AR0
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C2 | sing | 1.53Å | 1.53Å | |
CA | C3 | sing | 1.53Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C2 | O1 | sing | 1.43Å | 1.41Å | |
C2 | C7 | sing | 1.53Å | 1.56Å | |
C3 | C4 | sing | 1.53Å | 1.49Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C3 | H4 | sing | 1.09Å | 1.10Å | |
C4 | C5 | sing | 1.53Å | 1.50Å | |
C4 | H5 | sing | 1.09Å | 1.10Å | |
C4 | H6 | sing | 1.09Å | 1.10Å | |
C5 | N2 | sing | 1.46Å | 1.45Å | |
C5 | H7 | sing | 1.09Å | 1.10Å | |
C5 | H8 | sing | 1.09Å | 1.10Å | |
N2 | C6 | sing | 1.37Å | 1.33Å | |
N2 | H9 | sing | 0.97Å | 1.00Å | |
C6 | N3 | sing | 1.33Å | 1.34Å | |
C6 | N4 | doub | 1.33Å | 1.33Å | |
N3 | H10 | sing | 0.97Å | 1.00Å | |
N3 | H11 | sing | 0.97Å | 1.00Å | |
N4 | H12 | sing | 0.97Å | 1.00Å | |
N4 | H13 | sing | 0.97Å | 1.00Å | |
C7 | N5 | sing | 1.46Å | 1.45Å | |
C7 | H14 | sing | 1.09Å | 1.10Å | |
C7 | H15 | sing | 1.09Å | 1.10Å | |
N5 | C8 | sing | 1.32Å | 1.35Å | Aromatic |
N5 | C12 | doub | 1.32Å | 1.38Å | Aromatic |
C8 | C9 | doub | 1.38Å | 1.38Å | Aromatic |
C8 | H16 | sing | 1.08Å | 1.08Å | |
C9 | C10 | sing | 1.39Å | 1.40Å | Aromatic |
C9 | H17 | sing | 1.08Å | 1.08Å | |
C10 | C11 | doub | 1.39Å | 1.39Å | Aromatic |
C10 | C13 | sing | 1.51Å | 1.52Å | |
C11 | C12 | sing | 1.38Å | 1.40Å | Aromatic |
C11 | H18 | sing | 1.08Å | 1.08Å | |
C12 | H19 | sing | 1.08Å | 1.08Å | |
C13 | C | sing | 1.51Å | 1.51Å | |
C13 | H20 | sing | 1.09Å | 1.10Å | |
C13 | H21 | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
C2 | H24 | sing | 1.09Å | 1.10Å | |
O1 | H25 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | C2 | 109.8° | 109.5° |
N | CA | C3 | 110.2° | 109.5° |
N | CA | HA | 109.1° | 109.5° |
H | N | H2 | 109.4° | 111.0° |
C2 | CA | C3 | 110.5° | 109.5° |
C2 | CA | HA | 108.8° | 109.5° |
CA | C2 | O1 | 106.5° | 109.4° |
CA | C2 | C7 | 110.9° | 109.5° |
CA | C2 | H24 | 110.6° | 109.5° |
C3 | CA | HA | 108.4° | 109.4° |
CA | C3 | C4 | 113.7° | 109.5° |
CA | C3 | H3 | 108.1° | 109.5° |
CA | C3 | H4 | 108.1° | 109.5° |
O1 | C2 | C7 | 109.7° | 109.5° |
O1 | C2 | H24 | 111.7° | 109.4° |
C2 | O1 | H25 | 109.5° | 114.0° |
C2 | C7 | N5 | 120.0° | 109.5° |
C2 | C7 | H14 | 106.1° | 109.5° |
C2 | C7 | H15 | 106.1° | 109.5° |
C7 | C2 | H24 | 107.4° | 109.5° |
C4 | C3 | H3 | 108.1° | 109.5° |
C4 | C3 | H4 | 108.1° | 109.5° |
C3 | C4 | C5 | 111.2° | 109.4° |
C3 | C4 | H5 | 108.9° | 109.5° |
C3 | C4 | H6 | 108.9° | 109.5° |
H3 | C3 | H4 | 110.9° | 109.4° |
C5 | C4 | H5 | 108.9° | 109.5° |
C5 | C4 | H6 | 108.9° | 109.5° |
C4 | C5 | N2 | 110.3° | 109.4° |
C4 | C5 | H7 | 109.2° | 109.4° |
C4 | C5 | H8 | 109.2° | 109.5° |
H5 | C4 | H6 | 110.1° | 109.4° |
N2 | C5 | H7 | 109.2° | 109.5° |
N2 | C5 | H8 | 109.2° | 109.5° |
C5 | N2 | C6 | 124.9° | 120.0° |
C5 | N2 | H9 | 117.5° | 120.1° |
H7 | C5 | H8 | 109.8° | 109.5° |
C6 | N2 | H9 | 117.6° | 119.9° |
N2 | C6 | N3 | 120.1° | 120.0° |
N2 | C6 | N4 | 119.9° | 120.0° |
N3 | C6 | N4 | 120.0° | 120.0° |
C6 | N3 | H10 | 120.0° | 119.9° |
C6 | N3 | H11 | 120.0° | 120.0° |
C6 | N4 | H12 | 120.0° | 120.0° |
C6 | N4 | H13 | 120.0° | 120.1° |
H10 | N3 | H11 | 120.0° | 120.1° |
H12 | N4 | H13 | 120.0° | 120.0° |
N5 | C7 | H14 | 106.1° | 109.5° |
N5 | C7 | H15 | 106.1° | 109.5° |
C7 | N5 | C8 | 118.3° | 119.1° |
C7 | N5 | C12 | 118.3° | 119.2° |
H14 | C7 | H15 | 112.7° | 109.5° |
C8 | N5 | C12 | 123.4° | 121.7° |
N5 | C8 | C9 | 118.6° | 120.8° |
N5 | C8 | H16 | 120.7° | 119.6° |
N5 | C12 | C11 | 118.1° | 120.8° |
N5 | C12 | H19 | 121.0° | 119.6° |
C9 | C8 | H16 | 120.7° | 119.6° |
C8 | C9 | C10 | 120.9° | 119.2° |
C8 | C9 | H17 | 119.6° | 120.4° |
C10 | C9 | H17 | 119.6° | 120.4° |
C9 | C10 | C11 | 118.6° | 118.4° |
C9 | C10 | C13 | 120.3° | 120.8° |
C11 | C10 | C13 | 121.1° | 120.8° |
C10 | C11 | C12 | 120.5° | 119.1° |
C10 | C11 | H18 | 119.8° | 120.4° |
C10 | C13 | C | 109.8° | 109.5° |
C10 | C13 | H20 | 109.4° | 109.5° |
C10 | C13 | H21 | 109.4° | 109.4° |
C12 | C11 | H18 | 119.7° | 120.5° |
C11 | C12 | H19 | 121.0° | 119.6° |
C | C13 | H20 | 109.4° | 109.5° |
C | C13 | H21 | 109.4° | 109.5° |
C13 | C | O | 121.1° | 120.0° |
C13 | C | OXT | 114.4° | 120.0° |
H20 | C13 | H21 | 109.5° | 109.5° |
O | C | OXT | 124.5° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | C2 | C3 | 121.7° | 120.0° |
N | CA | C2 | HA | 119.4° | 120.0° |
N | CA | C3 | HA | 119.3° | 120.0° |
N | CA | C2 | O1 | 178.5° | 180.0° |
N | CA | C2 | C7 | 62.2° | 60.0° |
N | CA | C3 | C4 | 69.6° | 65.0° |
N | CA | C3 | H3 | 50.4° | 55.0° |
N | CA | C3 | H4 | 170.4° | 175.0° |
N | CA | C2 | H24 | 56.8° | 60.1° |
H | N | CA | C2 | 180.0° | 60.0° |
H | N | CA | C3 | 58.0° | 60.0° |
H | N | CA | HA | 60.9° | 180.0° |
H2 | N | CA | C2 | 60.0° | 176.1° |
H2 | N | CA | C3 | 178.0° | 63.9° |
H2 | N | CA | HA | 59.1° | 56.1° |
C2 | CA | C3 | HA | 119.1° | 120.0° |
CA | C2 | O1 | C7 | 120.1° | 120.0° |
CA | C2 | O1 | H24 | 120.9° | 119.9° |
CA | C2 | C7 | H24 | 121.0° | 120.0° |
C2 | CA | C3 | C4 | 168.9° | 175.0° |
C2 | CA | C3 | H3 | 71.2° | 65.0° |
C2 | CA | C3 | H4 | 48.9° | 55.0° |
CA | C2 | C7 | N5 | 85.6° | 175.0° |
CA | C2 | C7 | H14 | 154.4° | 55.0° |
CA | C2 | C7 | H15 | 34.4° | 65.0° |
CA | C2 | O1 | H25 | 180.0° | 60.0° |
C3 | CA | C2 | O1 | 56.7° | 60.0° |
C3 | CA | C2 | C7 | 176.0° | 180.0° |
CA | C3 | C4 | H3 | 120.0° | 120.0° |
CA | C3 | C4 | H4 | 120.0° | 120.0° |
CA | C3 | H3 | H4 | 118.3° | 120.0° |
CA | C3 | C4 | C5 | 171.3° | 180.0° |
CA | C3 | C4 | H5 | 68.7° | 60.0° |
CA | C3 | C4 | H6 | 51.3° | 60.0° |
C3 | CA | C2 | H24 | 64.9° | 59.9° |
HA | CA | C2 | O1 | 62.2° | 60.0° |
HA | CA | C2 | C7 | 57.1° | 60.0° |
HA | CA | C3 | C4 | 49.8° | 55.0° |
HA | CA | C3 | H3 | 169.7° | 175.0° |
HA | CA | C3 | H4 | 70.2° | 65.0° |
HA | CA | C2 | H24 | 176.2° | 179.9° |
O1 | C2 | C7 | H24 | 121.7° | 120.0° |
O1 | C2 | C7 | N5 | 31.8° | 65.0° |
O1 | C2 | C7 | H14 | 88.2° | 175.0° |
O1 | C2 | C7 | H15 | 151.7° | 55.0° |
C2 | C7 | N5 | H14 | 120.0° | 120.0° |
C2 | C7 | N5 | H15 | 120.0° | 120.0° |
C2 | C7 | H14 | H15 | 115.6° | 120.0° |
C2 | C7 | N5 | C8 | 92.7° | 90.1° |
C2 | C7 | N5 | C12 | 84.2° | 90.3° |
C7 | C2 | O1 | H25 | 59.9° | 60.0° |
C4 | C3 | H3 | H4 | 118.3° | 120.0° |
C3 | C4 | C5 | H5 | 120.0° | 120.0° |
C3 | C4 | C5 | H6 | 120.0° | 120.0° |
C3 | C4 | H5 | H6 | 119.3° | 120.0° |
C3 | C4 | C5 | N2 | 160.9° | 180.0° |
C3 | C4 | C5 | H7 | 79.0° | 60.0° |
C3 | C4 | C5 | H8 | 41.0° | 60.0° |
H3 | C3 | C4 | C5 | 51.3° | 60.0° |
H3 | C3 | C4 | H5 | 171.3° | 180.0° |
H3 | C3 | C4 | H6 | 68.7° | 60.0° |
H4 | C3 | C4 | C5 | 68.7° | 60.0° |
H4 | C3 | C4 | H5 | 51.3° | 60.0° |
H4 | C3 | C4 | H6 | 171.3° | 180.0° |
C5 | C4 | H5 | H6 | 119.3° | 120.1° |
C4 | C5 | N2 | H7 | 120.0° | 119.9° |
C4 | C5 | N2 | H8 | 120.0° | 120.0° |
C4 | C5 | H7 | H8 | 119.6° | 120.0° |
C4 | C5 | N2 | C6 | 172.1° | 180.0° |
C4 | C5 | N2 | H9 | 7.9° | 0.0° |
H5 | C4 | C5 | N2 | 41.0° | 60.0° |
H5 | C4 | C5 | H7 | 161.0° | 180.0° |
H5 | C4 | C5 | H8 | 79.0° | 60.0° |
H6 | C4 | C5 | N2 | 79.1° | 60.0° |
H6 | C4 | C5 | H7 | 40.9° | 60.0° |
H6 | C4 | C5 | H8 | 160.9° | 180.0° |
N2 | C5 | H7 | H8 | 119.7° | 120.1° |
C5 | N2 | C6 | H9 | 180.0° | 180.0° |
C5 | N2 | C6 | N3 | 0.3° | 0.0° |
C5 | N2 | C6 | N4 | 178.5° | 180.0° |
H7 | C5 | N2 | C6 | 52.1° | 60.0° |
H7 | C5 | N2 | H9 | 127.9° | 120.0° |
H8 | C5 | N2 | C6 | 68.0° | 60.0° |
H8 | C5 | N2 | H9 | 112.0° | 120.0° |
N2 | C6 | N3 | N4 | 178.7° | 180.0° |
N2 | C6 | N3 | H10 | 178.7° | 0.0° |
N2 | C6 | N3 | H11 | 1.3° | 180.0° |
N2 | C6 | N4 | H12 | 178.7° | 180.0° |
N2 | C6 | N4 | H13 | 1.2° | 0.0° |
H9 | N2 | C6 | N3 | 179.7° | 180.0° |
H9 | N2 | C6 | N4 | 1.5° | 0.0° |
C6 | N3 | H10 | H11 | 180.0° | 179.9° |
N3 | C6 | N4 | H12 | 0.0° | 0.1° |
N3 | C6 | N4 | H13 | 180.0° | 180.0° |
N4 | C6 | N3 | H10 | 0.0° | 179.9° |
N4 | C6 | N3 | H11 | 180.0° | 0.0° |
C6 | N4 | H12 | H13 | 180.0° | 179.9° |
N5 | C7 | H14 | H15 | 115.7° | 120.0° |
C7 | N5 | C8 | C12 | 176.7° | 179.6° |
C7 | N5 | C8 | C9 | 176.6° | 180.0° |
C7 | N5 | C8 | H16 | 3.5° | 0.1° |
C7 | N5 | C12 | C11 | 176.6° | 179.8° |
C7 | N5 | C12 | H19 | 3.4° | 0.1° |
N5 | C7 | C2 | H24 | 153.4° | 55.0° |
H14 | C7 | N5 | C8 | 27.3° | 30.0° |
H14 | C7 | N5 | C12 | 155.8° | 149.7° |
H14 | C7 | C2 | H24 | 33.4° | 65.0° |
H15 | C7 | N5 | C8 | 147.4° | 149.9° |
H15 | C7 | N5 | C12 | 35.8° | 29.7° |
H15 | C7 | C2 | H24 | 86.6° | 175.0° |
N5 | C8 | C9 | H16 | 180.0° | 179.9° |
N5 | C8 | C9 | C10 | 0.2° | 0.1° |
N5 | C8 | C9 | H17 | 179.8° | 179.9° |
C8 | N5 | C12 | C11 | 0.1° | 0.6° |
C8 | N5 | C12 | H19 | 179.9° | 179.7° |
C12 | N5 | C8 | C9 | 0.1° | 0.4° |
C12 | N5 | C8 | H16 | 179.8° | 179.7° |
N5 | C12 | C11 | C10 | 0.3° | 0.5° |
N5 | C12 | C11 | H19 | 180.0° | 179.7° |
N5 | C12 | C11 | H18 | 179.7° | 179.7° |
C8 | C9 | C10 | H17 | 180.0° | 180.0° |
C8 | C9 | C10 | C11 | 0.5° | 0.0° |
C8 | C9 | C10 | C13 | 179.9° | 180.0° |
H16 | C8 | C9 | C10 | 179.8° | 179.9° |
H16 | C8 | C9 | H17 | 0.1° | 0.0° |
C9 | C10 | C11 | C13 | 179.5° | 180.0° |
C9 | C10 | C11 | C12 | 0.6° | 0.2° |
C9 | C10 | C11 | H18 | 179.4° | 180.0° |
C9 | C10 | C13 | C | 25.5° | 90.0° |
C9 | C10 | C13 | H20 | 94.6° | 150.0° |
C9 | C10 | C13 | H21 | 145.5° | 30.0° |
H17 | C9 | C10 | C11 | 179.5° | 180.0° |
H17 | C9 | C10 | C13 | 0.0° | 0.0° |
C10 | C11 | C12 | H18 | 180.0° | 179.8° |
C10 | C11 | C12 | H19 | 179.7° | 179.7° |
C11 | C10 | C13 | C | 155.0° | 90.0° |
C11 | C10 | C13 | H20 | 84.9° | 30.0° |
C11 | C10 | C13 | H21 | 35.0° | 150.0° |
C13 | C10 | C11 | C12 | 179.9° | 179.8° |
C13 | C10 | C11 | H18 | 0.1° | 0.0° |
C10 | C13 | C | H20 | 120.0° | 120.1° |
C10 | C13 | C | H21 | 120.0° | 120.0° |
C10 | C13 | H20 | H21 | 119.9° | 120.0° |
C10 | C13 | C | O | 82.2° | 0.0° |
C10 | C13 | C | OXT | 99.8° | 179.9° |
H18 | C11 | C12 | H19 | 0.3° | 0.1° |
C | C13 | H20 | H21 | 119.9° | 120.0° |
C13 | C | O | OXT | 177.8° | 179.9° |
C13 | C | OXT | HXT | 178.0° | 180.0° |
H20 | C13 | C | O | 157.8° | 120.1° |
H20 | C13 | C | OXT | 20.3° | 60.0° |
H21 | C13 | C | O | 37.8° | 120.0° |
H21 | C13 | C | OXT | 140.2° | 60.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
H24 | C2 | O1 | H25 | 59.1° | 180.0° |