AHT
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.47Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.53Å | 1.53Å | |
CA | CB | sing | 1.53Å | 1.56Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | C1 | sing | 1.53Å | 1.30Å | |
C | HC1 | sing | 1.09Å | 1.10Å | |
C | HC2 | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.51Å | 1.54Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | CD1 | doub | 1.38Å | 1.41Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | doub | 1.38Å | 1.40Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | CZ | doub | 1.39Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | CZ | sing | 1.39Å | 1.39Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CZ | OH | sing | 1.36Å | 1.39Å | |
OH | HH | sing | 0.97Å | 0.95Å | |
C1 | C2 | sing | 1.53Å | 1.47Å | |
C1 | H11 | sing | 1.09Å | 1.10Å | |
C1 | H12 | sing | 1.09Å | 1.10Å | |
C2 | O2 | sing | 1.43Å | 1.23Å | |
C2 | N2 | sing | 1.47Å | 1.30Å | |
C2 | HC22 | sing | 1.09Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
N2 | HN21 | sing | 1.01Å | 1.00Å | |
N2 | HN22 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.1° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | C | 96.8° | 109.5° |
N | CA | CB | 109.1° | 109.5° |
N | CA | HA | 120.6° | 109.5° |
H | N | H2 | 109.4° | 110.9° |
C | CA | CB | 117.6° | 109.5° |
C | CA | HA | 112.6° | 109.4° |
CA | C | C1 | 123.1° | 109.4° |
CA | C | HC1 | 105.1° | 109.5° |
CA | C | HC2 | 105.2° | 109.4° |
CB | CA | HA | 101.1° | 109.4° |
CA | CB | CG | 103.6° | 109.5° |
CA | CB | HB2 | 111.5° | 109.4° |
CA | CB | HB3 | 111.5° | 109.5° |
C1 | C | HC1 | 105.2° | 109.5° |
C1 | C | HC2 | 105.1° | 109.5° |
C | C1 | C2 | 122.1° | 109.4° |
C | C1 | H11 | 105.5° | 109.5° |
C | C1 | H12 | 105.5° | 109.5° |
HC1 | C | HC2 | 113.4° | 109.5° |
CG | CB | HB2 | 111.5° | 109.5° |
CG | CB | HB3 | 111.5° | 109.6° |
CB | CG | CD1 | 115.6° | 120.0° |
CB | CG | CD2 | 125.2° | 119.9° |
HB2 | CB | HB3 | 107.4° | 109.4° |
CD1 | CG | CD2 | 119.1° | 120.1° |
CG | CD1 | CE1 | 121.9° | 120.0° |
CG | CD1 | HD1 | 119.1° | 120.0° |
CG | CD2 | CE2 | 119.5° | 120.1° |
CG | CD2 | HD2 | 120.2° | 119.9° |
CE1 | CD1 | HD1 | 119.1° | 120.0° |
CD1 | CE1 | CZ | 117.6° | 120.0° |
CD1 | CE1 | HE1 | 121.2° | 120.0° |
CE2 | CD2 | HD2 | 120.2° | 120.0° |
CD2 | CE2 | CZ | 120.3° | 120.0° |
CD2 | CE2 | HE2 | 119.8° | 120.1° |
CZ | CE1 | HE1 | 121.2° | 120.0° |
CE1 | CZ | CE2 | 121.5° | 119.8° |
CE1 | CZ | OH | 117.9° | 120.1° |
CZ | CE2 | HE2 | 119.9° | 119.9° |
CE2 | CZ | OH | 120.6° | 120.1° |
CZ | OH | HH | 109.5° | 114.0° |
C2 | C1 | H11 | 105.5° | 109.5° |
C2 | C1 | H12 | 105.4° | 109.4° |
C1 | C2 | O2 | 110.1° | 109.5° |
C1 | C2 | N2 | 129.7° | 109.5° |
C1 | C2 | HC22 | 95.9° | 109.4° |
H11 | C1 | H12 | 113.2° | 109.5° |
O2 | C2 | N2 | 120.2° | 109.5° |
O2 | C2 | HC22 | 153.8° | 109.5° |
C2 | O2 | HO2 | 109.5° | 114.0° |
N2 | C2 | HC22 | 34.1° | 109.5° |
C2 | N2 | HN21 | 109.5° | 111.0° |
C2 | N2 | HN22 | 109.4° | 111.0° |
HN21 | N2 | HN22 | 109.4° | 111.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | C | CB | 115.7° | 120.1° |
N | CA | C | HA | 127.3° | 120.0° |
N | CA | CB | HA | 128.1° | 120.0° |
N | CA | C | C1 | 157.1° | 65.0° |
N | CA | C | HC1 | 37.1° | 175.0° |
N | CA | C | HC2 | 82.9° | 55.0° |
N | CA | CB | CG | 59.6° | 64.9° |
N | CA | CB | HB2 | 60.4° | 55.0° |
N | CA | CB | HB3 | 179.6° | 175.0° |
H | N | CA | C | 180.0° | 63.9° |
H | N | CA | CB | 57.7° | 176.0° |
H | N | CA | HA | 58.5° | 56.1° |
H2 | N | CA | C | 60.0° | 60.0° |
H2 | N | CA | CB | 177.7° | 60.1° |
H2 | N | CA | HA | 61.4° | 180.0° |
C | CA | CB | HA | 123.1° | 119.9° |
CA | C | C1 | HC1 | 120.0° | 120.0° |
CA | C | C1 | HC2 | 120.0° | 119.9° |
CA | C | HC1 | HC2 | 114.3° | 120.0° |
C | CA | CB | CG | 168.5° | 175.0° |
C | CA | CB | HB2 | 48.5° | 65.0° |
C | CA | CB | HB3 | 71.5° | 54.9° |
CA | C | C1 | C2 | 178.5° | NaN° |
CA | C | C1 | H11 | 58.5° | 60.0° |
CA | C | C1 | H12 | 61.5° | 60.1° |
CB | CA | C | C1 | 41.3° | 175.0° |
CB | CA | C | HC1 | 78.7° | 55.0° |
CB | CA | C | HC2 | 161.3° | 65.1° |
CA | CB | CG | HB2 | 120.0° | 119.9° |
CA | CB | CG | HB3 | 120.0° | 120.1° |
CA | CB | HB2 | HB3 | 122.4° | 119.9° |
CA | CB | CG | CD1 | 68.3° | 90.0° |
CA | CB | CG | CD2 | 108.5° | 90.4° |
HA | CA | C | C1 | 75.7° | 55.0° |
HA | CA | C | HC1 | 164.3° | 65.0° |
HA | CA | C | HC2 | 44.3° | 175.0° |
HA | CA | CB | CG | 68.5° | 55.1° |
HA | CA | CB | HB2 | 171.5° | 175.0° |
HA | CA | CB | HB3 | 51.5° | 65.1° |
C1 | C | HC1 | HC2 | 114.3° | 120.1° |
C | C1 | C2 | H11 | 120.0° | 120.1° |
C | C1 | C2 | H12 | 120.0° | 120.0° |
C | C1 | H11 | H12 | 114.8° | 120.1° |
C | C1 | C2 | O2 | 178.8° | 65.0° |
C | C1 | C2 | N2 | 0.4° | 175.0° |
C | C1 | C2 | HC22 | 5.1° | 55.0° |
HC1 | C | C1 | C2 | 61.5° | 60.0° |
HC1 | C | C1 | H11 | 178.5° | 180.0° |
HC1 | C | C1 | H12 | 58.5° | 59.9° |
HC2 | C | C1 | C2 | 58.5° | 60.1° |
HC2 | C | C1 | H11 | 61.5° | 60.0° |
HC2 | C | C1 | H12 | 178.4° | 180.0° |
CG | CB | HB2 | HB3 | 122.4° | 120.1° |
CB | CG | CD1 | CD2 | 177.0° | 179.7° |
CB | CG | CD1 | CE1 | 177.8° | 180.0° |
CB | CG | CD1 | HD1 | 2.2° | 0.0° |
CB | CG | CD2 | CE2 | 176.3° | 179.9° |
CB | CG | CD2 | HD2 | 3.7° | 0.0° |
HB2 | CB | CG | CD1 | 171.7° | 30.0° |
HB2 | CB | CG | CD2 | 11.5° | 149.7° |
HB3 | CB | CG | CD1 | 51.7° | 150.0° |
HB3 | CB | CG | CD2 | 131.6° | 29.7° |
CG | CD1 | CE1 | HD1 | 180.0° | 179.9° |
CD1 | CG | CD2 | CE2 | 0.3° | 0.2° |
CD1 | CG | CD2 | HD2 | 179.7° | 179.7° |
CG | CD1 | CE1 | CZ | 1.3° | 0.0° |
CG | CD1 | CE1 | HE1 | 178.7° | 180.0° |
CD2 | CG | CD1 | CE1 | 0.9° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.2° | 179.7° |
CG | CD2 | CE2 | HD2 | 180.0° | 180.0° |
CG | CD2 | CE2 | CZ | 1.0° | 0.1° |
CG | CD2 | CE2 | HE2 | 179.0° | 180.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 179.9° |
CD1 | CE1 | CZ | CE2 | 0.5° | 0.3° |
CD1 | CE1 | CZ | OH | 179.4° | 180.0° |
HD1 | CD1 | CE1 | CZ | 178.7° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 1.3° | 0.1° |
CD2 | CE2 | CZ | CE1 | 0.6° | 0.4° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.9° |
CD2 | CE2 | CZ | OH | 179.5° | 180.0° |
HD2 | CD2 | CE2 | CZ | 179.0° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 1.0° | 0.0° |
CE1 | CZ | CE2 | OH | 179.9° | 179.7° |
CE1 | CZ | CE2 | HE2 | 179.4° | 179.7° |
CE1 | CZ | OH | HH | 180.0° | 90.0° |
HE1 | CE1 | CZ | CE2 | 179.4° | 179.7° |
HE1 | CE1 | CZ | OH | 0.6° | 0.0° |
CE2 | CZ | OH | HH | 0.1° | 89.7° |
HE2 | CE2 | CZ | OH | 0.5° | 0.0° |
C2 | C1 | H11 | H12 | 114.8° | 119.9° |
C1 | C2 | O2 | N2 | 179.2° | 120.0° |
C1 | C2 | O2 | HC22 | 171.1° | 120.0° |
C1 | C2 | N2 | HC22 | 8.5° | 119.9° |
C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
C1 | C2 | N2 | HN21 | 180.0° | 56.1° |
C1 | C2 | N2 | HN22 | 60.0° | 180.0° |
H11 | C1 | C2 | O2 | 58.8° | 175.0° |
H11 | C1 | C2 | N2 | 120.3° | 54.9° |
H11 | C1 | C2 | HC22 | 125.1° | 65.0° |
H12 | C1 | C2 | O2 | 61.2° | 55.0° |
H12 | C1 | C2 | N2 | 119.6° | 65.0° |
H12 | C1 | C2 | HC22 | 114.8° | 175.0° |
O2 | C2 | N2 | HC22 | 172.4° | 120.0° |
O2 | C2 | N2 | HN21 | 1.0° | 64.0° |
O2 | C2 | N2 | HN22 | 120.9° | 60.0° |
N2 | C2 | O2 | HO2 | 0.8° | 60.0° |
C2 | N2 | HN21 | HN22 | 120.0° | 123.9° |
HC22 | C2 | O2 | HO2 | 8.8° | 180.0° |
HC22 | C2 | N2 | HN21 | 171.5° | 176.0° |
HC22 | C2 | N2 | HN22 | 51.5° | 60.1° |