Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

F3H

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OP3Pdoub1.48Å1.57Å
OP1Psing1.61Å1.61Å
PO5'sing1.61Å1.57Å
POP2sing1.61Å1.59Å
C1'N1sing1.47Å1.47Å
N1C6sing1.37Å1.36Å
N1C2sing1.35Å1.39Å
C2O2doub1.22Å1.32Å
C2N3sing1.35Å1.34Å
N3C4sing1.35Å1.36Å
N3HN3sing0.97Å1.00Å
C5C4sing1.42Å1.41Å
C4O4doub1.22Å1.30Å
C6C5doub1.35Å1.38Å
C5C5Msing1.51Å1.51Å
C6H6sing1.08Å1.08Å
C6'C1'sing1.53Å1.51Å
C1'C2'sing1.53Å1.52Å
C1'H1'sing1.09Å1.10Å
F2'C2'sing1.40Å1.36Å
C3'C2'sing1.53Å1.53Å
C2'H2'sing1.09Å1.10Å
C4'C3'sing1.53Å1.54Å
C3'O3'sing1.43Å1.44Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C5'C4'sing1.53Å1.51Å
C4'O4'sing1.43Å1.43Å
C4'H4'sing1.09Å1.10Å
O4'C6'sing1.43Å1.41Å
C5'O5'sing1.43Å1.40Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C5MH5Msing1.09Å1.10Å
C5MH5MAsing1.09Å1.10Å
C5MH5MBsing1.09Å1.10Å
C6'H6'sing1.09Å1.10Å
C6'H6'Asing1.09Å1.10Å
OP1HOP1sing0.97Å0.95Å
OP2HOP2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OP3POP1106.2°109.5°
OP3PO5'108.1°109.4°
OP3POP2110.5°109.5°
OP1PO5'107.9°109.5°
OP1POP2115.3°109.5°
POP1HOP1109.5°114.0°
O5'POP2108.6°109.4°
PO5'C5'118.6°123.1°
POP2HOP2109.5°114.0°
C1'N1C6122.3°119.7°
C1'N1C2116.4°119.6°
N1C1'C6'115.1°109.5°
N1C1'C2'111.1°109.5°
N1C1'H1'104.5°109.5°
C6N1C2121.1°120.6°
N1C6C5120.6°119.7°
N1C6H6119.7°120.2°
N1C2O2122.8°119.6°
N1C2N3119.2°120.9°
O2C2N3118.0°119.5°
C2N3C4120.6°120.3°
C2N3HN3119.7°119.8°
C4N3HN3119.7°119.9°
N3C4C5121.6°119.4°
N3C4O4116.9°120.3°
C5C4O4121.5°120.3°
C4C5C6116.9°119.1°
C4C5C5M120.7°120.5°
C6C5C5M122.5°120.4°
C5C6H6119.7°120.1°
C5C5MH5M109.5°109.5°
C5C5MH5MA109.5°109.5°
C5C5MH5MB109.5°109.5°
C6'C1'C2'110.1°109.2°
C6'C1'H1'105.6°109.5°
C1'C6'O4'108.1°109.4°
C1'C6'H6'109.9°109.5°
C1'C6'H6'A109.9°109.5°
C2'C1'H1'110.1°109.6°
C1'C2'F2'105.9°109.5°
C1'C2'C3'111.4°109.0°
C1'C2'H2'110.1°109.5°
F2'C2'C3'108.0°109.6°
F2'C2'H2'113.3°109.6°
C3'C2'H2'108.1°109.6°
C2'C3'C4'109.8°109.2°
C2'C3'O3'108.3°109.5°
C2'C3'H3'110.0°109.5°
C4'C3'O3'109.4°109.5°
C4'C3'H3'108.9°109.6°
C3'C4'C5'109.6°109.5°
C3'C4'O4'107.2°109.4°
C3'C4'H4'110.4°109.5°
O3'C3'H3'110.4°109.5°
C3'O3'HO3'109.5°114.0°
C5'C4'O4'108.3°109.5°
C5'C4'H4'109.4°109.5°
C4'C5'O5'108.0°109.5°
C4'C5'H5'110.0°109.4°
C4'C5'H5'A110.0°109.5°
O4'C4'H4'111.8°109.5°
C4'O4'C6'114.9°114.1°
O4'C6'H6'109.9°109.4°
O4'C6'H6'A109.9°109.5°
O5'C5'H5'110.0°109.5°
O5'C5'H5'A110.0°109.5°
H5'C5'H5'A108.9°109.5°
H5MC5MH5MA109.4°109.4°
H5MC5MH5MB109.5°109.5°
H5MAC5MH5MB109.5°109.4°
H6'C6'H6'A109.0°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OP3POP1O5'115.6°120.0°
OP3POP1OP2122.7°120.0°
OP3PO5'OP2119.9°119.9°
OP3PO5'C5'69.1°54.9°
OP3POP1HOP10.0°60.0°
OP3POP2HOP20.0°180.0°
OP1PO5'OP2125.7°120.0°
OP1PO5'C5'45.3°175.0°
OP1POP2HOP2120.4°59.9°
PO5'C5'C4'160.0°180.0°
PO5'C5'H5'40.0°60.1°
PO5'C5'H5'A80.0°60.0°
O5'POP1HOP1115.6°180.0°
O5'POP2HOP2118.4°60.1°
OP2PO5'C5'171.0°65.0°
OP2POP1HOP1122.8°60.0°
C1'N1C6C2175.8°179.7°
C1'N1C2O21.8°0.3°
C1'N1C2N3177.4°179.8°
C1'N1C6C5175.2°179.8°
C1'N1C6H64.7°0.3°
N1C1'C6'C2'126.5°119.9°
N1C1'C6'H1'114.7°120.1°
N1C1'C2'H1'115.3°120.2°
N1C1'C2'F2'166.9°177.2°
N1C1'C2'C3'75.9°62.9°
N1C1'C2'H2'44.0°57.0°
N1C1'C6'O4'69.8°62.3°
N1C1'C6'H6'50.3°57.6°
N1C1'C6'H6'A170.3°177.7°
C6N1C2O2177.8°180.0°
C6N1C2N31.4°0.0°
N1C6C5C42.7°0.1°
N1C6C5H6180.0°180.0°
N1C6C5C5M177.4°180.0°
C6N1C1'C6'46.7°3.3°
C6N1C1'C2'79.3°116.4°
C6N1C1'H1'162.1°123.4°
N1C2O2N3179.2°179.9°
N1C2N3C40.9°0.1°
N1C2N3HN3179.1°180.0°
C2N1C6C50.5°0.0°
C2N1C6H6179.5°180.0°
C2N1C1'C6'137.3°176.5°
C2N1C1'C2'96.7°63.9°
C2N1C1'H1'22.0°56.3°
O2C2N3C4178.3°180.0°
O2C2N3HN31.7°0.1°
C2N3C4HN3180.0°179.9°
C2N3C4C51.3°0.1°
C2N3C4O4179.2°179.9°
N3C4C5O4177.8°180.0°
N3C4C5C63.1°0.1°
N3C4C5C5M176.9°180.0°
HN3N3C4C5178.7°180.0°
HN3N3C4O40.8°0.0°
C4C5C6C5M180.0°179.9°
C4C5C6H6177.4°179.9°
C4C5C5MH5M180.0°0.0°
C4C5C5MH5MA60.0°120.0°
C4C5C5MH5MB60.0°120.1°
O4C4C5C6179.1°179.9°
O4C4C5C5M0.8°0.0°
C6C5C5MH5M0.0°180.0°
C6C5C5MH5MA120.0°59.9°
C6C5C5MH5MB120.0°60.0°
C5MC5C6H62.6°0.0°
C5C5MH5MH5MA120.0°120.1°
C5C5MH5MH5MB120.0°120.0°
C5C5MH5MAH5MB120.0°120.0°
C6'C1'C2'H1'116.0°120.0°
C6'C1'C2'F2'64.4°63.0°
C6'C1'C2'C3'52.8°57.0°
C6'C1'C2'H2'172.7°176.9°
C1'C6'O4'C4'65.6°61.2°
C1'C6'O4'H6'120.0°120.0°
C1'C6'O4'H6'A120.0°120.0°
C1'C6'H6'H6'A120.6°120.1°
C1'C2'F2'C3'119.4°119.6°
C1'C2'F2'H2'120.8°120.1°
C1'C2'C3'H2'121.1°119.8°
C1'C2'C3'C4'52.2°57.0°
C1'C2'C3'O3'171.6°176.9°
C1'C2'C3'H3'67.6°63.0°
C2'C1'C6'O4'56.7°57.6°
C2'C1'C6'H6'176.7°177.5°
C2'C1'C6'H6'A63.3°62.4°
H1'C1'C2'F2'51.6°57.0°
H1'C1'C2'C3'168.8°176.9°
H1'C1'C2'H2'71.3°63.2°
H1'C1'C6'O4'175.5°177.6°
H1'C1'C6'H6'64.5°62.5°
H1'C1'C6'H6'A55.5°57.6°
F2'C2'C3'H2'123.0°120.3°
F2'C2'C3'C4'63.7°62.9°
F2'C2'C3'O3'55.8°57.0°
F2'C2'C3'H3'176.5°177.1°
C2'C3'C4'O3'118.8°119.9°
C2'C3'C4'H3'120.5°119.9°
C2'C3'O3'H3'120.5°120.1°
C2'C3'O3'HO3'180.0°60.0°
C2'C3'C4'C5'172.2°177.6°
C2'C3'C4'O4'54.9°57.6°
C2'C3'C4'H4'67.1°62.4°
H2'C2'C3'C4'173.3°176.8°
H2'C2'C3'O3'67.2°63.3°
H2'C2'C3'H3'53.5°56.9°
C4'C3'O3'H3'119.8°120.2°
C4'C3'O3'HO3'60.3°179.7°
C3'C4'C5'O4'116.7°119.9°
C3'C4'C5'H4'121.3°120.0°
C3'C4'O4'H4'121.2°120.0°
C3'C4'O4'C6'64.6°61.2°
C3'C4'C5'O5'55.8°175.0°
C3'C4'C5'H5'175.9°55.0°
C3'C4'C5'H5'A64.2°65.0°
O3'C3'C4'C5'69.0°62.5°
O3'C3'C4'O4'173.7°177.5°
O3'C3'C4'H4'51.6°57.5°
H3'C3'O3'HO3'59.5°60.1°
H3'C3'C4'C5'51.7°57.7°
H3'C3'C4'O4'65.6°62.3°
H3'C3'C4'H4'172.4°177.7°
C5'C4'O4'H4'120.6°120.1°
C5'C4'O4'C6'177.2°178.9°
C4'C5'O5'H5'120.0°120.0°
C4'C5'O5'H5'A120.0°120.0°
C4'C5'H5'H5'A120.6°120.0°
O4'C4'C5'O5'60.8°65.1°
O4'C4'C5'H5'59.2°174.9°
O4'C4'C5'H5'A179.2°54.9°
C4'O4'C6'H6'174.3°178.8°
C4'O4'C6'H6'A54.4°58.9°
H4'C4'O4'C6'56.6°58.8°
H4'C4'C5'O5'177.1°55.0°
H4'C4'C5'H5'62.9°65.0°
H4'C4'C5'H5'A57.1°175.0°
O4'C6'H6'H6'A120.5°120.0°
O5'C5'H5'H5'A120.6°120.0°
H5MC5MH5MAH5MB120.0°119.9°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon