Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

BM9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.36Å1.28ÅAromatic
C1C8sing1.39Å1.40ÅAromatic
C1S11sing1.76Å1.50Å
C2C9sing1.41Å1.37ÅAromatic
C2H2sing1.08Å1.08Å
C3C4doub1.36Å1.37ÅAromatic
C3C9sing1.40Å1.48ÅAromatic
C3H3sing1.08Å1.08Å
C4C5sing1.39Å1.34ÅAromatic
C4H4sing1.08Å1.08Å
C5C6doub1.36Å1.31ÅAromatic
C5H5sing1.08Å1.08Å
C6C10sing1.40Å1.34ÅAromatic
C6H6sing1.08Å1.08Å
C7C8doub1.36Å1.33ÅAromatic
C7C10sing1.41Å1.41ÅAromatic
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C9C10doub1.42Å1.35ÅAromatic
S11O12doub1.42Å1.41Å
S11O13doub1.42Å1.51Å
S11N14sing1.66Å1.87Å
N14C15sing1.46Å1.25Å
N14HN4sing0.97Å1.00Å
C15C16sing1.53Å1.46Å
C15C18sing1.51Å1.64Å
C15H15sing1.09Å1.10Å
C16O17sing1.43Å1.57Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
O17HO7sing0.97Å0.95Å
C18O19doub1.21Å1.41Å
C18N20sing1.35Å1.12Å
N20C21sing1.47Å1.38Å
N20C24sing1.47Å1.38Å
C21C22sing1.55Å1.55Å
C21H211sing1.09Å1.10Å
C21H212sing1.09Å1.10Å
C22C23sing1.55Å1.25Å
C22H221sing1.09Å1.10Å
C22H222sing1.09Å1.10Å
C23C24sing1.54Å1.58Å
C23H231sing1.09Å1.10Å
C23H232sing1.09Å1.10Å
C24C25sing1.53Å1.57Å
C24H24sing1.09Å1.10Å
C25N26sing1.46Å1.60Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
N26C27sing1.35Å1.19Å
N26HN6sing0.97Å1.00Å
C27O28doub1.21Å1.12Å
C27C29sing1.51Å1.52Å
C29C30sing1.53Å1.47Å
C29C34sing1.53Å1.43Å
C29H29sing1.09Å1.10Å
C30N31sing1.47Å1.37Å
C30H301sing1.09Å1.10Å
C30H302sing1.09Å1.10Å
N31C32sing1.47Å1.23Å
N31C35sing1.38Å1.39Å
C32C33sing1.53Å1.20Å
C32H321sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
C33C34sing1.53Å1.41Å
C33H331sing1.09Å1.10Å
C33H332sing1.09Å1.10Å
C34H341sing1.09Å1.10Å
C34H342sing1.09Å1.10Å
C35N37doub1.30Å1.34Å
C35N36sing1.38Å1.41Å
N37HN7sing0.97Å1.00Å
N36HN61sing0.97Å1.00Å
N36HN62sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C8119.9°121.0°
C2C1S11119.7°119.5°
C1C2C9121.6°119.7°
C1C2H2119.2°120.2°
C8C1S11120.3°119.5°
C1C8C7121.2°121.0°
C1C8H8119.4°119.5°
C1S11O12121.3°106.4°
C1S11O13114.8°106.4°
C1S11N1498.9°107.2°
C9C2H2119.2°120.2°
C2C9C3123.0°121.3°
C2C9C10119.8°119.3°
C4C3C9120.0°119.6°
C4C3H3120.0°120.2°
C3C4C5118.6°121.0°
C3C4H4120.7°119.5°
C9C3H3120.0°120.2°
C3C9C10117.2°119.4°
C5C4H4120.7°119.4°
C4C5C6120.0°120.9°
C4C5H5120.0°119.6°
C6C5H5120.0°119.5°
C5C6C10126.3°119.6°
