Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

CB3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.36Å1.34ÅAromatic
N1C8Asing1.38Å1.36ÅAromatic
N1HN1sing0.97Å1.02Å
C2NA2sing1.37Å1.33Å
C2N3doub1.32Å1.36ÅAromatic
NA2HN21sing0.97Å1.02Å
NA2HN22sing0.97Å1.02Å
N3C4sing1.34Å1.36ÅAromatic
C4O4doub1.22Å1.38Å
C4C4Asing1.48Å1.40ÅAromatic
C4AC5doub1.39Å1.40ÅAromatic
C4AC8Asing1.40Å1.41ÅAromatic
C5C6sing1.38Å1.42ÅAromatic
C5H5sing1.08Å1.10Å
C6C7doub1.39Å1.42ÅAromatic
C6C9sing1.51Å1.48Å
C7C8sing1.38Å1.41ÅAromatic
C7H7sing1.08Å1.10Å
C8C8Adoub1.39Å1.41ÅAromatic
C8H8sing1.08Å1.10Å
C9N10sing1.47Å1.49Å
C9H91sing1.09Å1.12Å
C9H92sing1.09Å1.12Å
N10C14sing1.39Å1.36Å
N10CP1sing1.46Å1.46Å
C11C12doub1.40Å1.41ÅAromatic
C11C16sing1.40Å1.39ÅAromatic
C11Csing1.47Å1.45Å
C12C13sing1.37Å1.40ÅAromatic
C12H12sing1.08Å1.10Å
C13C14doub1.39Å1.42ÅAromatic
C13H13sing1.08Å1.10Å
C14C15sing1.39Å1.42ÅAromatic
C15C16doub1.38Å1.39ÅAromatic
C15H15sing1.08Å1.10Å
C16H16sing1.08Å1.10Å
COdoub1.22Å1.23Å
CNsing1.35Å1.35Å
NCAsing1.46Å1.49Å
NHNsing0.97Å1.02Å
CACBsing1.53Å1.53Å
CACTsing1.51Å1.53Å
CAHAsing1.09Å1.11Å
CBCGsing1.53Å1.52Å
CBHB1sing1.09Å1.12Å
CBHB2sing1.09Å1.11Å
CGCDsing1.51Å1.53Å
CGHG1sing1.09Å1.11Å
CGHG2sing1.09Å1.12Å
CDOE1doub1.21Å1.26Å
CDOE2sing1.34Å1.25Å
OE2HOE2sing0.97Å0.95Å
CTO1doub1.21Å1.25Å
CTO2sing1.34Å1.25Å
O2HO2sing0.97Å0.95Å
CP1CP2sing1.47Å1.45Å
CP1HP11sing1.09Å1.12Å
CP1HP12sing1.09Å1.12Å
CP2CP3trip1.17Å1.20Å
CP3HP3sing1.05Å1.09Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C8A122.3°120.3°
C2N1HN1107.7°119.8°
N1C2NA2121.0°118.6°
N1C2N3118.9°122.9°
C8AN1HN1107.6°119.9°
N1C8AC4A119.5°118.5°
N1C8AC8120.5°121.8°
NA2C2N3120.1°118.5°
C2NA2HN21120.9°120.1°
C2NA2HN22108.1°120.0°
C2N3C4121.7°121.8°
HN21NA2HN22108.2°120.0°
N3C4O4117.9°120.8°
N3C4C4A120.0°118.4°
O4C4C4A122.1°120.8°
C4C4AC5122.9°121.9°
C4C4AC8A117.2°118.1°
C5C4AC8A119.9°120.0°
C4AC5C6120.9°119.5°
C4AC5H5119.1°120.2°
C4AC8AC8119.9°119.7°
C6C5H5120.0°120.3°
C5C6C7118.9°120.4°
C5C6C9122.2°119.8°
C7C6C9116.7°119.8°
C6C7C8120.1°120.7°
C6C7H7120.0°119.7°
C6C9N10116.3°109.5°
C6C9H91109.7°109.5°
C6C9H92109.7°109.5°
C8C7H7119.9°119.6°
C7C8C8A120.2°119.7°
C7C8H8120.1°120.1°
C8AC8H8119.8°120.2°
N10C9H91109.7°109.5°
N10C9H92109.7°109.4°
C9N10C14127.5°120.0°
C9N10CP1109.6°120.0°
H91C9H92100.4°109.5°
C14N10CP1122.9°120.1°
N10C14C13122.2°120.0°
N10C14C15118.9°119.9°
N10CP1CP2106.5°109.5°
N10CP1HP11113.3°109.4°
N10CP1HP12113.3°109.5°
C12C11C16120.4°119.8°
C12C11C122.9°120.1°
C11C12C13119.9°119.9°
C11C12H12120.5°120.0°
C16C11C116.8°120.1°
C11C16C15120.0°119.9°
C11C16H16120.0°120.0°
C11CO122.5°120.0°
C11CN115.9°120.0°
C13C12H12119.6°120.0°
C12C13C14120.0°120.1°
C12C13H13119.5°120.0°
C14C13H13120.5°119.9°
C13C14C15118.9°120.1°
C14C15C16120.8°120.1°
C14C15H15120.5°120.0°
C16C15H15118.7°120.0°
C15C16H16120.0°120.0°
OCN121.6°120.0°
CNCA128.2°120.0°
CNHN110.0°120.0°
CANHN121.8°120.0°
NCACB110.7°109.5°
NCACT108.5°109.5°
NCAHA109.3°109.5°
CBCACT109.8°109.5°
CBCAHA108.1°109.4°
CACBCG114.6°109.5°
CACBHB1110.3°109.4°
CACBHB2110.4°109.5°
CTCAHA110.4°109.5°
CACTO1117.3°120.0°
CACTO2119.1°120.0°
CGCBHB1110.3°109.5°
CGCBHB2110.3°109.5°
CBCGCD113.3°109.5°
CBCGHG1110.8°109.5°
CBCGHG2110.8°109.5°
HB1CBHB299.9°109.5°
CDCGHG1110.8°109.4°
CDCGHG2110.8°109.5°
CGCDOE1119.4°120.0°
CGCDOE2118.0°120.0°
HG1CGHG299.5°109.5°
OE1CDOE2122.6°120.0°
CDOE2HOE2118.0°119.9°
O1CTO2123.6°120.0°
CTO2HO2119.1°120.1°
CP2CP1HP11113.3°109.5°
CP2CP1HP12113.3°109.5°
CP1CP2CP3176.5°180.0°
HP11CP1HP1297.1°109.4°
CP2CP3HP3180.0°179.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C8AHN1125.3°179.8°
N1C2NA2N3179.4°179.8°
N1C2NA2HN21180.0°179.7°
N1C2NA2HN2254.7°0.4°
N1C2N3C40.1°0.2°
C2N1C8AC4A0.5°0.5°
C2N1C8AC8177.9°179.8°
C8AN1C2NA2176.9°179.7°
C8AN1C2N32.5°0.5°
N1C8AC4AC43.9°0.3°
N1C8AC4AC5175.5°179.7°
N1C8AC4AC8178.4°179.6°
N1C8AC8C7176.3°179.7°
N1C8AC8H83.7°0.3°
HN1N1C2NA257.8°0.2°
HN1N1C2N3122.8°179.7°
HN1N1C8AC4A124.8°179.6°
HN1N1C8AC856.8°0.0°
C2NA2HN21HN22125.3°179.8°
NA2C2N3C4179.5°179.9°
N3C2NA2HN210.6°0.1°
N3C2NA2HN22124.7°179.7°
C2N3C4O4173.7°180.0°
C2N3C4C4A4.6°0.0°
N3C4O4C4A178.3°179.9°
N3C4C4AC5173.0°180.0°
N3C4C4AC8A6.4°0.1°
O4C4C4AC58.7°0.0°
O4C4C4AC8A171.9°180.0°
C4C4AC5C8A179.4°179.9°
C4C4AC5C6180.0°180.0°
C4C4AC5H50.0°0.0°
C4C4AC8AC8177.7°180.0°
C4AC5C6H5180.0°180.0°
C4AC5C6C72.4°0.1°
C4AC5C6C9160.1°180.0°
C5C4AC8AC82.9°0.1°
C8AC4AC5C60.6°0.1°
C8AC4AC5H5179.4°179.9°
C4AC8AC8C72.1°0.1°
C4AC8AC8H8177.9°179.9°
C5C6C7C9163.5°179.9°
C5C6C7C83.2°0.1°
C5C6C7H7176.8°180.0°
C5C6C9N106.9°90.0°
C5C6C9H91132.3°150.0°
C5C6C9H92118.3°30.0°
H5C5C6C7177.5°179.9°
H5C5C6C919.9°0.0°
C6C7C8H7180.0°180.0°
C6C7C8C8A1.0°0.0°
C6C7C8H8179.1°180.0°
C7C6C9N10156.0°90.1°
C7C6C9H9130.7°30.0°
C7C6C9H9278.7°150.0°
C9C6C7C8160.3°180.0°
C9C6C7H719.7°0.0°
C6C9N10H91125.3°120.0°
C6C9N10H92125.3°120.0°
C6C9H91H92115.5°120.0°
C6C9N10C1460.9°89.9°
C6C9N10CP1116.5°90.0°
C7C8C8AH8180.0°180.0°
H7C7C8C8A179.0°180.0°
H7C7C8H80.9°0.0°
N10C9H91H92115.5°120.0°
C9N10C14CP1177.1°179.9°
C9N10C14C13155.2°5.2°
C9N10C14C1524.6°174.6°
C9N10CP1CP299.9°95.2°
C9N10CP1HP11134.8°144.9°
C9N10CP1HP1225.3°24.9°
H91C9N10C1464.4°150.0°
H91C9N10CP1118.2°30.0°
H92C9N10C14173.8°30.0°
H92C9N10CP18.7°150.0°
N10C14C13C12178.3°180.0°
N10C14C13C15179.8°179.7°
N10C14C13H131.7°0.0°
N10C14C15C16178.2°179.7°
N10C14C15H151.8°0.3°
C14N10CP1CP277.7°84.9°
C14N10CP1HP1147.6°35.1°
C14N10CP1HP12157.1°155.0°
CP1N10C14C1321.9°174.9°
CP1N10C14C15158.3°5.4°
N10CP1CP2HP11125.3°120.0°
N10CP1CP2HP12125.2°120.0°
N10CP1HP11HP12119.3°120.0°
N10CP1CP2CP3103.6°171.4°
C12C11C16C179.0°180.0°
C11C12C13H12180.0°180.0°
C11C12C13C140.1°0.0°
C11C12C13H13179.9°179.9°
C12C11C16C152.1°0.3°
C12C11C16H16177.9°180.0°
C12C11CO168.6°0.0°
C12C11CN11.1°180.0°
C16C11C12C132.2°0.0°
C16C11C12H12177.9°180.0°
C11C16C15C140.0°0.6°
C11C16C15H16180.0°179.7°
C11C16C15H15179.9°180.0°
C16C11CO12.4°179.9°
C16C11CN167.9°0.0°
CC11C12C13176.8°180.0°
CC11C12H123.2°0.0°
CC11C16C15176.9°179.7°
CC11C16H163.1°0.0°
C11CON179.6°180.0°
C11CNCA166.1°180.0°
C11CNHN13.8°0.0°
C12C13C14H13180.0°179.9°
C12C13C14C151.9°0.3°
H12C12C13C14179.9°180.0°
H12C12C13H130.1°0.1°
C13C14C15C162.0°0.6°
C13C14C15H15178.1°180.0°
H13C13C14C15178.1°179.8°
C14C15C16H15180.0°179.4°
C14C15C16H16180.0°179.7°
H15C15C16H160.1°0.3°
OCNCA14.2°0.0°
OCNHN165.8°179.9°
CNCAHN180.0°179.9°
CNCACB98.0°150.0°
CNCACT141.5°90.0°
CNCAHA21.0°30.1°
NCACBCT119.8°120.1°
NCACBHA119.7°120.0°
NCACTHA119.8°120.0°
NCACBCG82.6°59.9°
NCACBHB142.6°60.0°
NCACBHB2152.1°180.0°
NCACTO1131.6°149.9°
NCACTO247.6°30.0°
HNNCACB82.0°30.1°
HNNCACT38.6°89.9°
HNNCAHA159.0°150.0°
CBCACTHA119.1°119.9°
CACBCGHB1125.2°119.9°
CACBCGHB2125.3°120.1°
CACBHB1HB2116.2°120.0°
CACBCGCD161.3°180.0°
CACBCGHG173.4°60.1°
CACBCGHG236.0°59.9°
CBCACTO1107.3°90.0°
CBCACTO273.5°90.1°
CTCACBCG157.6°180.0°
CTCACBHB177.2°60.0°
CTCACBHB232.3°59.9°
CACTO1O2179.2°179.9°
CACTO2HO2180.0°179.9°
HACACBCG37.1°60.0°
HACACBHB1162.4°NaN°
HACACBHB288.1°60.1°
HACACTO111.8°29.9°
HACACTO2167.4°150.0°
CGCBHB1HB2116.2°120.0°
CBCGCDHG1125.3°120.0°
CBCGCDHG2125.3°120.1°
CBCGHG1HG2116.7°120.0°
CBCGCDOE118.5°0.0°
CBCGCDOE2160.1°180.0°
HB1CBCGCD36.0°60.0°
HB1CBCGHG1161.3°180.0°
HB1CBCGHG289.2°60.0°
HB2CBCGCD73.5°60.0°
HB2CBCGHG151.8°60.0°
HB2CBCGHG2161.3°180.0°
CDCGHG1HG2116.6°120.0°
CGCDOE1OE2178.5°179.9°
CGCDOE2HOE2180.0°180.0°
HG1CGCDOE1106.8°120.0°
HG1CGCDOE274.6°60.0°
HG2CGCDOE1143.8°120.0°
HG2CGCDOE234.8°59.9°
OE1CDOE2HOE21.5°0.1°
O1CTO2HO20.8°0.0°
CP2CP1HP11HP12119.2°120.0°
CP1CP2CP3HP324.3°169.0°
HP11CP1CP2CP3131.1°68.6°
HP12CP1CP2CP321.6°51.4°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon