FMD
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
F17 | C1 | sing | 1.35Å | 1.35Å | |
C1 | C2 | doub | 1.40Å | 1.40Å | Aromatic |
C1 | C6 | sing | 1.38Å | 1.40Å | Aromatic |
C2 | C18 | sing | 1.43Å | 1.41Å | |
C2 | C3 | sing | 1.40Å | 1.47Å | Aromatic |
C18 | C19 | trip | 1.17Å | 1.20Å | |
C19 | C20 | sing | 1.47Å | 1.41Å | |
C20 | O27 | sing | 1.43Å | 1.43Å | |
C20 | C23 | sing | 1.53Å | 1.55Å | |
C20 | H20 | sing | 1.09Å | 1.11Å | |
O27 | H27 | sing | 0.97Å | 0.95Å | |
C23 | N28 | sing | 1.47Å | 1.47Å | |
C23 | C24 | sing | 1.53Å | 1.54Å | |
C23 | H23 | sing | 1.09Å | 1.11Å | |
N28 | H281 | sing | 1.01Å | 1.02Å | |
N28 | H282 | sing | 1.01Å | 1.02Å | |
C24 | O26 | sing | 1.43Å | 1.43Å | |
C24 | C25 | sing | 1.53Å | 1.55Å | |
C24 | H24 | sing | 1.09Å | 1.11Å | |
O26 | H26 | sing | 0.97Å | 0.95Å | |
C25 | H251 | sing | 1.09Å | 1.11Å | |
C25 | H252 | sing | 1.09Å | 1.12Å | |
C25 | H253 | sing | 1.09Å | 1.12Å | |
C3 | C4 | doub | 1.40Å | 1.43Å | Aromatic |
C3 | C7 | sing | 1.48Å | 1.36Å | |
C4 | N9 | sing | 1.39Å | 1.38Å | |
C4 | C5 | sing | 1.39Å | 1.39Å | Aromatic |
N9 | C8 | sing | 1.34Å | 1.41Å | |
N9 | HN9 | sing | 0.97Å | 1.02Å | |
C8 | O10 | doub | 1.22Å | 1.21Å | |
C8 | C7 | sing | 1.42Å | 1.50Å | |
C5 | C6 | doub | 1.38Å | 1.41Å | Aromatic |
C5 | HC5 | sing | 1.08Å | 1.10Å | |
C6 | HC6 | sing | 1.08Å | 1.10Å | |
C7 | C11 | doub | 1.39Å | 1.47Å | |
C11 | C12 | sing | 1.40Å | 1.46Å | |
C11 | H11 | sing | 1.08Å | 1.10Å | |
C12 | C13 | doub | 1.39Å | 1.38Å | Aromatic |
C12 | N16 | sing | 1.38Å | 1.38Å | Aromatic |
C13 | O21 | sing | 1.36Å | 1.38Å | |
C13 | C14 | sing | 1.40Å | 1.46Å | Aromatic |
O21 | C22 | sing | 1.43Å | 1.44Å | |
C22 | H221 | sing | 1.09Å | 1.12Å | |
C22 | H222 | sing | 1.09Å | 1.11Å | |
C22 | H223 | sing | 1.09Å | 1.12Å | |
C14 | C15 | doub | 1.35Å | 1.36Å | Aromatic |
C14 | H14 | sing | 1.08Å | 1.10Å | |
C15 | N16 | sing | 1.36Å | 1.36Å | Aromatic |
C15 | H15 | sing | 1.08Å | 1.10Å | |
N16 | H16 | sing | 0.97Å | 1.02Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
F17 | C1 | C2 | 117.3° | 120.0° |
F17 | C1 | C6 | 119.6° | 120.0° |
C2 | C1 | C6 | 123.1° | 120.0° |
C1 | C2 | C18 | 120.0° | 120.3° |
C1 | C2 | C3 | 115.8° | 119.3° |
C1 | C6 | C5 | 120.9° | 120.8° |
C1 | C6 | HC6 | 119.4° | 119.6° |
C18 | C2 | C3 | 124.1° | 120.3° |
C2 | C18 | C19 | 178.9° | 180.0° |
C2 | C3 | C4 | 119.7° | 120.2° |
C2 | C3 | C7 | 132.2° | 133.6° |
C18 | C19 | C20 | 177.7° | 180.0° |
C19 | C20 | O27 | 108.3° | 109.5° |
C19 | C20 | C23 | 114.7° | 109.5° |
C19 | C20 | H20 | 108.9° | 109.5° |
O27 | C20 | C23 | 115.0° | 109.5° |
O27 | C20 | H20 | 108.5° | 109.5° |
C20 | O27 | H27 | 108.3° | 106.7° |
C23 | C20 | H20 | 101.1° | 109.4° |
C20 | C23 | N28 | 113.1° | 109.5° |
C20 | C23 | C24 | 105.9° | 109.5° |
C20 | C23 | H23 | 109.4° | 109.4° |
N28 | C23 | C24 | 109.3° | 109.5° |
N28 | C23 | H23 | 106.0° | 109.5° |
C23 | N28 | H281 | 110.9° | 106.7° |
C23 | N28 | H282 | 113.1° | 106.8° |
C24 | C23 | H23 | 113.2° | 109.5° |
C23 | C24 | O26 | 112.6° | 109.5° |
C23 | C24 | C25 | 113.3° | 109.4° |
C23 | C24 | H24 | 104.4° | 109.5° |
H281 | N28 | H282 | 110.9° | 106.6° |
O26 | C24 | C25 | 109.0° | 109.4° |
O26 | C24 | H24 | 109.0° | 109.5° |
C24 | O26 | H26 | 112.6° | 106.8° |
C25 | C24 | H24 | 108.3° | 109.4° |
C24 | C25 | H251 | 110.8° | 109.4° |
C24 | C25 | H252 | 113.3° | 109.5° |
C24 | C25 | H253 | 110.8° | 109.4° |
H251 | C25 | H252 | 110.8° | 109.5° |
H251 | C25 | H253 | 99.5° | 109.5° |
H252 | C25 | H253 | 110.8° | 109.5° |
C4 | C3 | C7 | 108.2° | 106.2° |
C3 | C4 | N9 | 106.3° | 108.3° |
C3 | C4 | C5 | 121.9° | 119.4° |
C3 | C7 | C8 | 110.8° | 105.7° |
C3 | C7 | C11 | 126.1° | 127.1° |
N9 | C4 | C5 | 131.8° | 132.4° |
C4 | N9 | C8 | 114.1° | 110.9° |
C4 | N9 | HN9 | 122.1° | 124.6° |
C4 | C5 | C6 | 118.6° | 120.4° |
C4 | C5 | HC5 | 120.0° | 119.8° |
C8 | N9 | HN9 | 123.8° | 124.5° |
N9 | C8 | O10 | 123.9° | 125.5° |
N9 | C8 | C7 | 100.6° | 108.9° |
O10 | C8 | C7 | 135.5° | 125.5° |
C8 | C7 | C11 | 123.1° | 127.2° |
C6 | C5 | HC5 | 121.4° | 119.8° |
C5 | C6 | HC6 | 119.7° | 119.6° |
C7 | C11 | C12 | 133.4° | 120.0° |
C7 | C11 | H11 | 113.8° | 120.0° |
C12 | C11 | H11 | 112.8° | 120.0° |
C11 | C12 | C13 | 129.3° | 126.4° |
C11 | C12 | N16 | 121.8° | 126.4° |
C13 | C12 | N16 | 109.0° | 107.1° |
C12 | C13 | O21 | 126.1° | 126.5° |
C12 | C13 | C14 | 105.0° | 107.0° |
C12 | N16 | C15 | 109.3° | 108.7° |
C12 | N16 | H16 | 126.0° | 125.7° |
O21 | C13 | C14 | 128.9° | 126.5° |
C13 | O21 | C22 | 119.3° | 106.8° |
C13 | C14 | C15 | 107.8° | 108.0° |
C13 | C14 | H14 | 128.9° | 126.0° |
O21 | C22 | H221 | 108.7° | 109.5° |
O21 | C22 | H222 | 119.3° | 109.5° |
O21 | C22 | H223 | 108.7° | 109.5° |
H221 | C22 | H222 | 108.7° | 109.5° |
H221 | C22 | H223 | 101.3° | 109.4° |
H222 | C22 | H223 | 108.7° | 109.5° |
C15 | C14 | H14 | 123.3° | 126.0° |
C14 | C15 | N16 | 108.9° | 109.2° |
C14 | C15 | H15 | 125.6° | 125.3° |
N16 | C15 | H15 | 125.5° | 125.4° |
C15 | N16 | H16 | 124.7° | 125.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
F17 | C1 | C2 | C6 | 179.7° | 180.0° |
F17 | C1 | C2 | C18 | 1.0° | 0.0° |
F17 | C1 | C2 | C3 | 179.5° | 179.7° |
F17 | C1 | C6 | C5 | 179.5° | 180.0° |
F17 | C1 | C6 | HC6 | 0.5° | 0.0° |
C1 | C2 | C18 | C3 | 179.5° | 179.7° |
C1 | C2 | C18 | C19 | 172.9° | 162.6° |
C1 | C2 | C3 | C4 | 0.2° | 0.6° |
C1 | C2 | C3 | C7 | 179.2° | 179.6° |
C2 | C1 | C6 | C5 | 0.2° | 0.1° |
C2 | C1 | C6 | HC6 | 179.8° | 180.0° |
C6 | C1 | C2 | C18 | 179.3° | 180.0° |
C6 | C1 | C2 | C3 | 0.2° | 0.3° |
C1 | C6 | C5 | C4 | 0.3° | 0.0° |
C1 | C6 | C5 | HC6 | 180.0° | 179.9° |
C1 | C6 | C5 | HC5 | 179.7° | 179.9° |
C2 | C18 | C19 | C20 | 38.0° | 125.5° |
C18 | C2 | C3 | C4 | 179.7° | 179.7° |
C18 | C2 | C3 | C7 | 1.4° | 0.7° |
C3 | C2 | C18 | C19 | 7.6° | 17.7° |
C2 | C3 | C4 | C7 | 179.2° | 179.3° |
C2 | C3 | C4 | N9 | 179.6° | 179.7° |
C2 | C3 | C4 | C5 | 0.7° | 0.5° |
C2 | C3 | C7 | C8 | 179.7° | 179.5° |
C2 | C3 | C7 | C11 | 0.9° | 0.7° |
C18 | C19 | C20 | O27 | 105.6° | 108.1° |
C18 | C19 | C20 | C23 | 124.5° | 131.9° |
C18 | C19 | C20 | H20 | 12.2° | 11.9° |
C19 | C20 | O27 | C23 | 129.7° | 120.0° |
C19 | C20 | O27 | H20 | 118.0° | 120.0° |
C19 | C20 | C23 | H20 | 116.9° | 120.0° |
C19 | C20 | O27 | H27 | 180.0° | 60.0° |
C19 | C20 | C23 | N28 | 23.6° | 60.0° |
C19 | C20 | C23 | C24 | 143.2° | 180.0° |
C19 | C20 | C23 | H23 | 94.4° | 60.0° |
O27 | C20 | C23 | H20 | 116.7° | 120.0° |
O27 | C20 | C23 | N28 | 150.0° | 180.0° |
O27 | C20 | C23 | C24 | 90.3° | 60.0° |
O27 | C20 | C23 | H23 | 32.1° | 60.0° |
C23 | C20 | O27 | H27 | 50.3° | 60.1° |
C20 | C23 | N28 | C24 | 117.7° | 120.0° |
C20 | C23 | N28 | H23 | 119.9° | 120.0° |
C20 | C23 | C24 | H23 | 119.9° | 120.0° |