C5C6H6116.9°120.1°
C10C6H6116.8°120.2°
C6C10C7122.6°121.3°
C6C10C9117.7°119.4°
C8C7C10117.9°119.7°
C8C7H7121.1°120.2°
C7C8H8119.4°119.5°
C10C7H7121.0°120.2°
C7C10C9119.4°119.4°
O12S11O13101.7°123.2°
O12S11N14104.4°106.4°
O13S11N14116.0°106.4°
S11N14C15136.1°120.0°
S11N14HN4101.4°120.1°
C15N14HN4101.4°120.0°
N14C15C16117.4°109.5°
N14C15C18103.3°109.5°
N14C15H15106.4°109.5°
C16C15C18102.0°109.5°
C16C15H15107.7°109.5°
C15C16O17110.4°109.5°
C15C16H161109.1°109.4°
C15C16H162109.2°109.4°
C18C15H15120.8°109.4°
C15C18O19115.0°120.0°
C15C18N20126.1°120.0°
O17C16H161109.2°109.5°
O17C16H162109.1°109.5°
C16O17HO7109.5°114.0°
H161C16H162109.8°109.4°
O19C18N20118.9°120.0°
C18N20C21122.6°125.6°
C18N20C24136.4°125.7°
C21N20C24100.7°108.7°
N20C21C22108.3°104.8°
N20C21H211109.8°110.3°
N20C21H212109.8°110.3°
N20C24C23112.9°107.2°
N20C24C25112.7°109.9°
N20C24H24104.2°109.8°
C22C21H211109.9°110.4°
C22C21H212109.9°110.4°
C21C22C23109.7°101.6°
C21C22H221109.4°111.0°
C21C22H222109.4°111.0°
H211C21H212109.1°110.5°
C23C22H221109.4°111.0°
C23C22H222109.4°111.0°
C22C23C2496.9°103.0°
C22C23H231113.9°110.7°
C22C23H232113.9°110.7°
H221C22H222109.5°110.9°
C24C23H231113.9°110.8°
C24C23H232113.9°110.5°
C23C24C25107.8°110.0°
C23C24H24109.5°109.7°
H231C23H232104.7°110.8°
C25C24H24109.7°110.0°
C24C25N26102.1°109.4°
C24C25H251112.0°109.4°
C24C25H252112.0°109.5°
N26C25H251112.0°109.5°
N26C25H252112.0°109.5°
C25N26C27130.8°120.0°
C25N26HN6114.6°120.0°
H251C25H252106.9°109.5°
C27N26HN6114.6°120.0°
N26C27O28105.3°120.0°
N26C27C29138.7°120.0°
O28C27C29114.0°120.0°
C27C29C30110.1°109.5°
C27C29C34117.8°109.5°
C27C29H29102.8°109.5°
C30C29C34108.5°109.3°
C30C29H29113.2°109.5°
C29C30N31105.3°108.7°
C29C30H301110.9°109.6°
C29C30H302110.9°109.5°
C34C29H29104.5°109.6°
C29C34C33109.2°109.5°
C29C34H341109.6°109.4°
C29C34H342109.6°109.5°
N31C30H301110.9°109.6°
N31C30H302110.9°109.6°
C30N31C32116.2°118.7°
C30N31C35124.1°120.6°
H301C30H302108.0°109.7°
C32N31C35119.0°120.6°
N31C32C33124.5°108.8°
N31C32H321104.7°109.6°
N31C32H322104.7°109.6°
N31C35N37125.3°120.0°
N31C35N36118.5°119.9°
C33C32H321104.7°109.6°
C33C32H322104.7°109.6°
C32C33C34109.7°109.3°
C32C33H331109.4°109.5°
C32C33H332109.4°109.5°
H321C32H322113.8°109.7°
C34C33H331109.4°109.5°
C34C33H332109.4°109.5°
C33C34H341109.6°109.5°
