Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

ED3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O30C24sing1.35Å1.39Å
O15C13doub1.22Å1.39Å
C24C14doub1.39Å1.41ÅAromatic
C24N25sing1.35Å1.31ÅAromatic
C12C6sing1.51Å1.54Å
C13C14sing1.47Å1.54Å
C13C1sing1.48Å1.54Å
C28N25sing1.46Å1.44Å
C14C27sing1.41Å1.43ÅAromatic
N25N26sing1.40Å1.31ÅAromatic
O11C10doub1.22Å1.39Å
C6C1doub1.39Å1.40ÅAromatic
C6C5sing1.39Å1.44ÅAromatic
C1C2sing1.40Å1.40ÅAromatic
N26C27doub1.30Å1.31ÅAromatic
C27C31sing1.51Å1.53Å
C10C5sing1.47Å1.43Å
C10N9sing1.35Å1.33Å
C5C4doub1.41Å1.36ÅAromatic
C22C23doub1.38Å1.39ÅAromatic
C22C21sing1.38Å1.39ÅAromatic
C23C16sing1.39Å1.39ÅAromatic
C2C3doub1.37Å1.40ÅAromatic
C21C20doub1.38Å1.38ÅAromatic
C16N9sing1.40Å1.46Å
C16C19doub1.39Å1.39ÅAromatic
N9C8sing1.34Å1.35Å
C4C3sing1.39Å1.44ÅAromatic
C4N7sing1.38Å1.37Å
C20C19sing1.38Å1.39ÅAromatic
C19CL1sing1.74Å1.77Å
C8N7sing1.34Å1.34Å
C8O17doub1.22Å1.19Å
N7C18sing1.46Å1.45Å
C2H1sing1.08Å1.08Å
C3H2sing1.08Å1.08Å
C12H3sing1.09Å1.10Å
C12H4sing1.09Å1.10Å
C12H5sing1.09Å1.10Å
C18H8sing1.09Å1.10Å
C18H9sing1.09Å1.10Å
C18H10sing1.09Å1.10Å
C28H11sing1.09Å1.10Å
C28H12sing1.09Å1.10Å
C28H13sing1.09Å1.10Å
C31H14sing1.09Å1.10Å
C31H15sing1.09Å1.10Å
C31H16sing1.09Å1.10Å
C20H18sing1.08Å1.08Å
C21H19sing1.08Å1.08Å
C22H20sing1.08Å1.08Å
C23H21sing1.08Å1.08Å
O30H6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O30C24C14128.3°126.4°
O30C24N25123.5°126.4°
C24O30H6109.5°114.0°
O15C13C14114.6°120.0°
O15C13C1116.2°120.0°
C14C24N25108.2°107.2°
C24C14C13126.2°126.5°
C24C14C27103.2°106.9°
C24N25C28124.2°125.8°
C24N25N26110.3°108.5°
C12C6C1115.4°120.4°
C12C6C5123.2°120.3°
C6C12H3109.5°109.5°
C6C12H4109.4°109.5°
C6C12H5109.5°109.5°
C14C13C1115.5°120.0°
C13C14C27130.5°126.6°
C13C1C6113.9°120.0°
C13C1C2125.9°120.0°
C28N25N26125.4°125.7°
N25C28H11109.5°109.5°
N25C28H12109.4°109.5°
N25C28H13109.5°109.5°
C14C27N26107.6°108.2°
C14C27C31130.3°125.9°
N25N26C27110.7°109.2°
O11C10C5122.0°120.9°
O11C10N9116.6°120.9°
C1C6C5121.4°119.3°
C6C1C2120.3°120.1°
C6C5C10124.7°121.7°
C6C5C4118.5°120.1°
C1C2C3118.5°120.7°
C1C2H1120.8°119.7°
N26C27C31122.2°125.9°
C27C31H14109.5°109.5°
C27C31H15109.5°109.4°
C27C31H16109.5°109.5°
C5C10N9121.3°118.2°
C10C5C4116.8°118.3°
C10N9C16119.3°119.4°
C10N9C8119.7°121.2°
C5C4C3120.3°119.8°
C5C4N7120.3°118.7°
C23C22C21120.4°120.1°
C22C23C16120.5°119.9°
C23C22H20119.8°120.0°
C22C23H21119.7°120.0°
C22C21C20119.4°120.1°
C22C21H19120.3°120.0°
C21C22H20119.9°119.9°
C23C16N9119.2°120.1°
C23C16C19118.9°119.9°
C16C23H21119.7°120.0°
C2C3C4121.0°120.0°
C3C2H1120.8°119.6°
C2C3H2119.5°120.0°
C21C20C19120.2°120.1°
C21C20H18119.9°120.0°
C20C21H19120.3°119.9°
N9C16C19121.8°120.0°
C16N9C8121.0°119.4°
C16C19C20120.6°119.9°
C16C19CL1120.5°120.1°
N9C8N7120.4°122.9°
N9C8O17120.1°118.6°
C3C4N7119.4°121.4°
C4C3H2119.5°120.0°
C4N7C8121.5°120.7°
C4N7C18119.1°119.6°
C20C19CL1118.9°120.0°
C19C20H18119.9°120.0°
N7C8O17119.5°118.5°
C8N7C18119.4°119.7°
N7C18H8109.5°109.5°
N7C18H9109.5°109.5°
N7C18H10109.5°109.5°
H3C12H4109.5°109.5°
H3C12H5109.4°109.4°
H4C12H5109.5°109.4°
H8C18H9109.5°109.5°
H8C18H10109.5°109.5°
H9C18H10109.5°109.4°
H11C28H12109.5°109.4°
H11C28H13109.4°109.4°
H12C28H13109.5°109.5°
H14C31H15109.4°109.5°
H14C31H16109.5°109.5°
H15C31H16109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O30C24C14N25178.4°180.0°
O30C24C14C132.8°0.0°
O30C24N25C280.8°0.0°
O30C24C14C27180.0°179.8°
O30C24N25N26179.8°179.9°
O15C13C14C2423.5°89.9°
O15C13C14C1139.2°179.9°
O15C13C14C27160.2°89.8°
O15C13C1C6103.5°6.3°
O15C13C1C277.2°173.9°
C24C14C13C27176.3°179.7°
C24C14C13C1162.8°90.2°
C14C24N25C28179.3°180.0°
C14C24N25N261.3°0.1°
C24C14C27N261.4°0.3°
C24C14C27C31179.4°179.8°
C14C24O30H67.7°86.2°
N25C24C14C13178.7°180.0°
C24N25C28N26179.3°179.9°
N25C24C14C271.6°0.2°
C24N25N26C270.3°0.0°
C24N25C28H11179.3°90.0°
C24N25C28H1259.3°150.0°
C24N25C28H1360.7°29.9°
N25C24O30H6170.5°93.8°
C12C6C1C130.4°0.2°
C12C6C1C5179.7°180.0°
C12C6C1C2179.7°180.0°
C12C6C5C100.1°0.0°
C12C6C5C4179.9°180.0°
C6C12H3H4120.0°120.0°
C6C12H3H5120.0°120.0°
C6C12H4H5120.0°120.0°
C14C13C1C6117.9°173.6°
C14C13C1C261.3°6.2°
C13C14C27N26178.4°180.0°
C13C14C27C312.4°0.0°
C1C13C14C2720.9°90.1°
C13C1C6C2179.3°179.8°
C13C1C6C5179.3°179.8°
C13C1C2C3179.4°179.8°
C13C1C2H10.5°0.2°
C28N25N26C27179.7°179.9°
N25C28H11H12120.0°120.0°
N25C28H11H13120.0°120.0°
N25C28H12H13120.0°120.1°
C14C27N26N250.8°0.2°
C14C27N26C31179.3°180.0°
C14C27C31H14179.1°90.0°
C14C27C31H1559.1°150.0°
C14C27C31H1660.9°30.0°
N25N26C27C31180.0°179.9°
N26N25C28H110.0°89.8°
N26N25C28H12120.0°30.1°
N26N25C28H13120.0°150.2°
O11C10C5C60.2°0.0°
O11C10C5N9179.9°180.0°
O11C10C5C4179.8°180.0°
O11C10N9C160.7°0.0°
O11C10N9C8179.9°180.0°
C1C6C5C10179.8°179.9°
C1C6C5C40.2°0.0°
C6C1C2C30.2°0.1°
C6C1C2H1179.7°180.0°
C1C6C12H389.9°87.8°
C1C6C12H4150.1°152.1°
C1C6C12H530.1°32.2°
C5C6C1C20.1°0.1°
C6C5C10C4180.0°180.0°
C6C5C10N9179.9°180.0°
C6C5C4C30.3°0.0°
C6C5C4N7180.0°180.0°
C5C6C12H389.9°92.2°
C5C6C12H430.2°27.8°
C5C6C12H5150.2°147.8°
C1C2C3H1180.0°180.0°
C1C2C3C40.1°0.0°
C1C2C3H2179.9°180.0°
N26C27C31H140.0°89.9°
N26C27C31H15120.0°30.0°
N26C27C31H16120.0°150.0°
C27C31H14H15120.0°119.9°
C27C31H14H16120.0°120.0°
C27C31H15H16120.0°120.0°
C5C10N9C16179.4°180.0°
C5C10N9C80.0°0.0°
C10C5C4C3179.7°180.0°
C10C5C4N70.0°0.0°
N9C10C5C40.1°0.0°
C10N9C16C2392.3°89.7°
C10N9C16C8179.4°180.0°
C10N9C16C1987.1°90.0°
C10N9C8N70.1°0.1°
C10N9C8O17180.0°180.0°
C5C4C3C20.2°0.0°
C5C4C3N7179.7°180.0°
C5C4N7C80.1°0.1°
C5C4N7C18180.0°180.0°
C5C4C3H2179.8°180.0°
C23C22C21H20180.0°179.4°
C22C23C16H21180.0°179.5°
C23C22C21C200.1°0.4°
C22C23C16N9179.8°179.8°
C22C23C16C190.4°0.5°
C23C22C21H19180.0°179.7°
C21C22C23C160.2°0.6°
C22C21C20H19180.0°179.9°
C22C21C20C190.1°0.1°
C22C21C20H18179.9°179.9°
C21C22C23H21179.8°180.0°
C23C16N9C19179.4°179.7°
C23C16N9C887.2°90.3°
C23C16C19C200.3°0.2°
C23C16C19CL1179.7°179.8°
C16C23C22H20179.8°180.0°
C2C3C4H2180.0°180.0°
C2C3C4N7179.9°180.0°
C21C20C19C160.1°0.0°
C21C20C19H18180.0°180.0°
C21C20C19CL1179.9°180.0°
C20C21C22H20179.9°179.8°
N9C16C19C20179.7°179.9°
N9C16C19CL10.3°0.1°
C16N9C8N7179.5°179.9°
C16N9C8O170.6°0.0°
N9C16C23H210.3°0.3°
C19C16N9C893.5°90.0°
C16C19C20CL1179.9°180.0°
C16C19C20H18179.9°180.0°
C19C16C23H21179.6°180.0°
N9C8N7C40.2°0.1°
N9C8N7O17179.9°179.9°
N9C8N7C18180.0°180.0°
C3C4N7C8179.8°180.0°
C3C4N7C180.3°0.0°
C4C3C2H1179.8°180.0°
C4N7C8C18179.9°179.9°
C4N7C8O17179.9°180.0°
N7C4C3H20.1°0.0°
C4N7C18H8180.0°89.9°
C4N7C18H960.0°150.0°
C4N7C18H1060.0°30.1°
C19C20C21H19179.9°180.0°
CL1C19C20H180.1°0.0°
C8N7C18H80.1°90.0°
C8N7C18H9120.1°30.0°
C8N7C18H10119.9°150.0°
O17C8N7C180.0°0.0°
N7C18H8H9120.0°120.0°
N7C18H8H10120.0°120.0°
N7C18H9H10120.0°120.0°
H1C2C3H20.2°0.0°
H3C12H4H5120.0°119.9°
H8C18H9H10120.0°120.0°
H11C28H12H13120.0°119.9°
H14C31H15H16120.0°120.1°
H18C20C21H190.1°0.0°
H19C21C22H200.0°0.4°
H20C22C23H210.2°0.6°

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon