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SummaryGeometryRelated PDB entries

F9Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
NAACABtrip1.14Å1.14Å
CABCACsing1.43Å1.47Å
CACCADdoub1.40Å1.39ÅAromatic
CACCAHsing1.39Å1.39ÅAromatic
CADCAEsing1.36Å1.39ÅAromatic
CAHCAGdoub1.39Å1.33ÅAromatic
CAECAFdoub1.40Å1.33ÅAromatic
CAGCAFsing1.41Å1.33ÅAromatic
CAGNAIsing1.38Å1.33ÅAromatic
CAFCAKsing1.46Å1.34ÅAromatic
NAICAJsing1.37Å1.33ÅAromatic
CAKCAJdoub1.34Å1.33ÅAromatic
CADHADsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAJHAJsing1.08Å1.08Å
CAKHAKsing1.08Å1.08Å
NAIHAIsing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
NAACABCAC179.4°180.0°
CABCACCAD119.6°119.8°
CABCACCAH122.0°119.9°
CADCACCAH118.4°120.3°
CACCADCAE118.4°120.3°
CACCADHAD120.8°119.8°
CACCAHCAG120.3°119.7°
CACCAHHAH119.9°120.1°
CADCAECAF120.6°120.0°
CAECADHAD120.8°119.8°
CADCAEHAE119.7°120.0°
CAHCAGCAF121.4°119.5°
CAHCAGNAI131.6°133.4°
CAGCAHHAH119.8°120.2°
CAECAFCAG120.8°120.2°
CAECAFCAK130.9°133.8°
CAFCAEHAE119.7°120.0°
CAFCAGNAI107.0°107.1°
CAGCAFCAK108.2°106.0°
CAGNAICAJ109.3°109.9°
CAGNAIHAI125.4°125.1°
CAFCAKCAJ108.2°107.0°
CAFCAKHAK125.9°126.5°
NAICAJCAK107.3°110.0°
NAICAJHAJ126.3°125.0°
CAJNAIHAI125.3°125.1°
CAKCAJHAJ126.3°125.0°
CAJCAKHAK125.9°126.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NAACABCACCAD1.0°0.0°
NAACABCACCAH178.8°179.8°
CABCACCADCAH179.8°179.7°
CABCACCADCAE179.8°180.0°
CABCACCAHCAG179.9°179.8°
CABCACCADHAD0.2°0.0°
CABCACCAHHAH0.1°0.0°
CACCADCAEHAD180.0°180.0°
CADCACCAHCAG0.3°0.5°
CACCADCAECAF0.4°0.0°
CACCADCAEHAE179.6°180.0°
CADCACCAHHAH179.7°179.7°
CAHCACCADCAE0.5°0.2°
CACCAHCAGHAH180.0°179.8°
CACCAHCAGCAF0.1°0.5°
CACCAHCAGNAI179.9°179.8°
CAHCACCADHAD179.6°179.8°
CADCAECAFHAE180.0°179.9°
CADCAECAFCAG0.1°0.0°
CADCAECAFCAK179.9°180.0°
CAHCAGCAFCAE0.0°0.2°
CAHCAGCAFNAI180.0°179.7°
CAHCAGCAFCAK180.0°179.8°
CAHCAGNAICAJ179.6°179.7°
CAHCAGNAIHAI0.4°0.3°
CAECAFCAGCAK180.0°180.0°
CAECAFCAGNAI180.0°180.0°
CAECAFCAKCAJ179.6°180.0°
CAFCAECADHAD179.6°180.0°
CAECAFCAKHAK0.4°0.1°
CAFCAGNAICAJ0.3°0.0°
CAGCAFCAKCAJ0.4°0.0°
CAGCAFCAEHAE179.8°180.0°
CAFCAGCAHHAH179.9°179.7°
CAGCAFCAKHAK179.6°180.0°
CAFCAGNAIHAI179.6°180.0°
NAICAGCAFCAK0.0°0.0°
CAGNAICAJHAI180.0°180.0°
CAGNAICAJCAK0.6°0.0°
NAICAGCAHHAH0.2°0.1°
CAGNAICAJHAJ179.4°179.9°
CAFCAKCAJNAI0.6°0.0°
CAFCAKCAJHAK180.0°180.0°
CAKCAFCAEHAE0.1°0.1°
CAFCAKCAJHAJ179.4°180.0°
NAICAJCAKHAJ180.0°180.0°
NAICAJCAKHAK179.4°180.0°
CAKCAJNAIHAI179.4°180.0°
HADCADCAEHAE0.4°0.0°
HAJCAJCAKHAK0.6°0.0°
HAJCAJNAIHAI0.6°0.1°

218500

PDB entries from 2024-04-17

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