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SummaryGeometryRelated PDB entries

C5B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
NCAsing1.45Å1.49Å
NHN1sing1.00Å1.00Å
NHN2sing1.00Å1.00Å
CACsing1.51Å1.53Å
CACB1sing1.53Å1.52Å
CACB2sing1.52Å1.53Å
COdoub1.22Å1.25Å
COXTsing1.36Å1.24Å
OXTHOXTsing0.98Å0.95Å
CB1CDsing1.54Å1.52Å
CB1HB11sing1.10Å1.10Å
CB1HB12sing1.10Å1.10Å
CB2CG2sing1.53Å1.53Å
CB2HB21sing1.10Å1.10Å
CB2HB22sing1.10Å1.10Å
CG2CDsing1.53Å1.52Å
CG2HG21sing1.10Å1.10Å
CG2HG22sing1.09Å1.10Å
CDCEsing1.50Å1.52Å
CDHDsing1.10Å1.10Å
CEOZ1doub1.22Å1.25Å
CEOZ2sing1.36Å1.25Å
OZ2HOZ2sing0.98Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CANHN1109.5°118.3°
CANHN2109.5°118.3°
NCAC113.6°106.1°
NCACB1105.7°112.5°
NCACB2106.3°112.4°
HN1NHN2109.4°121.9°
CCACB1111.7°111.2°
CCACB2110.7°111.2°
CACO119.7°125.1°
CACOXT119.4°110.7°
CB1CACB2108.5°103.7°
CACB1CD103.9°105.3°
CACB1HB11111.4°112.1°
CACB1HB12112.5°111.0°
CACB2CG2105.2°103.4°
CACB2HB21110.9°111.0°
CACB2HB22111.9°113.5°
OCOXT120.9°124.2°
COXTHOXT109.5°111.9°
CDCB1HB11111.4°110.7°
CDCB1HB12112.6°110.7°
CB1CDCG2105.0°106.7°
CB1CDCE110.5°110.3°
CB1CDHD112.5°111.3°
HB11CB1HB12105.3°107.1°
CG2CB2HB21110.9°109.4°
CG2CB2HB22111.8°111.3°
CB2CG2CD104.3°105.2°
CB2CG2HG21111.3°109.6°
CB2CG2HG22112.4°111.4°
HB21CB2HB22106.2°108.1°
CDCG2HG21111.3°109.5°
CDCG2HG22112.3°113.6°
CG2CDCE111.5°110.7°
CG2CDHD111.5°110.7°
HG21CG2HG22105.5°107.5°
CECDHD106.0°107.2°
CDCEOZ1119.1°125.0°
CDCEOZ2119.5°110.7°
OZ1CEOZ2121.4°124.3°
CEOZ2HOZ2109.5°111.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CANHN1HN2120.0°166.2°
NCACCB1119.5°122.5°
NCACCB2119.6°122.5°
NCACB1CB2113.7°121.7°
NCACO17.3°117.5°
NCACOXT163.1°62.7°
NCACB1CD131.9°152.9°
NCACB1HB1111.9°86.6°
NCACB1HB12106.1°33.1°
NCACB2CG2109.3°161.9°
NCACB2HB21130.7°44.6°
NCACB2HB2212.3°77.4°
HN1NCAC153.9°149.9°
HN1NCACB183.3°88.4°
HN1NCACB231.9°28.2°
HN2NCAC33.9°43.4°
HN2NCACB1156.7°78.3°
HN2NCACB288.1°165.2°
CCACB1CB2122.2°119.5°
CACOOXT179.6°179.9°
CACOXTHOXT179.6°179.9°
CCACB1CD104.1°88.3°
CCACB1HB11135.9°32.1°
CCACB1HB1218.0°151.9°
CCACB2CG2126.8°79.4°
CCACB2HB216.8°163.4°
CCACB2HB22111.6°41.4°
CB1CACO102.2°5.1°
CB1CACOXT77.4°174.8°
CACB1CDHB11120.0°121.4°
CACB1CDHB12122.0°120.0°
CACB1HB11HB12122.2°122.0°
CB1CACB2CG24.0°40.1°
CB1CACB2HB21116.0°77.1°
CB1CACB2HB22125.6°160.9°
CACB1CDCG233.6°10.5°
CACB1CDCE154.0°130.8°
CACB1CDHD87.8°110.3°
CB2CACO136.9°120.0°
CB2CACOXT43.6°59.9°
CB2CACB1CD18.2°31.2°
CB2CACB1HB11101.8°151.7°
CB2CACB1HB12140.2°88.6°
CACB2CG2HB21120.0°118.4°
CACB2CG2HB22121.6°122.2°
CACB2HB21HB22121.8°125.1°
CACB2CG2CD24.6°33.6°
CACB2CG2HG21144.6°84.0°
CACB2CG2HG2297.4°157.2°
OCOXTHOXT0.0°0.0°
CDCB1HB11HB12122.3°120.8°
CB1CDCG2CB236.4°14.3°
CB1CDCG2CE119.7°120.0°
CB1CDCG2HD122.0°121.3°
CB1CDCG2HG21156.5°103.4°
CB1CDCG2HG2285.5°136.4°
CB1CDCEHD122.1°121.4°
CB1CDCEOZ1135.7°88.6°
CB1CDCEOZ244.1°91.5°
HB11CB1CDCG286.4°131.9°
HB11CB1CDCE34.0°107.8°
HB11CB1CDHD152.2°11.1°
HB12CB1CDCG2155.7°109.5°
HB12CB1CDCE84.0°10.8°
HB12CB1CDHD34.3°129.6°
CG2CB2HB21HB22121.7°121.4°
CB2CG2CDHG21120.0°117.7°
CB2CG2CDHG22122.0°122.2°
CB2CG2HG21HG22122.1°121.2°
CB2CG2CDCE156.1°105.7°
CB2CG2CDHD85.6°135.5°
HB21CB2CG2CD95.4°84.8°
HB21CB2CG2HG2124.6°157.6°
HB21CB2CG2HG22142.6°38.8°
HB22CB2CG2CD146.2°155.8°
HB22CB2CG2HG2193.8°38.2°
HB22CB2CG2HG2224.3°80.6°
CDCG2HG21HG22122.1°123.8°
CG2CDCEHD121.5°120.8°
CG2CDCEOZ1108.0°29.2°
CG2CDCEOZ272.3°150.7°
HG21CG2CDCE83.9°136.6°
HG21CG2CDHD34.4°17.8°
HG22CG2CDCE34.2°16.4°
HG22CG2CDHD152.5°102.3°
CDCEOZ1OZ2179.7°179.8°
CDCEOZ2HOZ2179.7°179.8°
HDCDCEOZ113.5°150.0°
HDCDCEOZ2166.2°29.9°
OZ1CEOZ2HOZ20.0°0.0°

218853

PDB entries from 2024-04-24

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