F2A
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O5' | PA | sing | 1.61Å | 1.59Å | |
| PA | C3A | sing | 1.82Å | 1.88Å | |
| PA | O2A | doub | 1.48Å | 1.48Å | |
| PA | O1A | sing | 1.61Å | 1.49Å | |
| O1A | HO1A | sing | 0.97Å | 0.95Å | |
| PB | C3A | sing | 1.82Å | 1.87Å | |
| C3A | H3A | sing | 1.09Å | 1.10Å | |
| C3A | H3AA | sing | 1.09Å | 1.10Å | |
| C5' | O5' | sing | 1.43Å | 1.42Å | |
| O1B | PB | doub | 1.48Å | 1.49Å | |
| PB | O2B | sing | 1.61Å | 1.49Å | |
| PB | O3B | sing | 1.61Å | 1.50Å | |
| O2B | HO2B | sing | 0.97Å | 0.95Å | |
| O3B | PG | sing | 1.61Å | 1.49Å | |
| PG | O1G | doub | 1.48Å | 1.48Å | |
| PG | O3G | sing | 1.61Å | 1.49Å | |
| PG | O2G | sing | 1.61Å | 1.49Å | |
| O2G | HO2G | sing | 0.97Å | 0.95Å | |
| O3G | HO3G | sing | 0.97Å | 0.95Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| C3' | C4' | sing | 1.55Å | 1.51Å | |
| O4' | C4' | sing | 1.44Å | 1.45Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C1' | O4' | sing | 1.44Å | 1.42Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C1' | N9 | sing | 1.47Å | 1.47Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C4 | N9 | sing | 1.37Å | 1.38Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
| N3 | C4 | doub | 1.33Å | 1.34Å | Aromatic |
| C4 | C5 | sing | 1.40Å | 1.39Å | Aromatic |
| C2 | N3 | sing | 1.32Å | 1.33Å | Aromatic |
| C2 | N1 | doub | 1.32Å | 1.34Å | Aromatic |
| C2 | H2 | sing | 1.08Å | 1.08Å | |
| N1 | C6 | sing | 1.33Å | 1.35Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.34Å | |
| C6 | C5 | doub | 1.40Å | 1.40Å | Aromatic |
| N6 | HN6 | sing | 0.97Å | 1.00Å | |
| N6 | HN6A | sing | 0.97Å | 1.00Å | |
| C5 | N7 | sing | 1.35Å | 1.39Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C2' | C3' | sing | 1.55Å | 1.52Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'A | sing | 1.09Å | 1.10Å | |
| O3' | C3' | sing | 1.43Å | 1.42Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O5' | PA | C3A | 113.9° | 109.5° |
| O5' | PA | O2A | 106.4° | 109.5° |
| O5' | PA | O1A | 108.7° | 109.5° |
| PA | O5' | C5' | 121.5° | 123.0° |
| C3A | PA | O2A | 105.2° | 109.5° |
| C3A | PA | O1A | 103.4° | 109.4° |
| PA | C3A | PB | 129.9° | 109.5° |
| PA | C3A | H3A | 103.2° | 109.4° |
| PA | C3A | H3AA | 98.4° | 109.5° |
| O2A | PA | O1A | 119.5° | 109.5° |
| PA | O1A | HO1A | 109.5° | 114.0° |
| PB | C3A | H3A | 103.2° | 109.5° |
| PB | C3A | H3AA | 98.4° | 109.5° |
| C3A | PB | O1B | 106.0° | 109.5° |
| C3A | PB | O2B | 106.8° | 109.5° |
| C3A | PB | O3B | 106.6° | 109.5° |
| H3A | C3A | H3AA | 127.3° | 109.4° |
| O5' | C5' | C4' | 110.4° | 109.5° |
| O5' | C5' | H5' | 109.2° | 109.5° |
| O5' | C5' | H5'A | 109.0° | 109.5° |
| O1B | PB | O2B | 119.7° | 109.5° |
| O1B | PB | O3B | 108.2° | 109.5° |
| O2B | PB | O3B | 108.9° | 109.4° |
| PB | O2B | HO2B | 109.5° | 114.1° |
| PB | O3B | PG | 120.2° | 134.0° |
| O3B | PG | O1G | 104.7° | 109.5° |
| O3B | PG | O3G | 108.4° | 109.5° |
| O3B | PG | O2G | 109.8° | 109.5° |
| O1G | PG | O3G | 108.1° | 109.5° |
| O1G | PG | O2G | 119.7° | 109.5° |
| O3G | PG | O2G | 105.8° | 109.5° |
| PG | O3G | HO3G | 109.5° | 114.0° |
| PG | O2G | HO2G | 109.5° | 114.0° |
| C4' | C5' | H5' | 109.1° | 109.5° |
| C4' | C5' | H5'A | 109.0° | 109.4° |
| C5' | C4' | C3' | 114.9° | 110.7° |
| C5' | C4' | O4' | 110.3° | 110.6° |
| C5' | C4' | H4' | 103.3° | 110.6° |
| H5' | C5' | H5'A | 110.2° | 109.5° |
| C3' | C4' | O4' | 103.2° | 103.6° |
| C3' | C4' | H4' | 110.4° | 110.6° |
| C4' | C3' | C2' | 101.7° | 102.0° |
| C4' | C3' | O3' | 109.7° | 111.1° |
| C4' | C3' | H3' | 114.9° | 110.7° |
| O4' | C4' | H4' | 115.0° | 110.6° |
| C4' | O4' | C1' | 109.5° | 107.0° |
| O4' | C1' | C2' | 107.0° | 107.3° |
| O4' | C1' | N9 | 109.1° | 109.9° |
| O4' | C1' | H1' | 112.5° | 109.9° |
| C2' | C1' | N9 | 112.7° | 109.9° |
| C2' | C1' | H1' | 108.9° | 110.0° |
| C1' | C2' | C3' | 101.3° | 104.3° |
| C1' | C2' | H2' | 112.3° | 110.5° |
| C1' | C2' | H2'A | 114.0° | 110.5° |
| N9 | C1' | H1' | 106.8° | 109.8° |
| C1' | N9 | C4 | 126.0° | 126.3° |
| C1' | N9 | C8 | 128.4° | 126.2° |
| C4 | N9 | C8 | 105.6° | 107.5° |
| N9 | C4 | N3 | 127.4° | 134.9° |
| N9 | C4 | C5 | 105.9° | 106.0° |
| N9 | C8 | N7 | 113.8° | 109.9° |
| N9 | C8 | H8 | 123.1° | 125.0° |
| N3 | C4 | C5 | 126.7° | 119.1° |
| C4 | N3 | C2 | 110.7° | 120.6° |
| C4 | C5 | C6 | 117.0° | 118.1° |
| C4 | C5 | N7 | 110.8° | 107.2° |
| N3 | C2 | N1 | 129.3° | 122.5° |
| N3 | C2 | H2 | 115.3° | 118.7° |
| N1 | C2 | H2 | 115.3° | 118.8° |
| C2 | N1 | C6 | 118.6° | 121.2° |
| N1 | C6 | N6 | 118.6° | 120.7° |
| N1 | C6 | C5 | 117.7° | 118.5° |
| N6 | C6 | C5 | 123.7° | 120.8° |
| C6 | N6 | HN6 | 109.5° | 120.0° |
| C6 | N6 | HN6A | 109.5° | 120.0° |
| C6 | C5 | N7 | 132.2° | 134.7° |
| HN6 | N6 | HN6A | 109.5° | 120.0° |
| C5 | N7 | C8 | 103.8° | 109.5° |
| N7 | C8 | H8 | 123.1° | 125.1° |
| C3' | C2' | H2' | 112.3° | 110.3° |
| C3' | C2' | H2'A | 114.0° | 110.5° |
| C2' | C3' | O3' | 111.4° | 110.9° |
| C2' | C3' | H3' | 113.3° | 110.9° |
| H2' | C2' | H2'A | 103.3° | 110.6° |
| O3' | C3' | H3' | 105.9° | 110.9° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O5' | PA | C3A | O2A | 116.1° | 120.0° |
| O5' | PA | C3A | O1A | 117.8° | 120.0° |
| O5' | PA | O2A | O1A | 123.4° | 120.0° |
| O5' | PA | O1A | HO1A | 152.8° | 59.9° |
| O5' | PA | C3A | PB | 50.5° | 180.0° |
| O5' | PA | C3A | H3A | 69.5° | 60.0° |
| O5' | PA | C3A | H3AA | 158.9° | 60.0° |
| PA | O5' | C5' | C4' | 161.2° | 180.0° |
| PA | O5' | C5' | H5' | 41.2° | 60.0° |
| PA | O5' | C5' | H5'A | 79.2° | 60.0° |
| C3A | PA | O2A | O1A | 115.4° | 120.0° |
| C3A | PA | O1A | HO1A | 85.8° | 60.1° |
| PA | C3A | PB | H3A | 120.0° | 120.0° |
| PA | C3A | PB | H3AA | 108.4° | 120.0° |
| PA | C3A | H3A | H3AA | 111.5° | 119.9° |
| C3A | PA | O5' | C5' | 61.4° | 175.0° |
| PA | C3A | PB | O1B | 84.9° | 60.0° |
| PA | C3A | PB | O2B | 43.8° | 60.0° |
| PA | C3A | PB | O3B | 160.1° | 180.0° |
| O2A | PA | O1A | HO1A | 30.5° | 180.0° |
| O2A | PA | C3A | PB | 166.7° | 60.0° |
| O2A | PA | C3A | H3A | 46.6° | 180.0° |
| O2A | PA | C3A | H3AA | 85.0° | 60.1° |
| O2A | PA | O5' | C5' | 176.8° | 55.0° |
| O1A | PA | C3A | PB | 67.3° | 60.0° |
| O1A | PA | C3A | H3A | 172.7° | 60.0° |
| O1A | PA | C3A | H3AA | 41.1° | 179.9° |
| O1A | PA | O5' | C5' | 53.3° | 65.0° |
| PB | C3A | H3A | H3AA | 111.5° | 120.1° |
| C3A | PB | O1B | O2B | 120.6° | 120.0° |
| C3A | PB | O1B | O3B | 113.9° | 120.0° |
| C3A | PB | O2B | O3B | 114.7° | 119.9° |
| C3A | PB | O2B | HO2B | 58.1° | 59.9° |
| C3A | PB | O3B | PG | 48.6° | 180.0° |
| H3A | C3A | PB | O1B | 35.2° | 60.0° |
| H3A | C3A | PB | O2B | 163.8° | 180.0° |
| H3A | C3A | PB | O3B | 79.9° | 60.1° |
| H3AA | C3A | PB | O1B | 166.7° | 180.0° |
| H3AA | C3A | PB | O2B | 64.6° | 60.0° |
| H3AA | C3A | PB | O3B | 51.7° | 60.0° |
| O5' | C5' | C4' | H5' | 120.0° | 120.0° |
| O5' | C5' | C4' | H5'A | 119.6° | 120.0° |
| O5' | C5' | H5' | H5'A | 119.7° | 120.0° |
| O5' | C5' | C4' | C3' | 77.6° | 177.2° |
| O5' | C5' | C4' | O4' | 38.6° | 68.6° |
| O5' | C5' | C4' | H4' | 162.0° | 54.3° |
| O1B | PB | O2B | O3B | 125.1° | 120.0° |
| O1B | PB | O2B | HO2B | 178.3° | 179.9° |
| O1B | PB | O3B | PG | 162.1° | 60.0° |
| O2B | PB | O3B | PG | 66.3° | 60.0° |
| O3B | PB | O2B | HO2B | 56.6° | 60.0° |
| PB | O3B | PG | O1G | 106.1° | 40.0° |
| PB | O3B | PG | O3G | 9.0° | 160.0° |
| PB | O3B | PG | O2G | 124.2° | 80.0° |
| O3B | PG | O1G | O3G | 115.4° | 120.0° |
| O3B | PG | O1G | O2G | 123.6° | 120.0° |
| O3B | PG | O3G | O2G | 117.7° | 120.0° |
| O3B | PG | O2G | HO2G | 19.0° | 60.0° |
| O3B | PG | O3G | HO3G | 171.5° | 180.0° |
| O1G | PG | O3G | O2G | 129.3° | 120.0° |
| O1G | PG | O2G | HO2G | 102.0° | 180.0° |
| O1G | PG | O3G | HO3G | 75.5° | 60.0° |
| O3G | PG | O2G | HO2G | 135.8° | 60.0° |
| O2G | PG | O3G | HO3G | 53.8° | 60.0° |
| C4' | C5' | H5' | H5'A | 119.6° | 120.0° |
| C5' | C4' | C3' | O4' | 120.2° | 118.6° |
| C5' | C4' | C3' | H4' | 116.4° | 122.9° |
| C5' | C4' | O4' | H4' | 116.3° | 122.9° |
| C5' | C4' | O4' | C1' | 148.9° | 158.6° |
| C5' | C4' | C3' | C2' | 160.2° | 155.4° |
| C5' | C4' | C3' | O3' | 81.7° | 86.4° |
| C5' | C4' | C3' | H3' | 37.4° | 37.3° |
| H5' | C5' | C4' | C3' | 42.4° | 62.8° |
| H5' | C5' | C4' | O4' | 158.6° | 51.4° |
| H5' | C5' | C4' | H4' | 78.0° | 174.3° |
| H5'A | C5' | C4' | C3' | 162.8° | 57.2° |
| H5'A | C5' | C4' | O4' | 81.0° | 171.4° |
| H5'A | C5' | C4' | H4' | 42.4° | 65.7° |
| C3' | C4' | O4' | H4' | 120.4° | 118.5° |
| C3' | C4' | O4' | C1' | 25.6° | 40.0° |
| C4' | C3' | C2' | C1' | 38.6° | 20.7° |
| C4' | C3' | C2' | O3' | 116.8° | 118.4° |
| C4' | C3' | C2' | H3' | 123.9° | 117.9° |
| C4' | C3' | C2' | H2' | 81.4° | 98.0° |
| C4' | C3' | C2' | H2'A | 161.5° | 139.4° |
| C4' | C3' | O3' | H3' | 124.5° | 123.6° |
| C4' | C3' | O3' | HO3' | 104.1° | 174.2° |
| C4' | O4' | C1' | C2' | 0.7° | 26.5° |
| C4' | O4' | C1' | N9 | 122.8° | 145.9° |
| C4' | O4' | C1' | H1' | 118.9° | 93.1° |
| O4' | C4' | C3' | C2' | 40.0° | 36.8° |
| O4' | C4' | C3' | O3' | 158.1° | 155.1° |
| O4' | C4' | C3' | H3' | 82.8° | 81.3° |
| H4' | C4' | O4' | C1' | 94.8° | 78.6° |
| H4' | C4' | C3' | C2' | 83.4° | 81.7° |
| H4' | C4' | C3' | O3' | 34.6° | 36.5° |
| H4' | C4' | C3' | H3' | 153.8° | 160.2° |
| O4' | C1' | C2' | N9 | 119.9° | 119.4° |
| O4' | C1' | C2' | H1' | 121.9° | 119.6° |
| O4' | C1' | N9 | H1' | 121.8° | 121.0° |
| O4' | C1' | N9 | C4 | 156.7° | 156.2° |
| O4' | C1' | N9 | C8 | 24.5° | 23.5° |
| O4' | C1' | C2' | C3' | 24.2° | 2.2° |
| O4' | C1' | C2' | H2' | 95.8° | 120.7° |
| O4' | C1' | C2' | H2'A | 147.1° | 116.6° |
| C2' | C1' | N9 | H1' | 119.5° | 121.1° |
| C2' | C1' | N9 | C4 | 84.7° | 86.0° |
| C2' | C1' | N9 | C8 | 94.2° | 94.3° |
| C1' | C2' | C3' | H2' | 120.0° | 118.7° |
| C1' | C2' | C3' | H2'A | 122.9° | 118.8° |
| C1' | C2' | H2' | H2'A | 123.4° | 122.7° |
| C1' | C2' | C3' | O3' | 155.5° | 139.1° |
| C1' | C2' | C3' | H3' | 85.3° | 97.3° |
| C1' | N9 | C4 | C8 | 179.1° | 179.7° |
| C1' | N9 | C4 | N3 | 1.2° | 0.1° |
| C1' | N9 | C4 | C5 | 178.4° | 180.0° |
| C1' | N9 | C8 | N7 | 178.4° | 179.9° |
| C1' | N9 | C8 | H8 | 1.7° | 0.0° |
| N9 | C1' | C2' | C3' | 95.6° | 121.6° |
| N9 | C1' | C2' | H2' | 144.4° | 119.9° |
| N9 | C1' | C2' | H2'A | 27.2° | 2.8° |
| H1' | C1' | N9 | C4 | 34.8° | 35.1° |
| H1' | C1' | N9 | C8 | 146.3° | 144.5° |
| H1' | C1' | C2' | C3' | 146.1° | 117.4° |
| H1' | C1' | C2' | H2' | 26.1° | 1.1° |
| H1' | C1' | C2' | H2'A | 91.0° | 123.8° |
| N9 | C4 | N3 | C5 | 179.5° | 179.9° |
| N9 | C4 | N3 | C2 | 179.2° | 180.0° |
| N9 | C4 | C5 | C6 | 179.5° | 180.0° |
| N9 | C4 | C5 | N7 | 0.4° | 0.0° |
| C4 | N9 | C8 | N7 | 0.7° | 0.4° |
| C4 | N9 | C8 | H8 | 179.3° | 179.8° |
| C8 | N9 | C4 | N3 | 179.8° | 179.8° |
| C8 | N9 | C4 | C5 | 0.6° | 0.2° |
| N9 | C8 | N7 | C5 | 0.4° | 0.4° |
| N9 | C8 | N7 | H8 | 180.0° | 179.9° |
| C4 | N3 | C2 | N1 | 0.0° | 0.0° |
| C4 | N3 | C2 | H2 | 180.0° | 180.0° |
| N3 | C4 | C5 | C6 | 0.1° | 0.0° |
| N3 | C4 | C5 | N7 | 180.0° | 180.0° |
| C5 | C4 | N3 | C2 | 0.3° | 0.1° |
| C4 | C5 | C6 | N1 | 0.3° | 0.0° |
| C4 | C5 | C6 | N6 | 179.6° | 180.0° |
| C4 | C5 | C6 | N7 | 179.9° | 180.0° |
| C4 | C5 | N7 | C8 | 0.0° | 0.2° |
| N3 | C2 | N1 | H2 | 180.0° | 180.0° |
| N3 | C2 | N1 | C6 | 0.4° | 0.0° |
| C2 | N1 | C6 | N6 | 179.4° | 180.0° |
| C2 | N1 | C6 | C5 | 0.5° | 0.0° |
| H2 | C2 | N1 | C6 | 179.6° | 180.0° |
| N1 | C6 | N6 | C5 | 179.9° | 180.0° |
| N1 | C6 | N6 | HN6 | 19.0° | 0.1° |
| N1 | C6 | N6 | HN6A | 101.1° | 180.0° |
| N1 | C6 | C5 | N7 | 179.6° | 180.0° |
| C6 | N6 | HN6 | HN6A | 120.1° | 179.9° |
| N6 | C6 | C5 | N7 | 0.5° | 0.0° |
| C5 | C6 | N6 | HN6 | 161.2° | 180.0° |
| C5 | C6 | N6 | HN6A | 78.8° | 0.0° |
| C6 | C5 | N7 | C8 | 179.9° | 179.8° |
| C5 | N7 | C8 | H8 | 179.6° | 179.8° |
| C3' | C2' | H2' | H2'A | 123.3° | 122.6° |
| C2' | C3' | O3' | H3' | 123.6° | 123.7° |
| C2' | C3' | O3' | HO3' | 7.7° | 61.5° |
| H2' | C2' | C3' | O3' | 35.5° | 20.4° |
| H2' | C2' | C3' | H3' | 154.7° | 144.1° |
| H2'A | C2' | C3' | O3' | 81.6° | 102.2° |
| H2'A | C2' | C3' | H3' | 37.6° | 21.5° |
| H3' | C3' | O3' | HO3' | 131.3° | 62.2° |