C33C34H342109.6°109.5°
H331C33H332109.5°109.5°
H341C34H342109.3°109.4°
N37C35N36116.1°120.0°
C35N37HN7112.0°120.0°
C35N36HN61120.0°120.0°
C35N36HN62120.0°120.0°
HN61N36HN62120.1°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C8S11176.8°179.7°
C1C2C9H2180.0°180.0°
C1C2C9C3177.0°180.0°
C2C1C8C71.0°0.0°
C2C1C8H8179.0°180.0°
C1C2C9C105.1°0.1°
C2C1S11O12158.8°156.5°
C2C1S11O1335.9°23.5°
C2C1S11N1488.3°90.0°
C8C1C2C91.8°0.0°
C8C1C2H2178.2°180.0°
C1C8C7H8180.0°180.0°
C1C8C7C100.3°0.0°
C1C8C7H7179.7°179.9°
C8C1S11O1224.4°23.2°
C8C1S11O13147.3°156.2°
C8C1S11N1488.6°90.3°
S11C1C2C9178.6°179.7°
S11C1C2H21.4°0.3°
S11C1C8C7175.8°179.7°
S11C1C8H84.2°0.3°
C1S11O12O13128.9°123.0°
C1S11O12N14110.1°114.1°
C1S11O13N14114.5°114.1°
C1S11N14C1590.3°65.0°
C1S11N14HN4149.7°115.0°
C2C9C3C4178.5°180.0°
C2C9C3C10177.9°179.9°
C2C9C3H31.5°0.0°
C2C9C10C6179.6°180.0°
C2C9C10C75.7°0.1°
H2C2C9C33.0°0.0°
H2C2C9C10174.9°180.0°
C4C3C9H3180.0°180.0°
C3C4C5H4180.0°180.0°
C3C4C5C63.0°0.0°
C3C4C5H5176.9°180.0°
C4C3C9C103.6°0.0°
C9C3C4C54.3°0.0°
C9C3C4H4175.7°180.0°
C3C9C10C61.6°0.1°
C3C9C10C7176.3°179.9°
H3C3C4C5175.7°180.0°
H3C3C4H44.3°0.0°
H3C3C9C10176.4°180.0°
C4C5C6H5180.0°180.0°
C4C5C6C101.1°0.1°
C4C5C6H6178.9°180.0°
H4C4C5C6177.0°180.0°
H4C4C5H53.1°0.0°
C5C6C10H6180.0°179.9°
C5C6C10C7175.0°180.0°
C5C6C10C90.4°0.1°
H5C5C6C10178.9°180.0°
H5C5C6H61.1°0.0°
C6C10C7C8177.4°180.0°
C6C10C7C9174.4°179.9°
C6C10C7H72.6°0.1°
H6C6C10C75.0°0.1°
H6C6C10C9179.6°180.0°
C8C7C10H7180.0°179.9°
C8C7C10C93.0°0.1°
C10C7C8H8179.7°179.9°
H7C7C8H80.3°0.0°
H7C7C10C9177.0°180.0°
O12S11O13N14112.6°122.9°
O12S11N14C15144.0°48.5°
O12S11N14HN424.0°131.4°
O13S11N14C1533.0°178.6°
O13S11N14HN487.0°1.4°
S11N14C15HN4120.0°180.0°
S11N14C15C16149.0°95.0°
S11N14C15C1899.8°145.0°
S11N14C15H1528.4°25.1°
N14C15C16C18112.0°120.0°
N14C15C16H15119.9°120.0°
N14C15C18H15118.6°120.0°
N14C15C16O1767.4°65.0°
N14C15C16H16152.6°175.0°
N14C15C16H162172.6°55.1°
N14C15C18O1954.3°0.0°
N14C15C18N20126.6°180.0°
HN4N14C15C1629.0°85.0°
HN4N14C15C18140.2°35.0°
HN4N14C15H1591.6°155.0°
C16C15C18H15119.2°120.0°
C15C16O17H161120.0°120.0°
C15C16O17H162120.0°120.0°
C15C16H161H162119.6°119.9°
C15C16O17HO7180.0°180.0°
C16C15C18O1967.8°120.0°
C16C15C18N20111.2°60.0°
C18C15C16O17179.4°55.0°
C18C15C16H16159.4°65.0°
C18C15C16H16260.6°175.1°
