FHG
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N2 | C2 | sing | 1.37Å | 1.36Å | |
C2 | N1 | sing | 1.36Å | 1.39Å | |
C2 | N3 | doub | 1.31Å | 1.34Å | |
N1 | C6 | sing | 1.35Å | 1.41Å | |
N3 | C4 | sing | 1.34Å | 1.35Å | |
C6 | O6 | doub | 1.22Å | 1.24Å | |
C6 | C5 | sing | 1.41Å | 1.41Å | |
C4 | C5 | doub | 1.40Å | 1.38Å | Aromatic |
C4 | N9 | sing | 1.37Å | 1.38Å | Aromatic |
C2' | C1' | sing | 1.54Å | 1.53Å | |
C2' | C3' | sing | 1.55Å | 1.53Å | |
C5 | N7 | sing | 1.36Å | 1.39Å | Aromatic |
C1' | N9 | sing | 1.47Å | 1.48Å | |
C1' | O4' | sing | 1.44Å | 1.42Å | |
N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
O3' | C3' | sing | 1.43Å | 1.44Å | |
C3' | C4' | sing | 1.55Å | 1.53Å | |
N7 | C8 | doub | 1.30Å | 1.32Å | Aromatic |
O4' | C4' | sing | 1.44Å | 1.43Å | |
C4' | C5' | sing | 1.53Å | 1.50Å | |
O1B | P2 | doub | 1.48Å | 1.51Å | |
C5' | O5' | sing | 1.43Å | 1.43Å | |
O5' | P1 | sing | 1.61Å | 1.61Å | |
P2 | O3A | sing | 1.61Å | 1.53Å | |
P2 | O2B | sing | 1.61Å | 1.47Å | |
P2 | C3B | sing | 1.82Å | 1.86Å | |
O3A | P1 | sing | 1.61Å | 1.55Å | |
C3B | F2B | sing | 1.40Å | 1.36Å | |
C3B | P3 | sing | 1.82Å | 1.86Å | |
P1 | O2A | doub | 1.48Å | 1.48Å | |
P1 | O1A | sing | 1.61Å | 1.46Å | |
O3G | P3 | doub | 1.48Å | 1.46Å | |
P3 | O1G | sing | 1.61Å | 1.50Å | |
P3 | O2G | sing | 1.61Å | 1.50Å | |
O1A | H1 | sing | 0.97Å | 0.95Å | |
O2B | H2 | sing | 0.97Å | 0.95Å | |
C3B | H3 | sing | 1.09Å | 1.10Å | |
O1G | H4 | sing | 0.97Å | 0.95Å | |
O2G | H5 | sing | 0.97Å | 0.95Å | |
C5' | H6 | sing | 1.09Å | 1.10Å | |
C5' | H7 | sing | 1.09Å | 1.10Å | |
C4' | H8 | sing | 1.09Å | 1.10Å | |
C1' | H9 | sing | 1.09Å | 1.10Å | |
N2 | H10 | sing | 0.97Å | 1.00Å | |
N2 | H11 | sing | 0.97Å | 1.00Å | |
N1 | H12 | sing | 0.97Å | 1.00Å | |
C8 | H13 | sing | 1.08Å | 1.08Å | |
C2' | H14 | sing | 1.09Å | 1.10Å | |
C2' | H15 | sing | 1.09Å | 1.10Å | |
C3' | H16 | sing | 1.09Å | 1.10Å | |
O3' | H17 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N2 | C2 | N1 | 117.3° | 119.0° |
N2 | C2 | N3 | 119.2° | 119.1° |
C2 | N2 | H10 | 120.0° | 120.0° |
C2 | N2 | H11 | 120.0° | 120.0° |
N1 | C2 | N3 | 123.3° | 121.9° |
C2 | N1 | C6 | 123.9° | 120.4° |
C2 | N1 | H12 | 118.0° | 119.8° |
C2 | N3 | C4 | 112.9° | 121.1° |
N1 | C6 | O6 | 122.3° | 120.8° |
N1 | C6 | C5 | 112.4° | 118.3° |
C6 | N1 | H12 | 118.0° | 119.8° |
N3 | C4 | C5 | 128.0° | 119.7° |
N3 | C4 | N9 | 126.3° | 134.2° |
O6 | C6 | C5 | 125.2° | 120.8° |
C6 | C5 | C4 | 119.4° | 118.6° |
C6 | C5 | N7 | 128.7° | 134.2° |
C5 | C4 | N9 | 105.6° | 106.1° |
C4 | C5 | N7 | 111.8° | 107.2° |
C4 | N9 | C1' | 126.3° | 126.3° |
C4 | N9 | C8 | 105.3° | 107.5° |
C1' | C2' | C3' | 102.7° | 104.3° |
C2' | C1' | N9 | 111.7° | 109.9° |
C2' | C1' | O4' | 105.2° | 107.3° |
C2' | C1' | H9 | 109.2° | 110.0° |
C1' | C2' | H14 | 111.2° | 110.5° |
C1' | C2' | H15 | 111.1° | 110.5° |
C2' | C3' | O3' | 113.7° | 110.9° |
C2' | C3' | C4' | 99.8° | 102.0° |
C3' | C2' | H14 | 111.1° | 110.3° |
C3' | C2' | H15 | 111.1° | 110.6° |
C2' | C3' | H16 | 110.1° | 110.8° |
C5 | N7 | C8 | 102.8° | 109.3° |
N9 | C1' | O4' | 109.8° | 109.9° |
C1' | N9 | C8 | 128.2° | 126.2° |
N9 | C1' | H9 | 110.0° | 109.8° |
C1' | O4' | C4' | 110.8° | 107.0° |
O4' | C1' | H9 | 110.8° | 109.9° |
N9 | C8 | N7 | 114.4° | 109.8° |
N9 | C8 | H13 | 122.8° | 125.1° |
O3' | C3' | C4' | 111.0° | 111.2° |
O3' | C3' | H16 | 111.4° | 110.8° |
C3' | O3' | H17 | 109.5° | 114.0° |
C3' | C4' | O4' | 103.4° | 103.6° |
C3' | C4' | C5' | 115.0° | 110.6° |
C3' | C4' | H8 | 109.5° | 110.6° |
C4' | C3' | H16 | 110.2° | 110.8° |
N7 | C8 | H13 | 122.8° | 125.1° |
O4' | C4' | C5' | 107.9° | 110.6° |
O4' | C4' | H8 | 110.9° | 110.6° |
C4' | C5' | O5' | 108.9° | 109.5° |
C4' | C5' | H6 | 109.6° | 109.5° |
C4' | C5' | H7 | 109.6° | 109.5° |
C5' | C4' | H8 | 109.9° | 110.6° |
O1B | P2 | O3A | 109.6° | 109.5° |
O1B | P2 | O2B | 117.1° | 109.4° |
O1B | P2 | C3B | 100.5° | 109.5° |
C5' | O5' | P1 | 118.0° | 123.0° |
O5' | C5' | H6 | 109.6° | 109.5° |
O5' | C5' | H7 | 109.6° | 109.5° |
O5' | P1 | O3A | 104.1° | 109.5° |
O5' | P1 | O2A | 107.3° | 109.5° |
O5' | P1 | O1A | 108.2° | 109.5° |
O3A | P2 | O2B | 117.0° | 109.5° |
O3A | P2 | C3B | 102.6° | 109.5° |
P2 | O3A | P1 | 133.6° | 134.0° |
O2B | P2 | C3B | 107.6° | 109.5° |
P2 | O2B | H2 | 109.5° | 114.0° |
P2 | C3B | F2B | 105.0° | 109.5° |
P2 | C3B | P3 | 113.4° | 109.5° |
P2 | C3B | H3 | 108.2° | 109.5° |
O3A | P1 | O2A | 112.2° | 109.5° |
O3A | P1 | O1A | 106.5° | 109.5° |
F2B | C3B | P3 | 106.6° | 109.5° |
F2B | C3B | H3 | 115.5° | 109.4° |
C3B | P3 | O3G | 102.5° | 109.4° |
C3B | P3 | O1G | 105.8° | 109.5° |
C3B | P3 | O2G | 109.9° | 109.5° |
P3 | C3B | H3 | 108.2° | 109.5° |
O2A | P1 | O1A | 117.6° | 109.4° |
P1 | O1A | H1 | 109.5° | 114.0° |
O3G | P3 | O1G | 110.0° | 109.5° |
O3G | P3 | O2G | 107.7° | 109.5° |
O1G | P3 | O2G | 119.6° | 109.5° |
P3 | O1G | H4 | 109.5° | 114.0° |
P3 | O2G | H5 | 109.5° | 114.0° |
H6 | C5' | H7 | 109.5° | 109.4° |
H10 | N2 | H11 | 120.0° | 120.0° |
H14 | C2' | H15 | 109.4° | 110.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N2 | C2 | N1 | N3 | 175.4° | 179.9° |
N2 | C2 | N1 | C6 | 175.0° | 180.0° |
N2 | C2 | N3 | C4 | 175.5° | 180.0° |
C2 | N2 | H10 | H11 | 180.0° | 180.0° |
N2 | C2 | N1 | H12 | 5.0° | 0.0° |
C2 | N1 | C6 | H12 | 180.0° | 180.0° |
N1 | C2 | N3 | C4 | 0.2° | 0.1° |
C2 | N1 | C6 | O6 | 177.0° | 180.0° |
C2 | N1 | C6 | C5 | 0.6° | 0.0° |
N1 | C2 | N2 | H10 | 175.6° | 0.0° |
N1 | C2 | N2 | H11 | 4.4° | 180.0° |
N3 | C2 | N1 | C6 | 0.4° | 0.1° |
C2 | N3 | C4 | C5 | 0.6° | 0.0° |
C2 | N3 | C4 | N9 | 179.3° | 180.0° |
N3 | C2 | N2 | H10 | 0.0° | 179.9° |
N3 | C2 | N2 | H11 | 180.0° | 0.1° |
N3 | C2 | N1 | H12 | 179.6° | 179.9° |
N1 | C6 | O6 | C5 | 176.0° | 180.0° |
N1 | C6 | C5 | C4 | 0.2° | 0.0° |
N1 | C6 | C5 | N7 | 179.6° | 179.9° |
N3 | C4 | C5 | C6 | 0.4° | 0.0° |
N3 | C4 | C5 | N9 | 179.9° | 180.0° |
N3 | C4 | C5 | N7 | 179.8° | 180.0° |
N3 | C4 | N9 | C1' | 4.1° | 0.1° |
N3 | C4 | N9 | C8 | 179.4° | 179.7° |
O6 | C6 | C5 | C4 | 176.5° | 180.0° |
O6 | C6 | C5 | N7 | 3.3° | 0.1° |
O6 | C6 | N1 | H12 | 3.0° | 0.0° |
C6 | C5 | C4 | N7 | 179.9° | 179.9° |
C6 | C5 | C4 | N9 | 179.6° | 179.9° |
C6 | C5 | N7 | C8 | 178.8° | 179.7° |
C5 | C6 | N1 | H12 | 179.4° | 180.0° |
C5 | C4 | N9 | C1' | 175.8° | 180.0° |
C5 | C4 | N9 | C8 | 0.6° | 0.3° |
C4 | C5 | N7 | C8 | 1.1° | 0.2° |
C4 | N9 | C1' | C2' | 93.0° | 86.0° |
N9 | C4 | C5 | N7 | 0.3° | 0.0° |
C4 | N9 | C1' | C8 | 174.1° | 179.8° |
C4 | N9 | C1' | O4' | 150.7° | 156.2° |
C4 | N9 | C8 | N7 | 1.4° | 0.4° |
C4 | N9 | C1' | H9 | 28.5° | 35.2° |
C4 | N9 | C8 | H13 | 178.7° | 179.8° |
C1' | C2' | C3' | H14 | 119.0° | 118.6° |
C1' | C2' | C3' | H15 | 118.9° | 118.8° |
C2' | C1' | N9 | O4' | 116.3° | 117.8° |
C2' | C1' | N9 | H9 | 121.5° | 121.2° |
C2' | C1' | O4' | H9 | 117.9° | 119.6° |
C2' | C1' | N9 | C8 | 81.1° | 94.3° |
C1' | C2' | C3' | O3' | 157.2° | 139.1° |
C1' | C2' | C3' | C4' | 38.9° | 20.7° |
C2' | C1' | O4' | C4' | 2.2° | 26.5° |
C1' | C2' | H14 | H15 | 123.1° | 122.6° |
C1' | C2' | C3' | H16 | 77.0° | 97.4° |
C3' | C2' | C1' | N9 | 95.2° | 121.6° |
C3' | C2' | C1' | O4' | 23.9° | 2.2° |
C2' | C3' | O3' | C4' | 111.5° | 112.8° |
C2' | C3' | O3' | H16 | 125.2° | 123.6° |
C2' | C3' | C4' | H16 | 115.8° | 118.0° |
C2' | C3' | C4' | O4' | 40.7° | 36.8° |
C2' | C3' | C4' | C5' | 158.1° | 155.4° |
C2' | C3' | C4' | H8 | 77.6° | 81.7° |
C3' | C2' | C1' | H9 | 142.8° | 117.3° |
C3' | C2' | H14 | H15 | 123.1° | 122.7° |
C2' | C3' | O3' | H17 | 145.2° | 61.4° |
C5 | N7 | C8 | N9 | 1.5° | 0.4° |
C5 | N7 | C8 | H13 | 178.5° | 179.8° |
N9 | C1' | O4' | H9 | 121.7° | 120.9° |
C1' | N9 | C8 | N7 | 176.4° | 179.8° |
N9 | C1' | O4' | C4' | 122.6° | 146.0° |
C1' | N9 | C8 | H13 | 3.6° | 0.0° |
N9 | C1' | C2' | H14 | 145.9° | 119.9° |
N9 | C1' | C2' | H15 | 23.7° | 2.8° |
O4' | C1' | N9 | C8 | 35.2° | 23.6° |
C1' | O4' | C4' | C3' | 27.6° | 40.0° |
C1' | O4' | C4' | C5' | 149.9° | 158.6° |
C1' | O4' | C4' | H8 | 89.7° | 78.6° |
O4' | C1' | C2' | H14 | 95.0° | 120.7° |
O4' | C1' | C2' | H15 | 142.8° | 116.6° |
N9 | C8 | N7 | H13 | 180.0° | 179.8° |
C8 | N9 | C1' | H9 | 157.3° | 144.5° |
O3' | C3' | C4' | H16 | 124.0° | 123.7° |
O3' | C3' | C4' | O4' | 160.8° | 155.1° |
O3' | C3' | C4' | C5' | 81.8° | 86.4° |
O3' | C3' | C4' | H8 | 42.6° | 36.5° |
O3' | C3' | C2' | H14 | 38.2° | 20.5° |
O3' | C3' | C2' | H15 | 83.9° | 102.1° |
C3' | C4' | O4' | C5' | 122.3° | 118.6° |
C3' | C4' | O4' | H8 | 117.3° | 118.6° |
C3' | C4' | C5' | H8 | 124.2° | 122.9° |
C3' | C4' | C5' | O5' | 54.7° | 177.2° |
C3' | C4' | C5' | H6 | 174.6° | 62.8° |
C3' | C4' | C5' | H7 | 65.2° | 57.1° |
C4' | C3' | C2' | H14 | 80.0° | 97.9° |
C4' | C3' | C2' | H15 | 157.8° | 139.4° |
C4' | C3' | O3' | H17 | 103.3° | 174.2° |
O4' | C4' | C5' | H8 | 121.0° | 122.8° |
O4' | C4' | C5' | O5' | 60.1° | 68.6° |
O4' | C4' | C5' | H6 | 59.8° | 51.4° |
O4' | C4' | C5' | H7 | 179.9° | 171.4° |
C4' | O4' | C1' | H9 | 115.7° | 93.1° |
O4' | C4' | C3' | H16 | 75.2° | 81.2° |
C4' | C5' | O5' | H6 | 119.9° | 120.0° |
C4' | C5' | O5' | H7 | 119.9° | 120.0° |
C4' | C5' | O5' | P1 | 133.0° | 180.0° |
C4' | C5' | H6 | H7 | 120.2° | 120.0° |
C5' | C4' | C3' | H16 | 42.2° | 37.3° |
O1B | P2 | O3A | O2B | 136.4° | 119.9° |
O1B | P2 | O3A | C3B | 106.1° | 120.1° |
O1B | P2 | O2B | C3B | 112.2° | 120.0° |
O1B | P2 | O3A | P1 | 146.7° | 60.0° |
O1B | P2 | C3B | F2B | 93.9° | 180.0° |
O1B | P2 | C3B | P3 | 150.1° | 59.9° |
O1B | P2 | O2B | H2 | 0.0° | 180.0° |