C20 | C23 | N28 | H281 | 54.7° | 60.1° |
C20 | C23 | N28 | H282 | 180.0° | 173.8° |
C20 | C23 | C24 | O26 | 153.2° | 60.1° |
C20 | C23 | C24 | C25 | 28.8° | 180.0° |
C20 | C23 | C24 | H24 | 88.7° | 60.0° |
H20 | C20 | O27 | H27 | 62.0° | 180.0° |
H20 | C20 | C23 | N28 | 93.3° | 60.0° |
H20 | C20 | C23 | C24 | 26.3° | 60.0° |
H20 | C20 | C23 | H23 | 148.7° | 180.0° |
N28 | C23 | C24 | H23 | 118.0° | 120.0° |
C23 | N28 | H281 | H282 | 126.5° | 113.8° |
N28 | C23 | C24 | O26 | 84.7° | 59.9° |
N28 | C23 | C24 | C25 | 151.0° | 60.0° |
N28 | C23 | C24 | H24 | 33.4° | 180.0° |
C24 | C23 | N28 | H281 | 63.0° | 60.0° |
C24 | C23 | N28 | H282 | 62.3° | 53.8° |
C23 | C24 | O26 | C25 | 126.6° | 119.9° |
C23 | C24 | O26 | H24 | 115.3° | 120.1° |
C23 | C24 | C25 | H24 | 115.3° | 120.0° |
C23 | C24 | O26 | H26 | 180.0° | 60.0° |
C23 | C24 | C25 | H251 | 54.7° | 180.0° |
C23 | C24 | C25 | H252 | 180.0° | 60.0° |
C23 | C24 | C25 | H253 | 54.7° | 60.0° |
H23 | C23 | N28 | H281 | 174.6° | 180.0° |
H23 | C23 | N28 | H282 | 60.1° | 66.2° |
H23 | C23 | C24 | O26 | 33.3° | 180.0° |
H23 | C23 | C24 | C25 | 91.1° | 60.0° |
H23 | C23 | C24 | H24 | 151.3° | 59.9° |
O26 | C24 | C25 | H24 | 118.5° | 120.1° |
O26 | C24 | C25 | H251 | 71.6° | 60.0° |
O26 | C24 | C25 | H252 | 53.7° | 180.0° |
O26 | C24 | C25 | H253 | 179.0° | 59.9° |
C25 | C24 | O26 | H26 | 53.4° | 60.0° |
C24 | C25 | H251 | H252 | 126.7° | 120.0° |
C24 | C25 | H251 | H253 | 116.7° | 119.9° |
C24 | C25 | H252 | H253 | 125.3° | 120.0° |
H24 | C24 | O26 | H26 | 64.7° | 180.0° |
H24 | C24 | C25 | H251 | 170.0° | 60.1° |
H24 | C24 | C25 | H252 | 64.7° | 60.0° |
H24 | C24 | C25 | H253 | 60.5° | NaN° |
H251 | C25 | H252 | H253 | 109.5° | 120.0° |
C3 | C4 | N9 | C5 | 178.7° | 179.7° |
C3 | C4 | N9 | C8 | 1.4° | 0.3° |
C3 | C4 | N9 | HN9 | 178.6° | 179.8° |
C4 | C3 | C7 | C8 | 0.7° | 0.4° |
C3 | C4 | C5 | C6 | 0.7° | 0.3° |
C3 | C4 | C5 | HC5 | 179.2° | 179.7° |
C4 | C3 | C7 | C11 | 179.9° | 179.9° |
C7 | C3 | C4 | N9 | 1.2° | 0.4° |
C7 | C3 | C4 | C5 | 179.9° | 179.8° |
C3 | C7 | C8 | N9 | 0.1° | 0.2° |
C3 | C7 | C8 | O10 | 179.7° | 179.7° |
C3 | C7 | C8 | C11 | 179.4° | 179.8° |
C3 | C7 | C11 | C12 | 176.3° | 172.6° |
C3 | C7 | C11 | H11 | 3.6° | 7.4° |
C4 | N9 | C8 | HN9 | 180.0° | 179.9° |
C4 | N9 | C8 | O10 | 179.4° | 180.0° |
C4 | N9 | C8 | C7 | 0.9° | 0.1° |
N9 | C4 | C5 | C6 | 179.3° | 180.0° |
N9 | C4 | C5 | HC5 | 0.7° | 0.0° |
C5 | C4 | N9 | C8 | 179.9° | 180.0° |
C5 | C4 | N9 | HN9 | 0.1° | 0.0° |
C4 | C5 | C6 | HC5 | 180.0° | 180.0° |
C4 | C5 | C6 | HC6 | 179.7° | 180.0° |
N9 | C8 | O10 | C7 | 179.5° | 179.9° |
N9 | C8 | C7 | C11 | 179.3° | 180.0° |
HN9 | N9 | C8 | O10 | 0.6° | 0.1° |
HN9 | N9 | C8 | C7 | 179.0° | 180.0° |
O10 | C8 | C7 | C11 | 0.2° | 0.0° |
C8 | C7 | C11 | C12 | 3.0° | 7.7° |
C8 | C7 | C11 | H11 | 177.0° | 172.4° |
HC5 | C5 | C6 | HC6 | 0.3° | 0.0° |
C7 | C11 | C12 | H11 | 180.0° | 180.0° |
C7 | C11 | C12 | C13 | 178.3° | 145.7° |
C7 | C11 | C12 | N16 | 2.8° | 34.9° |
C11 | C12 | C13 | N16 | 179.0° | 179.5° |
C11 | C12 | C13 | O21 | 0.9° | 0.3° |
C11 | C12 | C13 | C14 | 179.6° | 180.0° |
C11 | C12 | N16 | C15 | 179.5° | 180.0° |
C11 | C12 | N16 | H16 | 0.5° | 0.2° |
H11 | C11 | C12 | C13 | 1.7° | 34.3° |
H11 | C11 | C12 | N16 | 177.2° | 145.1° |
C12 | C13 | O21 | C14 | 178.4° | 179.6° |
C12 | C13 | O21 | C22 | 157.0° | 179.6° |
C12 | C13 | C14 | C15 | 1.0° | 0.4° |
C12 | C13 | C14 | H14 | 179.0° | 179.8° |
C13 | C12 | N16 | C15 | 1.4° | 0.4° |
C13 | C12 | N16 | H16 | 178.6° | 179.8° |
N16 | C12 | C13 | O21 | 179.9° | 179.9° |
N16 | C12 | C13 | C14 | 1.4° | 0.5° |
C12 | N16 | C15 | C14 | 0.7° | 0.2° |
C12 | N16 | C15 | H16 | 180.0° | 179.8° |
C12 | N16 | C15 | H15 | 179.3° | 179.7° |
C13 | O21 | C22 | H221 | 54.7° | 180.0° |
C13 | O21 | C22 | H222 | 180.0° | 60.0° |
C13 | O21 | C22 | H223 | 54.7° | 60.0° |
O21 | C13 | C14 | C15 | 179.6° | 180.0° |
O21 | C13 | C14 | H14 | 0.4° | 0.1° |
C14 | C13 | O21 | C22 | 24.6° | 0.1° |
C13 | C14 | C15 | H14 | 180.0° | 179.9° |
C13 | C14 | C15 | N16 | 0.2° | 0.1° |
C13 | C14 | C15 | H15 | 179.8° | 180.0° |
O21 | C22 | H221 | H222 | 131.2° | 120.0° |
O21 | C22 | H221 | H223 | 114.3° | 120.0° |
O21 | C22 | H222 | H223 | 125.3° | 120.0° |
H221 | C22 | H222 | H223 | 109.5° | 120.0° |
C14 | C15 | N16 | H15 | 180.0° | 179.9° |
C14 | C15 | N16 | H16 | 179.3° | 180.0° |
H14 | C14 | C15 | N16 | 179.8° | 180.0° |
H14 | C14 | C15 | H15 | 0.2° | 0.1° |
H15 | C15 | N16 | H16 | 0.7° | 0.1° |