C15C18O19N20179.1°180.0°
C15C18N20C2115.4°5.0°
C15C18N20C24172.4°174.6°
H15C15C16O1752.5°175.0°
H15C15C16H161172.5°54.9°
H15C15C16H16267.5°65.0°
H15C15C18O19173.0°120.0°
H15C15C18N208.0°60.0°
O17C16H161H162119.6°120.1°
H161C16O17HO760.0°60.0°
H162C16O17HO760.0°60.0°
O19C18N20C21165.6°175.0°
O19C18N20C246.6°5.4°
C18N20C21C24174.6°179.6°
C18N20C21C22175.7°155.9°
C18N20C21H21155.7°37.1°
C18N20C21H21264.3°85.2°
C18N20C24C23155.3°178.9°
C18N20C24C2582.3°61.6°
C18N20C24H2436.6°59.7°
N20C21C22H211120.0°118.8°
N20C21C22H212120.0°118.8°
N20C21H211H212120.4°122.3°
N20C21C22C2324.9°37.1°
N20C21C22H221144.8°81.1°
N20C21C22H22295.2°155.1°
C21N20C24C2318.0°1.5°
C21N20C24C25104.4°118.1°
C21N20C24H24136.7°120.7°
C24N20C21C221.2°24.4°
C24N20C21H211118.8°143.2°
C24N20C21H212121.2°94.4°
N20C24C23C2233.3°21.8°
N20C24C23C25125.1°119.5°
N20C24C23H24115.6°119.3°
N20C24C23H23186.7°140.3°
N20C24C23H232153.3°96.5°
N20C24C25H24115.6°121.1°
N20C24C25N2670.3°175.9°
N20C24C25H251169.7°64.1°
N20C24C25H25249.7°55.9°
C22C21H211H212120.5°122.4°
C21C22C23H221120.0°118.1°
C21C22C23H222120.0°118.1°
C21C22H221H222119.9°123.9°
C21C22C23C2431.0°35.3°
C21C22C23H23188.9°153.9°
C21C22C23H232151.0°82.8°
H211C21C22C2395.1°155.8°
H211C21C22H22124.9°37.7°
H211C21C22H222144.8°86.1°
H212C21C22C23144.8°81.8°
H212C21C22H22195.2°160.1°
H212C21C22H22224.8°36.3°
C23C22H221H222119.9°123.9°
C22C23C24H231120.0°118.5°
C22C23C24H232120.0°118.3°
C22C23H231H232125.1°123.3°
C22C23C24C2591.9°141.3°
C22C23C24H24148.8°97.5°
H221C22C23C24151.0°82.8°
H221C22C23H23131.1°35.8°
H221C22C23H23289.0°159.0°
H222C22C23C2489.0°153.4°
H222C22C23H231151.1°88.1°
H222C22C23H23231.0°35.2°
C24C23H231H232125.0°123.0°
C23C24C25H24119.1°121.0°
C23C24C25N26164.4°66.2°
C23C24C25H25144.4°53.8°
C23C24C25H25275.6°173.7°
H231C23C24C25148.2°100.2°
H231C23C24H2428.9°21.0°
H232C23C24C2528.1°23.0°
H232C23C24H2491.1°144.2°
C24C25N26H251120.0°120.0°
C24C25N26H252120.0°120.0°
C24C25H251H252123.0°120.0°
C24C25N26C27106.5°175.1°
C24C25N26HN673.5°4.9°
H24C24C25N2645.3°54.8°
H24C24C25H25174.7°174.8°
H24C24C25H252165.3°65.2°
N26C25H251H252123.0°120.1°
C25N26C27HN6180.0°180.0°
C25N26C27O281.1°0.0°
C25N26C27C29162.8°180.0°
H251C25N26C27133.5°64.9°
H251C25N26HN646.5°115.1°
H252C25N26C2713.5°55.1°
H252C25N26HN6166.5°124.9°
N26C27O28C29166.9°179.9°
N26C27C29C30163.1°60.0°
N26C27C29C3471.9°179.8°
N26C27C29H2942.3°60.1°
HN6N26C27O28178.9°180.0°
HN6N26C27C2917.2°0.0°
O28C27C29C302.5°120.0°
O28C27C29C34127.5°0.1°
O28C27C29H29118.3°120.0°
C27C29C30C34130.2°119.9°
C27C29C30H29114.3°120.0°
C27C29C34H29113.2°120.1°
C27C29C30N31175.9°174.6°
C27C29C30H30164.1°54.8°
C27C29C30H30255.9°65.7°
C27C29C34C33176.9°178.6°
C27C29C34H34156.9°58.6°
C27C29C34H34263.0°61.3°
C30C29C34H29121.0°120.0°
C29C30N31H301120.0°119.8°
C29C30N31H302120.0°119.7°
C29C30H301H302121.7°120.4°
C29C30N31C3248.8°53.6°
C29C30N31C35122.1°126.4°
C30C29C34C3357.3°61.4°
C30C29C34H341177.3°178.5°
C30C29C34H34262.7°58.6°
C34C29C30N3154.0°54.7°
C34C29C30H30166.0°65.1°
C34C29C30H302173.9°174.4°
C29C34C33C3251.7°61.4°
C29C34C33H341120.0°120.0°
C29C34C33H342120.0°120.0°
C29C34C33H331171.7°178.7°
C29C34C33H33268.4°58.5°
C29C34H341H342120.1°119.9°
H29C29C30N3161.5°65.4°
H29C29C30H301178.5°174.8°
H29C29C30H30258.5°54.4°
H29C29C34C3363.7°58.6°
H29C29C34H34156.3°61.4°
H29C29C34H342176.3°178.6°
N31C30H301H302121.7°120.4°
C30N31C32C35171.4°180.0°
C30N31C32C3351.7°53.6°
C30N31C32H32168.3°66.2°
C30N31C32H322171.7°173.4°
C30N31C35N370.0°5.1°
C30N31C35N36176.2°174.9°
H301C30N31C3271.2°66.2°
H301C30N31C35118.0°113.8°
H302C30N31C32168.8°173.3°
H302C30N31C352.1°6.7°
N31C32C33H321120.0°119.8°
N31C32C33H322120.0°119.8°
N31C32H321H322113.8°120.3°
N31C32C33C3450.2°54.6°
N31C32C33H331170.2°174.6°
N31C32C33H33269.8°65.3°
C32N31C35N37170.6°174.8°
C32N31C35N3613.2°5.2°
C35N31C32C33119.7°126.4°
C35N31C32H321120.4°113.8°
C35N31C32H3220.4°6.6°
N31C35N37N36176.2°180.0°
N31C35N37HN7176.2°180.0°
N31C35N36HN61176.5°5.3°
N31C35N36HN623.5°174.7°
C33C32H321H322113.8°120.4°
C32C33C34H331120.0°119.9°
C32C33C34H332120.0°119.9°
C32C33H331H332119.9°120.1°
C32C33C34H341171.7°178.6°
C32C33C34H34268.4°58.6°
H321C32C33C3469.8°65.1°
H321C32C33H33150.2°54.8°
H321C32C33H332170.2°174.9°
H322C32C33C34170.2°174.4°
H322C32C33H33169.8°65.6°
H322C32C33H33250.2°54.5°
C34C33H331H332119.9°120.1°
C33C34H341H342120.1°120.0°
H331C33C34H34168.3°58.7°
H331C33C34H34251.6°61.3°
H332C33C34H34151.7°61.5°
H332C33C34H342171.6°178.6°
N37C35N36HN610.0°174.7°
N37C35N36HN62180.0°5.2°
N36C35N37HN70.0°0.0°
C35N36HN61HN62180.0°180.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon