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CVR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.37Å1.37Å
N1C6sing1.38Å1.38Å
N1C1Dsing1.45Å1.45Å
C2N3doub1.36Å1.36Å
N3C4sing1.35Å1.35Å
C4C5doub1.40Å1.40ÅAromatic
C4N9sing1.33Å1.33ÅAromatic
C5C6sing1.41Å1.41Å
C5N7sing1.35Å1.35ÅAromatic
C6N6doub1.44Å1.44Å
N7C8doub1.35Å1.35ÅAromatic
C8N9sing1.35Å1.35ÅAromatic
N9C1'sing1.47Å1.47Å
PAO1Asing1.51Å1.51Å
PAO2Adoub1.51Å1.51Å
PAO3Asing1.59Å1.59Å
PAO5'sing1.58Å1.58Å
PBO1Bdoub1.52Å1.52Å
PBO2Bsing1.53Å1.53Å
PBO3Asing1.58Å1.58Å
PBO5Dsing1.59Å1.59Å
C1'C2'sing1.47Å1.47Å
C1'O4'sing1.37Å1.37Å
C1DC2Dsing1.49Å1.49Å
C1DC4Xsing1.47Å1.47Å
C2'O2'sing1.35Å1.35Å
C2'C3'sing1.47Å1.47Å
C2DO2Dsing1.41Å1.41Å
C2DC3Dsing1.50Å1.50Å
C3'O3'sing1.37Å1.37Å
C3'C4'sing1.48Å1.48Å
C3DO3Dsing1.37Å1.37Å
C3DC4Dsing1.48Å1.48Å
C4'O4'sing1.39Å1.39Å
C4'C5'sing1.50Å1.50Å
C4DC4Xsing1.49Å1.49Å
C4DC5Dsing1.50Å1.50Å
C5'O5'sing1.40Å1.40Å
C5DO5Dsing1.40Å1.40Å
C2H2sing1.08Å1.08Å
N6HN6sing1.00Å1.00Å
C8H8sing1.08Å1.08Å
C1'H1'sing1.10Å1.10Å
O1AHO1Asing0.95Å0.95Å
C1DH1Dsing1.10Å1.10Å
C2'H2'sing1.10Å1.10Å
O2'HO2'sing0.95Å0.95Å
O2BHO2Bsing0.95Å0.95Å
C2DH2Dsing1.10Å1.10Å
O2DHO2Dsing0.95Å0.95Å
C3'H3'sing1.10Å1.10Å
O3'HO3'sing0.95Å0.95Å
C3DH3Dsing1.10Å1.10Å
O3DHO3Dsing0.95Å0.95Å
C4'H4'sing1.10Å1.10Å
C4DH4Dsing1.10Å1.10Å
C4XH4Xsing1.10Å1.10Å
C4XH4XAsing1.10Å1.10Å
C5'H5'sing1.10Å1.10Å
C5'H5'Asing1.10Å1.10Å
C5DH5Dsing1.10Å1.10Å
C5DH5DAsing1.10Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C692.2°92.2°
C2N1C1D108.3°108.3°
N1C2N3135.3°135.3°
N1C2H2112.4°112.4°
C6N1C1D159.5°159.5°
N1C6C5132.2°132.2°
N1C6N6117.7°117.7°
N1C1DC2D114.9°114.9°
N1C1DC4X106.0°106.0°
N1C1DH1D110.5°110.5°
C2N3C4133.1°133.1°
N3C2H2112.4°112.4°
N3C4C594.0°94.0°
N3C4N9158.1°158.1°
C5C4N9108.0°108.0°
C4C5C6131.6°131.6°
C4C5N7106.6°106.6°
C4N9C8108.1°108.1°
C4N9C1'137.1°137.1°
C6C5N7121.8°121.8°
C5C6N6108.4°108.4°
C5N7C8108.0°108.0°
C6N6HN6112.0°112.0°
N7C8N9109.2°109.2°
N7C8H8125.4°125.4°
C8N9C1'114.7°114.7°
N9C8H8125.4°125.4°
N9C1'C2'105.5°105.5°
N9C1'O4'110.1°110.1°
N9C1'H1'110.2°110.2°
O1APAO2A108.1°108.1°
O1APAO3A111.1°111.1°
O1APAO5'108.2°108.2°
PAO1AHO1A109.5°109.5°
O2APAO3A110.4°110.4°
O2APAO5'110.4°110.4°
O3APAO5'108.6°108.6°
PAO3APB124.2°124.2°
PAO5'C5'121.9°121.9°
O1BPBO2B110.7°110.7°
O1BPBO3A110.5°110.5°
O1BPBO5D109.5°109.5°
O2BPBO3A110.8°110.8°
O2BPBO5D105.8°105.8°
PBO2BHO2B109.5°109.5°
O3APBO5D109.4°109.4°
PBO5DC5D115.1°115.1°
C2'C1'O4'108.9°108.9°
C1'C2'O2'111.6°111.6°
C1'C2'C3'103.1°103.1°
C2'C1'H1'110.2°110.2°
C1'C2'H2'110.0°110.0°
C1'O4'C4'109.1°109.1°
O4'C1'H1'111.7°111.7°
C2DC1DC4X104.8°104.8°
C1DC2DO2D109.6°109.6°
C1DC2DC3D108.9°108.9°
C2DC1DH1D110.0°110.0°
C1DC2DH2D110.0°110.0°
C1DC4XC4D109.1°109.1°
C4XC1DH1D110.3°110.3°
C1DC4XH4X109.6°109.6°
C1DC4XH4XA109.6°109.6°
O2'C2'C3'110.1°110.1°
O2'C2'H2'111.8°111.8°
C2'O2'HO2'109.5°109.5°
C2'C3'O3'109.9°109.9°
C2'C3'C4'105.1°105.1°
C3'C2'H2'110.0°110.0°
C2'C3'H3'110.0°110.0°
O2DC2DC3D107.3°107.3°
O2DC2DH2D111.1°111.1°
C2DO2DHO2D109.5°109.5°
C2DC3DO3D110.1°110.1°
C2DC3DC4D105.8°105.8°
C3DC2DH2D109.8°109.8°
C2DC3DH3D109.9°109.9°
O3'C3'C4'110.3°110.3°
O3'C3'H3'111.6°111.6°
C3'O3'HO3'109.5°109.5°
C3'C4'O4'108.0°108.0°
C3'C4'C5'108.3°108.3°
C4'C3'H3'109.8°109.8°
C3'C4'H4'109.6°109.6°
O3DC3DC4D108.7°108.7°
O3DC3DH3D111.9°111.9°
C3DO3DHO3D109.5°109.5°
C3DC4DC4X107.9°107.9°
C3DC4DC5D111.8°111.8°
C4DC3DH3D110.2°110.2°
C3DC4DH4D108.7°108.6°
O4'C4'C5'110.5°110.5°
O4'C4'H4'111.0°111.0°
C4'C5'O5'116.4°116.4°
C5'C4'H4'109.4°109.4°
C4'C5'H5'107.7°107.7°
C4'C5'H5'A107.7°107.7°
C4XC4DC5D111.7°111.7°
C4XC4DH4D108.5°108.5°
C4DC4XH4X109.5°109.5°
C4DC4XH4XA109.5°109.6°
C4DC5DO5D122.8°122.8°
C5DC4DH4D108.3°108.3°
C4DC5DH5D106.0°106.0°
C4DC5DH5DA106.1°106.1°
O5'C5'H5'107.7°107.7°
O5'C5'H5'A107.7°107.7°
O5DC5DH5D106.0°106.0°
O5DC5DH5DA106.0°106.0°
H4XC4XH4XA109.5°109.5°
H5'C5'H5'A109.5°109.5°
H5DC5DH5DA109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6C1D179.1°179.1°
N1C2N3H2180.0°180.0°
N1C2N3C416.9°16.9°
C2N1C6C59.1°9.1°
C2N1C6N6171.9°171.9°
C2N1C1DC2D135.4°135.4°
C2N1C1DC4X20.2°20.2°
C2N1C1DH1D99.3°99.3°
C6N1C2N315.1°15.1°
N1C6C5C43.7°3.7°
N1C6C5N6164.0°164.0°
N1C6C5N7176.2°176.2°
C6N1C1DC2D43.7°43.7°
C6N1C1DC4X158.9°158.9°
C6N1C2H2164.9°164.9°
N1C6N6HN6166.7°166.7°
C6N1C1DH1D81.6°81.6°
C1DN1C2N3165.2°165.2°
C1DN1C6C5171.8°171.8°
C1DN1C6N69.0°9.0°
N1C1DC2DC4X116.0°116.0°
N1C1DC2DH1D125.5°125.5°
N1C1DC4XH1D119.7°119.7°
N1C1DC2DO2D145.9°145.9°
N1C1DC2DC3D97.1°97.1°
N1C1DC4XC4D105.2°105.2°
C1DN1C2H214.8°14.8°
N1C1DC2DH2D23.4°23.4°
N1C1DC4XH4X14.7°14.7°
N1C1DC4XH4XA134.9°134.8°
C2N3C4C55.3°5.3°
C2N3C4N9174.6°174.6°
N3C4C5N9180.0°180.0°
N3C4C5C60.1°0.1°
N3C4C5N7179.8°179.8°
N3C4N9C8179.7°179.7°
N3C4N9C1'0.5°0.5°
C4N3C2H2163.1°163.1°
C4C5C6N7179.9°179.9°
C4C5C6N6167.7°167.7°
C4C5N7C80.1°0.1°
C5C4N9C80.4°0.4°
C5C4N9C1'179.6°179.6°
N9C4C5C6179.9°179.9°
N9C4C5N70.2°0.2°
C4N9C8N70.5°0.5°
C4N9C8C1'179.4°179.4°
C4N9C1'C2'15.2°15.2°
C4N9C1'O4'102.2°102.2°
C4N9C8H8179.5°179.5°
C4N9C1'H1'134.1°134.1°
C6C5N7C8179.8°179.8°
C5C6N6HN60.0°0.0°
N7C5C6N612.2°12.2°
C5N7C8N90.4°0.4°
C5N7C8H8179.6°179.6°
N7C8N9H8180.0°180.0°
N7C8N9C1'179.9°179.9°
C8N9C1'C2'164.0°164.0°
C8N9C1'O4'78.6°78.6°
C8N9C1'H1'45.1°45.1°
N9C1'C2'O4'118.2°118.2°
N9C1'C2'H1'119.0°119.0°
N9C1'O4'H1'122.8°122.8°
N9C1'C2'O2'99.3°99.3°
N9C1'C2'C3'142.6°142.6°
N9C1'O4'C4'133.7°133.7°
C1'N9C8H80.1°0.1°
N9C1'C2'H2'25.4°25.4°
O1APAO2AO3A121.7°121.7°
O1APAO2AO5'118.2°118.2°
O1APAO3AO5'118.9°118.9°
O1APAO3APB3.6°3.6°
O1APAO5'C5'99.7°99.7°
O2APAO3AO5'121.2°121.2°
O2APAO3APB116.4°116.4°
O2APAO5'C5'18.4°18.4°
O2APAO1AHO1A0.0°0.0°
PAO3APBO1B36.6°36.6°
PAO3APBO2B86.4°86.4°
PAO3APBO5D157.3°157.3°
O3APAO5'C5'139.6°139.6°
O3APAO1AHO1A121.3°121.3°
O5'PAO3APB122.4°122.4°
PAO5'C5'C4'148.3°148.3°
O5'PAO1AHO1A119.6°119.6°
PAO5'C5'H5'90.7°90.7°
PAO5'C5'H5'A27.3°27.3°
O1BPBO2BO3A123.0°123.0°
O1BPBO2BO5D118.6°118.6°
O1BPBO3AO5D120.7°120.7°
O1BPBO5DC5D125.2°125.2°
O1BPBO2BHO2B0.0°0.0°
O2BPBO3AO5D116.3°116.3°
O2BPBO5DC5D5.9°5.9°
O3APBO5DC5D113.5°113.5°
O3APBO2BHO2B123.0°123.0°
PBO5DC5DC4D168.1°168.1°
O5DPBO2BHO2B118.6°118.6°
PBO5DC5DH5D46.2°46.2°
PBO5DC5DH5DA70.1°70.1°
C2'C1'O4'H1'122.0°122.0°
C1'C2'O2'C3'113.9°113.9°
C1'C2'O2'H2'123.6°123.6°
C1'C2'C3'H2'117.2°117.2°
C1'C2'C3'O3'98.2°98.2°
C1'C2'C3'C4'20.5°20.5°
C2'C1'O4'C4'18.5°18.5°
C1'C2'O2'HO2'180.0°180.0°
C1'C2'C3'H3'138.6°138.6°
O4'C1'C2'O2'142.5°142.5°
O4'C1'C2'C3'24.4°24.4°
C1'O4'C4'C3'4.7°4.7°
C1'O4'C4'C5'123.0°123.0°
O4'C1'C2'H2'92.8°92.8°
C1'O4'C4'H4'115.5°115.5°
C2DC1DC4XH1D118.3°118.3°
C1DC2DO2DC3D118.1°118.1°
C1DC2DO2DH2D121.8°121.8°
C1DC2DC3DH2D120.6°120.6°
C1DC2DC3DO3D131.1°131.1°
C1DC2DC3DC4D13.9°13.9°
C2DC1DC4XC4D16.8°16.8°
C1DC2DO2DHO2D180.0°180.0°
C1DC2DC3DH3D105.1°105.1°
C2DC1DC4XH4X136.7°136.7°
C2DC1DC4XH4XA103.1°103.2°
C4XC1DC2DO2D98.2°98.2°
C4XC1DC2DC3D18.9°18.9°
C1DC4XC4DC3D8.6°8.6°
C1DC4XC4DH4X119.9°119.9°
C1DC4XC4DH4XA119.9°120.0°
C1DC4XC4DC5D114.6°114.6°
C4XC1DC2DH2D139.4°139.4°
C1DC4XC4DH4D126.2°126.1°
C1DC4XH4XH4XA120.2°120.2°
O2'C2'C3'H2'123.5°123.5°
O2'C2'C3'O3'21.0°21.0°
O2'C2'C3'C4'139.7°139.7°
O2'C2'C1'H1'19.7°19.7°
O2'C2'C3'H3'102.2°102.2°
C2'C3'O3'C4'115.5°115.5°
C2'C3'O3'H3'122.3°122.3°
C2'C3'C4'H3'118.2°118.2°
C2'C3'C4'O4'10.7°10.7°
C2'C3'C4'C5'109.0°109.0°
C3'C2'C1'H1'98.4°98.4°
C3'C2'O2'HO2'66.1°66.1°
C2'C3'O3'HO3'180.0°180.0°
C2'C3'C4'H4'131.7°131.7°
O2DC2DC3DH2D120.9°120.9°
O2DC2DC3DO3D12.6°12.6°
O2DC2DC3DC4D104.6°104.6°
O2DC2DC1DH1D20.3°20.3°
O2DC2DC3DH3D136.4°136.4°
C2DC3DO3DC4D115.5°115.5°
C2DC3DO3DH3D122.6°122.6°
C2DC3DC4DH3D118.7°118.7°
C2DC3DC4DC4X3.2°3.2°
C2DC3DC4DC5D126.4°126.4°
C3DC2DC1DH1D137.4°137.4°
C3DC2DO2DHO2D61.9°61.9°
C2DC3DO3DHO3D180.0°180.0°
C2DC3DC4DH4D114.2°114.2°
O3'C3'C4'H3'123.3°123.3°
O3'C3'C4'O4'107.8°107.8°
O3'C3'C4'C5'132.5°132.5°
O3'C3'C2'H2'144.6°144.6°
O3'C3'C4'H4'13.2°13.2°
C3'C4'O4'C5'118.3°118.3°
C3'C4'O4'H4'120.2°120.2°
C3'C4'C5'H4'119.4°119.4°
C3'C4'C5'O5'91.3°91.3°
C4'C3'C2'H2'96.7°96.7°
C4'C3'O3'HO3'64.5°64.6°
C3'C4'C5'H5'147.7°147.7°
C3'C4'C5'H5'A29.8°29.7°
O3DC3DC4DH3D123.0°123.0°
O3DC3DC4DC4X121.5°121.5°
O3DC3DC4DC5D115.3°115.3°
O3DC3DC2DH2D108.3°108.3°
O3DC3DC4DH4D4.1°4.0°
C3DC4DC4XC5D123.2°123.2°
C3DC4DC4XH4D117.5°117.5°
C3DC4DC5DH4D119.6°119.6°
C3DC4DC5DO5D67.5°67.5°
C4DC3DC2DH2D134.4°134.4°
C4DC3DO3DHO3D64.6°64.6°
C3DC4DC4XH4X128.6°128.6°
C3DC4DC4XH4XA111.3°111.4°
C3DC4DC5DH5D170.7°170.7°
C3DC4DC5DH5DA54.4°54.4°
O4'C4'C5'H4'122.5°122.5°
O4'C4'C5'O5'26.9°26.9°
C4'O4'C1'H1'103.4°103.4°
O4'C4'C3'H3'128.9°128.9°
O4'C4'C5'H5'94.1°94.1°
O4'C4'C5'H5'A147.9°147.9°
C4'C5'O5'H5'121.0°121.0°
C4'C5'O5'H5'A121.0°121.0°
C5'C4'C3'H3'9.2°9.2°
C4'C5'H5'H5'A116.8°116.9°
C4XC4DC5DH4D119.3°119.4°
C4XC4DC5DO5D53.6°53.6°
C4DC4XC1DH1D135.1°135.1°
C4XC4DC3DH3D115.5°115.5°
C4DC4XH4XH4XA120.1°120.1°
C4XC4DC5DH5D68.3°68.3°
C4XC4DC5DH5DA175.4°175.4°
C4DC5DO5DH5D121.8°121.8°
C4DC5DO5DH5DA121.8°121.8°
C5DC4DC3DH3D7.7°7.7°
C5DC4DC4XH4X5.3°5.3°
C5DC4DC4XH4XA125.5°125.4°
C4DC5DH5DH5DA114.0°114.0°
O5'C5'C4'H4'149.3°149.3°
O5'C5'H5'H5'A116.9°116.9°
O5DC5DC4DH4D172.9°173.0°
O5DC5DH5DH5DA114.0°114.0°
H1'C1'C2'H2'144.3°144.3°
H1DC1DC2DH2D102.1°102.1°
H1DC1DC4XH4X104.9°104.9°
H1DC1DC4XH4XA15.2°15.2°
H2'C2'O2'HO2'56.4°56.4°
H2'C2'C3'H3'21.4°21.4°
H2DC2DO2DHO2D58.2°58.2°
H2DC2DC3DH3D15.5°15.5°
H3'C3'O3'HO3'57.8°57.7°
H3'C3'C4'H4'110.1°110.1°
H3DC3DO3DHO3D57.4°57.4°
H3DC3DC4DH4D127.1°127.1°
H4'C4'C5'H5'28.3°28.3°
H4'C4'C5'H5'A89.6°89.7°
H4DC4DC4XH4X113.9°113.9°
H4DC4DC4XH4XA6.2°6.1°
H4DC4DC5DH5D51.1°51.1°
H4DC4DC5DH5DA65.2°65.2°

222415

PDB entries from 2024-07-10

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