Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

BO8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1doub1.21Å1.22Å
C1Nsing1.35Å1.35Å
C1CA1sing1.51Å1.51Å
NCAsing1.47Å1.34Å
CABsing1.60Å1.49Å
CACBsing1.53Å1.52Å
BOB1sing1.37Å1.53Å
BOB2sing1.37Å1.53Å
BOX0sing1.37Å1.45Å
CA1CB1sing1.53Å1.52Å
CB1CG1sing1.53Å1.53Å
CG1CD1sing1.53Å1.53Å
CD1CE1sing1.53Å1.53Å
CE1NZ1sing1.47Å1.46Å
CE1CZ1sing1.51Å1.52Å
CZ1Osing1.34Å1.26Å
CZ1OH1doub1.21Å1.26Å
NHsing0.97Å1.00Å
CA1HA11sing1.09Å1.10Å
CA1HA12sing1.09Å1.10Å
CAHAsing1.09Å1.10Å
CBHB1Csing1.09Å1.10Å
CBHB2Csing1.09Å1.10Å
CBHB3Csing1.09Å1.10Å
OB1HB1sing0.97Å0.95Å
OB2HB2sing0.97Å0.95Å
OX0HX0sing0.97Å0.95Å
CB1HB11sing1.09Å1.10Å
CB1HB12sing1.09Å1.10Å
CG1HG11sing1.09Å1.10Å
CG1HG12sing1.09Å1.10Å
CD1HD11sing1.09Å1.10Å
CD1HD12sing1.09Å1.10Å
CE1HE1sing1.09Å1.10Å
NZ1HZ11sing1.01Å1.00Å
NZ1HZ12sing1.01Å1.00Å
OHBsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1N124.6°120.0°
O1C1CA1118.0°120.0°
NC1CA1117.4°120.0°
C1NCA123.8°120.0°
C1NH118.1°120.0°
C1CA1CB1108.3°109.4°
C1CA1HA11109.9°109.5°
C1CA1HA12110.1°109.5°
NCAB114.8°109.4°
NCACB108.4°109.5°
CANH118.1°120.0°
NCAHA106.5°109.5°
BCACB109.3°109.5°
CABOB1112.6°109.5°
CABOB2111.1°109.5°
CABOX0117.8°109.5°
BCAHA105.5°109.5°
CBCAHA112.3°109.5°
CACBHB1C109.5°109.5°
CACBHB2C109.5°109.5°
CACBHB3C109.5°109.5°
OB1BOB2107.7°109.4°
OB1BOX0100.5°109.5°
BOB1HB1109.5°114.0°
OB2BOX0106.3°109.5°
BOB2HB2109.5°114.0°
BOX0HX0109.5°114.0°
CA1CB1CG1112.1°109.4°
CB1CA1HA11109.9°109.5°
CB1CA1HA12110.1°109.4°
CA1CB1HB11108.6°109.5°
CA1CB1HB12108.0°109.5°
CB1CG1CD1108.7°109.5°
CG1CB1HB11108.6°109.5°
CG1CB1HB12108.0°109.4°
CB1CG1HG11109.7°109.5°
CB1CG1HG12109.9°109.4°
CG1CD1CE1116.7°109.4°
CD1CG1HG11109.7°109.5°
CD1CG1HG12109.9°109.5°
CG1CD1HD11107.2°109.5°
CG1CD1HD12105.5°109.5°
CD1CE1NZ1107.2°109.5°
CD1CE1CZ1113.3°109.5°
CE1CD1HD11107.1°109.5°
CE1CD1HD12105.5°109.5°
CD1CE1HE1108.4°109.5°
NZ1CE1CZ1109.2°109.5°
NZ1CE1HE1112.5°109.5°
CE1NZ1HZ11109.5°111.0°
CE1NZ1HZ12109.5°111.0°
CE1CZ1O119.5°120.0°
CE1CZ1OH1118.5°120.0°
CZ1CE1HE1106.3°109.4°
OCZ1OH1122.0°120.1°
CZ1OHB109.5°116.9°
HA11CA1HA12108.6°109.5°
HB1CCBHB2C109.5°109.5°
HB1CCBHB3C109.5°109.4°
HB2CCBHB3C109.5°109.5°
HB11CB1HB12111.5°109.5°
HG11CG1HG12108.9°109.5°
HD11CD1HD12115.3°109.5°
HZ11NZ1HZ12109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1NCA1179.2°179.7°
O1C1NCA1.1°0.1°
O1C1CA1CB190.8°0.1°
O1C1NH178.8°179.9°
O1C1CA1HA11149.1°120.0°
O1C1CA1HA1229.6°120.0°
C1NCAH180.0°179.9°
C1NCAB123.9°105.0°
C1NCACB113.5°135.0°
NC1CA1CB189.9°179.7°
NC1CA1HA1130.1°60.3°
NC1CA1HA12149.7°59.7°
C1NCAHA7.5°14.9°
CA1C1NCA179.6°179.8°
C1CA1CB1HA11120.0°120.0°
C1CA1CB1HA12120.5°119.9°
C1CA1CB1CG1179.1°180.0°
CA1C1NH0.4°0.4°
C1CA1HA11HA12120.5°120.0°
C1CA1CB1HB1160.9°60.0°
C1CA1CB1HB1260.2°60.1°
NCABCB122.1°120.0°
NCABHA116.9°120.0°
NCACBHA117.4°120.0°
NCABOB150.0°60.0°
NCABOB270.9°180.0°
NCABOX0166.2°60.0°
NCACBHB1C148.5°60.0°
NCACBHB2C91.6°179.9°
NCACBHB3C28.4°59.9°
BCACBHA116.8°120.0°
CABOB1OB2122.8°120.0°
CABOB1OX0126.2°120.0°
CABOB2OX0129.3°120.0°
BCANH56.1°75.1°
BCACBHB1C85.7°180.0°
BCACBHB2C34.3°60.0°
BCACBHB3C154.3°60.0°
CABOB1HB1165.3°60.0°
CABOB2HB288.6°60.0°
CABOX0HX0103.8°180.0°
CBCABOB172.1°60.0°
CBCABOB2167.0°60.0°
CBCABOX044.1°180.0°
CBCANH66.5°44.9°
CACBHB1CHB2C120.0°120.0°
CACBHB1CHB3C120.0°120.0°
CACBHB2CHB3C120.0°120.0°
OB1BOB2OX0106.9°120.0°
OB1BCAHA166.9°180.0°
OB1BOB2HB235.2°180.0°
OB1BOX0HX0133.6°60.0°
OB2BCAHA46.1°60.0°
OB2BOB1HB171.9°180.0°
OB2BOX0HX021.5°60.0°
OX0BCAHA76.9°60.0°
OX0BOB1HB139.1°60.0°
OX0BOB2HB2142.1°60.0°
CA1CB1CG1HB11120.0°120.0°
CA1CB1CG1HB12118.9°119.9°
CA1CB1CG1CD1170.3°180.0°
CB1CA1HA11HA12120.5°120.0°
CA1CB1HB11HB12118.9°120.0°
CA1CB1CG1HG1169.7°59.9°
CA1CB1CG1HG1250.0°60.1°
CB1CG1CD1HG11120.0°120.0°
CB1CG1CD1HG12120.3°119.9°
CB1CG1CD1CE1170.0°180.0°
CG1CB1CA1HA1159.1°60.0°
CG1CB1CA1HA1260.4°60.1°
CG1CB1HB11HB12118.9°120.0°
CB1CG1HG11HG12120.3°119.9°
CB1CG1CD1HD1170.0°60.0°
CB1CG1CD1HD1253.4°60.0°
CG1CD1CE1HD11120.0°120.0°
CG1CD1CE1HD12116.7°120.0°
CG1CD1CE1NZ1171.6°65.0°
CG1CD1CE1CZ151.1°175.0°
CD1CG1CB1HB1150.3°60.0°
CD1CG1CB1HB1270.8°60.0°
CD1CG1HG11HG12120.3°120.0°
CG1CD1HD11HD12117.1°120.0°
CG1CD1CE1HE166.7°55.1°
CD1CE1NZ1CZ1123.1°120.0°
CD1CE1NZ1HE1119.0°120.1°
CD1CE1CZ1HE1118.9°120.0°
CD1CE1CZ1O83.3°79.9°
CD1CE1CZ1OH198.0°100.0°
CE1CD1CG1HG1150.1°60.0°
CE1CD1CG1HG1269.7°60.0°
CE1CD1HD11HD12117.0°120.0°
CD1CE1NZ1HZ1116.8°60.0°
CD1CE1NZ1HZ12103.2°176.1°
NZ1CE1CZ1HE1121.6°120.0°
NZ1CE1CZ1O157.3°160.0°
NZ1CE1CZ1OH121.5°20.0°
NZ1CE1CD1HD1168.4°55.0°
NZ1CE1CD1HD1254.9°175.0°
CE1NZ1HZ11HZ12120.0°123.9°
CE1CZ1OOH1178.7°179.9°
CZ1CE1CD1HD11171.1°65.0°
CZ1CE1CD1HD1265.6°55.0°
CZ1CE1NZ1HZ11139.9°60.0°
CZ1CE1NZ1HZ1219.9°63.9°
CE1CZ1OHB178.7°180.0°
OCZ1CE1HE135.6°40.0°
OH1CZ1CE1HE1143.1°140.0°
OH1CZ1OHB0.0°0.1°
HNCAHA172.5°164.9°
HA11CA1CB1HB11179.1°180.0°
HA11CA1CB1HB1259.8°59.9°
HA12CA1CB1HB1159.6°60.0°
HA12CA1CB1HB12179.3°180.0°
HACACBHB1C31.1°60.0°
HACACBHB2C151.0°60.0°
HACACBHB3C88.9°180.0°
HB1CCBHB2CHB3C120.0°120.0°
HB11CB1CG1HG11170.3°180.0°
HB11CB1CG1HG1270.0°60.0°
HB12CB1CG1HG1149.2°60.0°
HB12CB1CG1HG12168.9°180.0°
HG11CG1CD1HD11170.1°180.0°
HG11CG1CD1HD1266.6°60.0°
HG12CG1CD1HD1150.3°60.0°
HG12CG1CD1HD12173.7°180.0°
HD11CD1CE1HE153.3°175.1°
HD12CD1CE1HE1176.6°64.9°
HE1CE1NZ1HZ11102.3°179.9°
HE1CE1NZ1HZ12137.8°56.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon