
| O2B | PB | C3B | PG | 13.1° | 45.0° |
| O2B | PB | C3B | C3B2 | 105.9° | 165.0° |
| O2B | PB | C3B | H3B | 130.5° | 75.0° |
| O2B | PB | O1B | H18 | 0.0° | 180.0° |
| O3A | PB | C3B | PG | 106.1° | 165.0° |
| O3A | PB | C3B | C3B2 | 134.9° | 75.0° |
| O3A | PB | C3B | H3B | 11.3° | 45.0° |
| O3A | PB | O1B | H18 | 126.9° | 60.0° |
| PB | C3B | PG | O1G | 36.7° | 180.0° |
| PB | C3B | PG | O2G | 164.5° | 60.0° |
| PB | C3B | PG | C3B2 | 119.3° | 120.0° |
| PB | C3B | PG | H3B | 116.9° | 120.0° |
| PB | C3B | PG | O3G | 78.7° | 60.0° |
| PB | C3B | C3B2 | H3B | 117.1° | 120.0° |
| PB | C3B | C3B2 | HC3B | 180.0° | 60.0° |
| PB | C3B | C3B2 | HC3A | 60.0° | 179.9° |
| PB | C3B | C3B2 | HC3C | 60.0° | 60.0° |
| C3B | PB | O1B | H18 | 121.9° | 60.0° |
| O1G | PG | O2G | C3B | 118.3° | 120.0° |
| O1G | PG | O2G | O3G | 125.2° | 120.0° |
| O1G | PG | C3B | O3G | 115.4° | 120.0° |
| O1G | PG | C3B | C3B2 | 156.0° | 60.0° |
| O1G | PG | C3B | H3B | 80.3° | 60.0° |
| O1G | PG | O2G | H20 | 125.2° | 60.0° |
| O2G | PG | C3B | O3G | 116.8° | 120.0° |
| O2G | PG | C3B | C3B2 | 76.2° | 180.0° |
| O2G | PG | C3B | H3B | 47.6° | 60.0° |
| O2G | PG | O1G | H19 | 125.3° | 60.0° |
| PG | C3B | C3B2 | H3B | 117.6° | 120.0° |
| PG | C3B | C3B2 | HC3B | 54.8° | 180.0° |
| PG | C3B | C3B2 | HC3A | 65.3° | 59.9° |
| PG | C3B | C3B2 | HC3C | 174.7° | 60.0° |
| C3B | PG | O1G | H19 | 115.2° | 180.0° |
| C3B | PG | O2G | H20 | 116.5° | 60.1° |
| O3G | PG | C3B | C3B2 | 40.6° | 60.0° |
| O3G | PG | C3B | H3B | 164.4° | 180.0° |
| O3G | PG | O1G | H19 | 0.0° | 60.0° |
| O3G | PG | O2G | H20 | 0.0° | 180.0° |
| C2' | C1' | O4' | H1' | 119.6° | 119.5° |
| C1' | C2' | C3' | H2' | 120.0° | 118.7° |
| C1' | C2' | C3' | H2'A | 120.0° | 118.7° |
| C1' | C2' | H2' | H2'A | 122.9° | 122.7° |
| C1' | C2' | C3' | O3' | 154.1° | 139.1° |
| C1' | C2' | C3' | C4' | 36.2° | 20.9° |
| C1' | C2' | C3' | H3' | 87.3° | 97.4° |
| C2' | C1' | O4' | C4' | 5.0° | 26.6° |
| O4' | C1' | C2' | C3' | 20.4° | 2.1° |
| O4' | C1' | C2' | H2' | 99.5° | 120.7° |
| O4' | C1' | C2' | H2'A | 140.5° | 116.6° |
| C1' | O4' | C4' | C3' | 28.5° | 40.1° |
| C1' | O4' | C4' | C5' | 153.3° | 158.6° |
| C1' | O4' | C4' | H4' | 91.1° | 78.4° |
| H1' | C1' | C2' | C3' | 142.7° | 117.6° |
| H1' | C1' | C2' | H2' | 22.7° | 1.1° |
| H1' | C1' | C2' | H2'A | 97.3° | 123.8° |
| H1' | C1' | O4' | C4' | 114.6° | 93.0° |
| C3' | C2' | H2' | H2'A | 122.9° | 122.6° |
| C2' | C3' | O3' | C4' | 111.8° | 112.7° |
| C2' | C3' | O3' | H3' | 124.0° | 123.6° |
| C2' | C3' | C4' | H3' | 123.3° | 118.2° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.5° |
| C2' | C3' | C4' | O4' | 40.2° | 37.1° |
| C2' | C3' | C4' | C5' | 161.7° | 155.5° |
| C2' | C3' | C4' | H4' | 82.9° | 81.5° |
| H2' | C2' | C3' | O3' | 34.1° | 20.4° |
| H2' | C2' | C3' | C4' | 83.8° | 97.8° |
| H2' | C2' | C3' | H3' | 152.8° | 144.0° |
| H2'A | C2' | C3' | O3' | 85.9° | 102.2° |
| H2'A | C2' | C3' | C4' | 156.2° | 139.6° |
| H2'A | C2' | C3' | H3' | 32.8° | 21.4° |
| O3' | C3' | C4' | H3' | 118.6° | 123.7° |
| O3' | C3' | C4' | O4' | 158.3° | 155.2° |
| O3' | C3' | C4' | C5' | 80.3° | 86.3° |
| O3' | C3' | C4' | H4' | 35.2° | 36.7° |
| C4' | C3' | O3' | HO3' | 68.2° | 174.2° |
| C3' | C4' | O4' | C5' | 124.9° | 118.5° |
| C3' | C4' | O4' | H4' | 119.6° | 118.5° |
| C3' | C4' | C5' | H4' | 119.2° | 123.0° |
| C3' | C4' | C5' | O5' | 60.0° | 175.0° |
| C3' | C4' | C5' | H5' | 179.9° | 55.0° |
| C3' | C4' | C5' | H5'A | 60.0° | 65.0° |
| H3' | C3' | O3' | HO3' | 56.0° | 62.1° |
| H3' | C3' | C4' | O4' | 83.1° | 81.1° |
| H3' | C3' | C4' | C5' | 38.4° | 37.4° |
| H3' | C3' | C4' | H4' | 153.8° | 160.4° |
| C3B | C3B2 | HC3B | HC3A | 120.0° | 120.0° |
| C3B | C3B2 | HC3B | HC3C | 120.0° | 120.0° |
| C3B | C3B2 | HC3A | HC3C | 120.0° | 119.9° |
| H3B | C3B | C3B2 | HC3B | 62.8° | 60.0° |
| H3B | C3B | C3B2 | HC3A | 177.1° | 60.1° |
| H3B | C3B | C3B2 | HC3C | 57.1° | 180.0° |
| HC3B | C3B2 | HC3A | HC3C | 120.0° | 120.0° |
| O4' | C4' | C5' | H4' | 123.0° | 123.0° |
| O4' | C4' | C5' | O5' | 57.8° | 71.0° |
| O4' | C4' | C5' | H5' | 62.1° | 169.1° |
| O4' | C4' | C5' | H5'A | 177.8° | 49.0° |
| C4' | C5' | O5' | H5' | 120.0° | 120.0° |
| C4' | C5' | O5' | H5'A | 120.0° | 120.0° |
| C4' | C5' | H5' | H5'A | 119.5° | 120.0° |
| H4' | C4' | C5' | O5' | 179.2° | 52.0° |
| H4' | C4' | C5' | H5' | 60.8° | 68.0° |
| H4' | C4' | C5' | H5'A | 59.2° | 172.0° |
| O5' | C5' | H5' | H5'A | 119.5° | 120.0° |
