AXI
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O81 | C80 | doub | 1.22Å | 1.25Å | |
C80 | N82 | sing | 1.35Å | 1.35Å | |
C80 | C23 | sing | 1.47Å | 1.49Å | |
N82 | C88 | sing | 1.46Å | 1.46Å | |
C23 | C22 | sing | 1.40Å | 1.43Å | Aromatic |
C23 | C18 | doub | 1.40Å | 1.44Å | Aromatic |
C22 | C21 | doub | 1.38Å | 1.42Å | Aromatic |
C21 | C20 | sing | 1.39Å | 1.41Å | Aromatic |
C20 | C19 | doub | 1.38Å | 1.42Å | Aromatic |
C18 | C19 | sing | 1.39Å | 1.43Å | Aromatic |
C18 | S24 | sing | 1.76Å | 1.75Å | |
S24 | C07 | sing | 1.76Å | 1.74Å | |
C07 | C08 | sing | 1.40Å | 1.42Å | Aromatic |
C07 | C12 | doub | 1.38Å | 1.43Å | Aromatic |
C08 | C09 | doub | 1.36Å | 1.44Å | Aromatic |
C09 | C10 | sing | 1.40Å | 1.43Å | Aromatic |
C12 | C11 | sing | 1.39Å | 1.39Å | Aromatic |
C11 | N15 | sing | 1.37Å | 1.39Å | Aromatic |
C11 | C10 | doub | 1.41Å | 1.39Å | Aromatic |
N15 | N14 | sing | 1.40Å | 1.29Å | Aromatic |
N14 | C13 | doub | 1.31Å | 1.28Å | Aromatic |
C13 | C10 | sing | 1.47Å | 1.45Å | Aromatic |
C13 | C16 | sing | 1.47Å | 1.47Å | |
C16 | C17 | doub | 1.34Å | 1.40Å | |
C17 | C02 | sing | 1.47Å | 1.50Å | |
C02 | N03 | doub | 1.33Å | 1.35Å | Aromatic |
C02 | C01 | sing | 1.40Å | 1.42Å | Aromatic |
N03 | C04 | sing | 1.32Å | 1.36Å | Aromatic |
C04 | C05 | doub | 1.38Å | 1.41Å | Aromatic |
C05 | C06 | sing | 1.39Å | 1.41Å | Aromatic |
C06 | C01 | doub | 1.38Å | 1.42Å | Aromatic |
N82 | H82 | sing | 0.97Å | 1.00Å | |
C88 | H881 | sing | 1.09Å | 1.10Å | |
C88 | H882 | sing | 1.09Å | 1.10Å | |
C88 | H883 | sing | 1.09Å | 1.10Å | |
C22 | H22 | sing | 1.08Å | 1.08Å | |
C21 | H21 | sing | 1.08Å | 1.08Å | |
C20 | H20 | sing | 1.08Å | 1.08Å | |
C19 | H19 | sing | 1.08Å | 1.08Å | |
C08 | H08 | sing | 1.08Å | 1.08Å | |
C12 | H12 | sing | 1.08Å | 1.08Å | |
C09 | H09 | sing | 1.08Å | 1.08Å | |
C16 | H16 | sing | 1.08Å | 1.08Å | |
C17 | H17 | sing | 1.08Å | 1.08Å | |
C01 | H01 | sing | 1.08Å | 1.08Å | |
C04 | H04 | sing | 1.08Å | 1.08Å | |
C05 | H05 | sing | 1.08Å | 1.08Å | |
C06 | H06 | sing | 1.08Å | 1.08Å | |
N15 | H1 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O81 | C80 | N82 | 120.6° | 120.0° |
O81 | C80 | C23 | 119.0° | 120.0° |
N82 | C80 | C23 | 120.3° | 120.1° |
C80 | N82 | C88 | 124.1° | 120.0° |
C80 | N82 | H82 | 118.0° | 120.0° |
C80 | C23 | C22 | 116.6° | 120.2° |
C80 | C23 | C18 | 124.5° | 120.3° |
C88 | N82 | H82 | 118.0° | 120.0° |
N82 | C88 | H881 | 109.5° | 109.5° |
N82 | C88 | H882 | 109.4° | 109.4° |
N82 | C88 | H883 | 109.5° | 109.5° |
C22 | C23 | C18 | 119.0° | 119.5° |
C23 | C22 | C21 | 122.7° | 119.9° |
C23 | C22 | H22 | 118.7° | 120.0° |
C23 | C18 | C19 | 117.8° | 119.7° |