O1B | P2 | C3B | H3 | 30.0° | 60.1° |
C5' | O5' | P1 | O3A | 69.4° | 175.0° |
C5' | O5' | P1 | O2A | 171.4° | 55.0° |
C5' | O5' | P1 | O1A | 43.6° | 65.0° |
O5' | C5' | H6 | H7 | 120.3° | 120.0° |
O5' | C5' | C4' | H8 | 178.9° | 54.2° |
O5' | P1 | O3A | P2 | 104.4° | 165.0° |
O5' | P1 | O3A | O2A | 115.8° | 120.0° |
O5' | P1 | O3A | O1A | 114.2° | 120.0° |
O5' | P1 | O2A | O1A | 122.2° | 120.0° |
O5' | P1 | O1A | H1 | 121.7° | 60.0° |
P1 | O5' | C5' | H6 | 107.1° | 60.0° |
P1 | O5' | C5' | H7 | 13.1° | 59.9° |
O3A | P2 | O2B | C3B | 114.7° | 120.0° |
O3A | P2 | C3B | F2B | 19.1° | 59.9° |
O3A | P2 | C3B | P3 | 96.9° | 180.0° |
P2 | O3A | P1 | O2A | 139.8° | 45.0° |
P2 | O3A | P1 | O1A | 9.8° | 75.0° |
O3A | P2 | O2B | H2 | 133.1° | 60.0° |
O3A | P2 | C3B | H3 | 143.0° | 60.0° |
O2B | P2 | O3A | P1 | 10.3° | 60.0° |
O2B | P2 | C3B | F2B | 143.1° | 60.1° |
O2B | P2 | C3B | P3 | 27.1° | 60.0° |
O2B | P2 | C3B | H3 | 93.0° | 180.0° |
C3B | P2 | O3A | P1 | 107.2° | 180.0° |
P2 | C3B | F2B | P3 | 120.6° | 120.1° |
P2 | C3B | F2B | H3 | 119.1° | 120.0° |
P2 | C3B | P3 | H3 | 120.1° | 120.0° |
P2 | C3B | P3 | O3G | 90.0° | 60.0° |
P2 | C3B | P3 | O1G | 25.2° | 60.0° |
P2 | C3B | P3 | O2G | 155.7° | 180.0° |
C3B | P2 | O2B | H2 | 112.2° | 60.0° |
O3A | P1 | O2A | O1A | 124.0° | 120.0° |
O3A | P1 | O1A | H1 | 126.8° | 60.0° |
F2B | C3B | P3 | H3 | 124.8° | 119.9° |
F2B | C3B | P3 | O3G | 154.9° | 60.0° |
F2B | C3B | P3 | O1G | 89.8° | 180.0° |
F2B | C3B | P3 | O2G | 40.6° | 60.0° |
C3B | P3 | O3G | O1G | 112.2° | 120.0° |
C3B | P3 | O3G | O2G | 115.9° | 120.0° |
C3B | P3 | O1G | O2G | 124.7° | 120.0° |
C3B | P3 | O1G | H4 | 110.0° | 60.0° |
C3B | P3 | O2G | H5 | 110.9° | 179.9° |
O2A | P1 | O1A | H1 | 0.0° | 180.0° |
O3G | P3 | O1G | O2G | 125.4° | 120.0° |
O3G | P3 | C3B | H3 | 30.1° | 180.0° |
O3G | P3 | O1G | H4 | 0.0° | 179.9° |
O3G | P3 | O2G | H5 | 0.0° | 60.0° |
O1G | P3 | C3B | H3 | 145.3° | 60.0° |
O1G | P3 | O2G | H5 | 126.5° | 60.1° |
O2G | P3 | C3B | H3 | 84.2° | 60.0° |
O2G | P3 | O1G | H4 | 125.4° | 60.0° |
H6 | C5' | C4' | H8 | 61.2° | 174.3° |
H7 | C5' | C4' | H8 | 58.9° | 65.8° |
H8 | C4' | C3' | H16 | 166.6° | 160.3° |
H9 | C1' | C2' | H14 | 23.9° | 1.2° |
H9 | C1' | C2' | H15 | 98.2° | 123.8° |
H14 | C2' | C3' | H16 | 164.1° | 144.1° |
H15 | C2' | C3' | H16 | 41.9° | 21.4° |
H16 | C3' | O3' | H17 | 20.0° | 62.1° |