C23 | C18 | S24 | 123.7° | 120.2° |
C22 | C21 | C20 | 118.2° | 120.4° |
C21 | C22 | H22 | 118.6° | 120.0° |
C22 | C21 | H21 | 120.9° | 119.8° |
C21 | C20 | C19 | 120.3° | 120.4° |
C20 | C21 | H21 | 120.9° | 119.8° |
C21 | C20 | H20 | 119.9° | 119.8° |
C20 | C19 | C18 | 122.0° | 120.1° |
C19 | C20 | H20 | 119.8° | 119.8° |
C20 | C19 | H19 | 119.0° | 119.9° |
C19 | C18 | S24 | 118.4° | 120.2° |
C18 | C19 | H19 | 119.0° | 120.0° |
C18 | S24 | C07 | 108.1° | 103.0° |
S24 | C07 | C08 | 120.2° | 119.7° |
S24 | C07 | C12 | 120.1° | 119.8° |
C08 | C07 | C12 | 119.6° | 120.5° |
C07 | C08 | C09 | 121.3° | 120.5° |
C07 | C08 | H08 | 119.3° | 119.7° |
C07 | C12 | C11 | 118.9° | 119.6° |
C07 | C12 | H12 | 120.5° | 120.2° |
C08 | C09 | C10 | 116.6° | 119.9° |
C09 | C08 | H08 | 119.4° | 119.8° |
C08 | C09 | H09 | 121.7° | 120.0° |
C09 | C10 | C11 | 121.7° | 120.0° |
C09 | C10 | C13 | 135.7° | 133.8° |
C10 | C09 | H09 | 121.7° | 120.1° |
C12 | C11 | N15 | 130.4° | 133.5° |
C12 | C11 | C10 | 121.9° | 119.5° |
C11 | C12 | H12 | 120.6° | 120.1° |
N15 | C11 | C10 | 107.7° | 107.0° |
C11 | N15 | N14 | 109.1° | 109.4° |
C11 | N15 | H1 | 125.4° | 125.4° |
C11 | C10 | C13 | 102.6° | 106.2° |
N15 | N14 | C13 | 111.4° | 109.9° |
N14 | N15 | H1 | 125.5° | 125.3° |
N14 | C13 | C10 | 109.2° | 107.5° |
N14 | C13 | C16 | 121.1° | 126.2° |
C10 | C13 | C16 | 129.6° | 126.2° |
C13 | C16 | C17 | 128.1° | 120.0° |
C13 | C16 | H16 | 115.9° | 120.0° |
C16 | C17 | C02 | 123.5° | 120.0° |
C17 | C16 | H16 | 116.0° | 120.0° |
C16 | C17 | H17 | 118.3° | 120.0° |
C17 | C02 | N03 | 115.1° | 119.7° |
C17 | C02 | C01 | 122.7° | 119.8° |
C02 | C17 | H17 | 118.3° | 120.0° |
N03 | C02 | C01 | 122.1° | 120.5° |
C02 | N03 | C04 | 120.6° | 121.6° |
C02 | C01 | C06 | 117.5° | 119.1° |
C02 | C01 | H01 | 121.2° | 120.5° |
N03 | C04 | C05 | 120.9° | 120.9° |
N03 | C04 | H04 | 119.5° | 119.5° |
C04 | C05 | C06 | 119.1° | 119.4° |
C05 | C04 | H04 | 119.5° | 119.5° |
C04 | C05 | H05 | 120.4° | 120.3° |
C05 | C06 | C01 | 119.8° | 118.5° |
C06 | C05 | H05 | 120.4° | 120.3° |
C05 | C06 | H06 | 120.1° | 120.7° |
C06 | C01 | H01 | 121.3° | 120.5° |
C01 | C06 | H06 | 120.1° | 120.8° |
H881 | C88 | H882 | 109.5° | 109.5° |
H881 | C88 | H883 | 109.5° | 109.5° |
H882 | C88 | H883 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O81 | C80 | N82 | C23 | 178.6° | 179.6° |
O81 | C80 | N82 | C88 | 5.1° | 0.1° |
O81 | C80 | C23 | C22 | 141.4° | 180.0° |
O81 | C80 | C23 | C18 | 37.6° | 0.2° |
O81 | C80 | N82 | H82 | 174.8° | 180.0° |
C80 | N82 | C88 | H82 | 180.0° | 179.9° |
N82 | C80 | C23 | C22 | 37.2° | 0.3° |
N82 | C80 | C23 | C18 | 143.8° | 179.4° |
C80 | N82 | C88 | H881 | 180.0° | 59.9° |
C80 | N82 | C88 | H882 | 60.0° | 60.1° |
C80 | N82 | C88 | H883 | 60.0° | 180.0° |
C23 | C80 | N82 | C88 | 173.5° | 179.7° |
C80 | C23 | C22 | C18 | 179.1° | 179.8° |
C80 | C23 | C22 | C21 | 179.8° | 180.0° |
C80 | C23 | C18 | C19 | 179.9° | 179.7° |
C80 | C23 | C18 | S24 | 1.9° | 0.1° |
C23 | C80 | N82 | H82 | 6.5° | 0.4° |
C80 | C23 | C22 | H22 | 0.2° | 0.0° |
N82 | C88 | H881 | H882 | 120.0° | 120.0° |
N82 | C88 | H881 | H883 | 120.0° | 120.1° |
N82 | C88 | H882 | H883 | 120.0° | 120.0° |
C23 | C22 | C21 | H22 | 180.0° | 180.0° |
C23 | C22 | C21 | C20 | 0.7° | 0.0° |
C22 | C23 | C18 | C19 | 1.1° | 0.5° |
C22 | C23 | C18 | S24 | 179.1° | 179.7° |
C23 | C22 | C21 | H21 | 179.2° | 180.0° |
C18 | C23 | C22 | C21 | 0.7° | 0.3° |
C23 | C18 | C19 | C20 | 1.7° | 0.5° |
C23 | C18 | C19 | S24 | 178.1° | 179.8° |
C23 | C18 | S24 | C07 | 146.0° | 174.3° |
C18 | C23 | C22 | H22 | 179.3° | 179.7° |
C23 | C18 | C19 | H19 | 178.3° | 179.7° |
C22 | C21 | C20 | H21 | 180.0° | 180.0° |
C22 | C21 | C20 | C19 | 1.2° | 0.0° |
C22 | C21 | C20 | H20 | 178.7° | 180.0° |
C21 | C20 | C19 | H20 | 180.0° | 180.0° |
C21 | C20 | C19 | C18 | 1.7° | 0.3° |
C20 | C21 | C22 | H22 | 179.3° | 180.0° |
C21 | C20 | C19 | H19 | 178.2° | 179.9° |
C20 | C19 | C18 | H19 | 180.0° | 179.8° |
C20 | C19 | C18 | S24 | 179.7° | 179.7° |
C19 | C20 | C21 | H21 | 178.8° | 180.0° |
C19 | C18 | S24 | C07 | 36.1° | 5.5° |
C18 | C19 | C20 | H20 | 178.2° | 179.7° |
C18 | S24 | C07 | C08 | 133.9° | 94.9° |
C18 | S24 | C07 | C12 | 46.0° | 85.4° |
S24 | C18 | C19 | H19 | 0.2° | 0.1° |
S24 | C07 | C08 | C12 | 180.0° | 179.7° |
S24 | C07 | C08 | C09 | 179.4° | 180.0° |
S24 | C07 | C12 | C11 | 179.8° | 179.9° |
S24 | C07 | C08 | H08 | 0.6° | 0.0° |
S24 | C07 | C12 | H12 | 0.3° | 0.0° |
C07 | C08 | C09 | H08 | 180.0° | 180.0° |
C07 | C08 | C09 | C10 | 0.7° | 0.0° |
C08 | C07 | C12 | C11 | 0.3° | 0.2° |
C08 | C07 | C12 | H12 | 179.7° | 179.7° |
C07 | C08 | C09 | H09 | 179.2° | 180.0° |
C12 | C07 | C08 | C09 | 0.7° | 0.3° |
C07 | C12 | C11 | H12 | 180.0° | 180.0° |
C07 | C12 | C11 | N15 | 179.2° | 179.9° |
C07 | C12 | C11 | C10 | 0.0° | 0.0° |
C12 | C07 | C08 | H08 | 179.3° | 179.7° |
C08 | C09 | C10 | H09 | 180.0° | 180.0° |
C08 | C09 | C10 | C11 | 0.5° | 0.2° |
C08 | C09 | C10 | C13 | 178.4° | 179.9° |
C09 | C10 | C11 | C12 | 0.1° | 0.3° |
C09 | C10 | C11 | N15 | 179.3° | 179.8° |
C09 | C10 | C11 | C13 | 178.5° | 179.8° |
C09 | C10 | C13 | N14 | 178.1° | 179.7° |
C09 | C10 | C13 | C16 | 0.7° | 0.2° |
C10 | C09 | C08 | H08 | 179.3° | 180.0° |
C12 | C11 | N15 | C10 | 179.2° | 179.9° |
C12 | C11 | N15 | N14 | 177.9° | 179.9° |
C12 | C11 | C10 | C13 | 178.6° | 179.9° |
C12 | C11 | N15 | H1 | 2.2° | 0.1° |
C11 | N15 | N14 | H1 | 180.0° | 180.0° |
C11 | N15 | N14 | C13 | 1.5° | 0.0° |
N15 | C11 | C10 | C13 | 0.7° | 0.0° |
N15 | C11 | C12 | H12 | 0.8° | 0.1° |
C10 | C11 | N15 | N14 | 1.4° | 0.0° |
C11 | C10 | C13 | N14 | 0.2° | 0.0° |
C11 | C10 | C13 | C16 | 177.5° | 179.9° |
C10 | C11 | C12 | H12 | 180.0° | 180.0° |
C11 | C10 | C09 | H09 | 179.5° | 179.8° |
C10 | C11 | N15 | H1 | 178.6° | 180.0° |
N15 | N14 | C13 | C10 | 1.1° | 0.0° |
N15 | N14 | C13 | C16 | 178.7° | 180.0° |
N14 | C13 | C10 | C16 | 177.3° | 180.0° |
N14 | C13 | C16 | C17 | 176.2° | 0.1° |
N14 | C13 | C16 | H16 | 3.8° | 179.9° |
C13 | N14 | N15 | H1 | 178.4° | 180.0° |
C10 | C13 | C16 | C17 | 6.7° | 180.0° |
C13 | C10 | C09 | H09 | 1.6° | 0.1° |
C10 | C13 | C16 | H16 | 173.3° | 0.0° |
C13 | C16 | C17 | H16 | 180.0° | 180.0° |
C13 | C16 | C17 | C02 | 180.0° | 180.0° |
C13 | C16 | C17 | H17 | 0.0° | 0.1° |
C16 | C17 | C02 | H17 | 180.0° | 179.9° |
C16 | C17 | C02 | N03 | 178.2° | 0.1° |
C16 | C17 | C02 | C01 | 2.1° | 179.7° |
C17 | C02 | N03 | C01 | 179.8° | 179.8° |
C17 | C02 | N03 | C04 | 180.0° | 180.0° |
C17 | C02 | C01 | C06 | 180.0° | 179.7° |
C02 | C17 | C16 | H16 | 0.0° | 0.1° |
C17 | C02 | C01 | H01 | 0.0° | 0.0° |
C02 | N03 | C04 | C05 | 0.3° | 0.0° |
N03 | C02 | C01 | C06 | 0.2° | 0.6° |
N03 | C02 | C17 | H17 | 1.8° | 180.0° |
N03 | C02 | C01 | H01 | 179.8° | 179.8° |
C02 | N03 | C04 | H04 | 179.7° | 180.0° |
C01 | C02 | N03 | C04 | 0.2° | 0.2° |
C02 | C01 | C06 | C05 | 0.2° | 0.6° |
C02 | C01 | C06 | H01 | 180.0° | 179.7° |
C01 | C02 | C17 | H17 | 177.9° | 0.2° |
C02 | C01 | C06 | H06 | 179.8° | 179.7° |
N03 | C04 | C05 | H04 | 180.0° | 180.0° |
N03 | C04 | C05 | C06 | 0.2° | 0.0° |
N03 | C04 | C05 | H05 | 179.7° | 179.9° |
C04 | C05 | C06 | H05 | 180.0° | 179.9° |
C04 | C05 | C06 | C01 | 0.2° | 0.3° |
C04 | C05 | C06 | H06 | 179.8° | 180.0° |
C05 | C06 | C01 | H06 | 180.0° | 179.8° |
C05 | C06 | C01 | H01 | 179.8° | 179.8° |
C06 | C05 | C04 | H04 | 179.8° | 180.0° |
C01 | C06 | C05 | H05 | 179.7° | 179.8° |
H82 | N82 | C88 | H881 | 0.1° | 119.9° |
H82 | N82 | C88 | H882 | 120.0° | 120.1° |
H82 | N82 | C88 | H883 | 120.0° | 0.1° |
H881 | C88 | H882 | H883 | 120.0° | 120.0° |
H22 | C22 | C21 | H21 | 0.8° | 0.0° |
H21 | C21 | C20 | H20 | 1.3° | 0.1° |
H20 | C20 | C19 | H19 | 1.8° | 0.1° |
H08 | C08 | C09 | H09 | 0.7° | 0.0° |
H16 | C16 | C17 | H17 | 180.0° | 179.9° |
H01 | C01 | C06 | H06 | 0.2° | 0.0° |
H04 | C04 | C05 | H05 | 0.3° | 0.1° |
H05 | C05 | C06 | H06 | 0.3° | 0.0° |