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SummaryGeometryRelated PDB entries

A1JVT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O02C01sing1.43Å1.42Å
C03O02sing1.36Å1.38Å
C04C03doub1.37Å1.38ÅAromatic
C05C04sing1.40Å1.43ÅAromatic
C06C05doub1.41Å1.41ÅAromatic
C08C07doub1.36Å1.38ÅAromatic
O09C08sing1.36Å1.36Å
C10O09sing1.43Å1.42Å
C07C06sing1.41Å1.43ÅAromatic
N11C06sing1.34Å1.39ÅAromatic
C12N11doub1.31Å1.33ÅAromatic
C13C12sing1.39Å1.43ÅAromatic
C14C13doub1.39Å1.38ÅAromatic
N15C14sing1.39Å1.43Å
C17C16sing1.53Å1.56Å
C16N15sing1.47Å1.47Å
C18N15sing1.47Å1.50Å
C19C18sing1.53Å1.53Å
N20C19sing1.47Å1.48Å
C21N20sing1.38Å1.40Å
N22C21doub1.33Å1.39ÅAromatic
C23N22sing1.32Å1.35ÅAromatic
C24C23doub1.39Å1.41ÅAromatic
C26C25sing1.51Å1.51Å
C27C26doub1.38Å1.40ÅAromatic
C28C27sing1.38Å1.40ÅAromatic
C29C28doub1.38Å1.39ÅAromatic
C30C29sing1.38Å1.39ÅAromatic
C31C30doub1.38Å1.40ÅAromatic
C25C24sing1.51Å1.50Å
C32C24sing1.39Å1.41ÅAromatic
N33C32doub1.32Å1.35ÅAromatic
C03C08sing1.40Å1.42ÅAromatic
C05C14sing1.41Å1.44ÅAromatic
C17N20sing1.47Å1.49Å
C21N33sing1.32Å1.37ÅAromatic
C26C31sing1.38Å1.40ÅAromatic
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C10H103sing1.09Å1.10Å
C13H131sing1.08Å1.08Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C28H281sing1.08Å1.08Å
C01H011sing1.09Å1.10Å
C01H012sing1.09Å1.10Å
C01H013sing1.09Å1.10Å
C04H041sing1.08Å1.08Å
C07H071sing1.08Å1.08Å
C12H121sing1.08Å1.08Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
C19H191sing1.09Å1.10Å
C19H192sing1.09Å1.10Å
C23H231sing1.08Å1.08Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
C27H271sing1.08Å1.08Å
C29H291sing1.08Å1.08Å
C30H301sing1.08Å1.08Å
C31H311sing1.08Å1.08Å
C32H321sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C01O02C03119.8°117.0°
O02C01H011109.5°109.5°
O02C01H012109.5°109.4°
O02C01H013109.5°109.4°
O02C03C04119.2°119.7°
O02C03C08121.3°119.7°
C03C04C05123.0°119.7°
C04C03C08119.4°120.6°
C03C04H041118.5°120.1°
C04C05C06116.3°119.9°
C04C05C14125.5°121.2°
C05C04H041118.5°120.2°
C05C06C07120.6°119.2°
C05C06N11122.2°120.0°
C06C05C14118.1°118.9°
C07C08O09124.3°119.6°
C08C07C06121.2°119.8°
C07C08C03119.4°120.9°
C08C07H071119.4°120.1°
C08O09C10116.9°117.0°
O09C08C03116.4°119.6°
O09C10H101109.5°109.5°
O09C10H102109.5°109.4°
O09C10H103109.5°109.5°
C07C06N11117.1°120.9°
C06C07H071119.4°120.1°
C06N11C12118.0°121.7°
N11C12C13123.9°121.8°
N11C12H121118.1°119.1°
C12C13C14118.5°119.7°
C12C13H131120.7°120.2°
C13C12H121118.1°119.1°
C13C14N15122.9°121.0°
C13C14C05119.2°117.9°
C14C13H131120.8°120.1°
C14N15C16119.5°111.0°
C14N15C18113.7°111.0°
N15C14C05117.9°121.0°
C17C16N15114.3°109.3°
C16C17N20113.8°109.4°
C16C17H171108.4°109.5°
C16C17H172108.4°109.4°
C17C16H161108.2°109.5°
C17C16H162108.3°109.5°
C16N15C18109.1°110.9°
N15C16H161108.3°109.5°
N15C16H162108.3°109.5°
N15C18C19111.3°109.4°
N15C18H181109.0°109.5°
N15C18H182109.0°109.5°
C18C19N20109.5°109.3°
C19C18H181109.0°109.5°
C19C18H182109.0°109.5°
C18C19H191109.4°109.5°
C18C19H192109.4°109.5°
C19N20C21123.8°111.0°
C19N20C17112.4°110.9°
N20C19H191109.5°109.5°
N20C19H192109.5°109.5°
N20C21N22119.3°119.2°
C21N20C17122.6°111.0°
N20C21N33117.5°119.2°
C21N22C23116.2°120.7°
N22C21N33123.2°121.5°
N22C23C24125.6°119.2°
N22C23H231117.2°120.4°
C23C24C25124.0°120.7°
C23C24C32112.9°118.6°
C24C23H231117.2°120.4°
C25C26C27121.5°120.0°
C26C25C24112.1°109.4°
C25C26C31121.1°120.0°
C26C25H251108.8°109.4°
C26C25H252108.8°109.5°
C26C27C28121.2°120.0°
C27C26C31117.4°120.0°
C26C27H271119.4°120.0°
C27C28C29120.7°120.0°
C27C28H281119.7°120.0°
C28C27H271119.4°120.0°
C28C29C30119.0°120.0°
C29C28H281119.7°119.9°
C28C29H291120.5°120.0°
C29C30C31120.1°120.0°
C30C29H291120.5°120.0°
C29C30H301120.0°120.0°
C30C31C26121.6°120.0°
C31C30H301119.9°120.0°
C30C31H311119.2°120.0°
C25C24C32123.1°120.7°
C24C25H251108.8°109.5°
C24C25H252108.8°109.5°
C24C32N33125.2°119.2°
C24C32H321117.4°120.4°
C32N33C21116.9°120.8°
N33C32H321117.4°120.4°
N20C17H171108.4°109.5°
N20C17H172108.4°109.5°
C26C31H311119.2°120.0°
H101C10H102109.5°109.5°
H101C10H103109.5°109.5°
H102C10H103109.5°109.5°
H171C17H172109.5°109.5°
H011C01H012109.5°109.5°
H011C01H013109.5°109.5°
H012C01H013109.4°109.5°
H161C16H162109.5°109.5°
H181C18H182109.5°109.4°
H191C19H192109.5°109.6°
H251C25H252109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C01O02C03C0420.2°0.1°
C01O02C03C08160.4°180.0°
O02C01H011H012120.0°120.0°
O02C01H011H013120.0°119.9°
O02C01H012H013120.0°119.9°
O02C03C04C08179.4°179.9°
O02C03C04C05179.2°180.0°
O02C03C08C07179.6°180.0°
O02C03C08O090.6°0.0°
C03O02C01H011180.0°60.0°
C03O02C01H01260.0°180.0°
C03O02C01H01360.0°60.0°
O02C03C04H0410.8°0.1°
C03C04C05H041180.0°179.9°
C03C04C05C061.3°0.0°
C04C03C08C070.9°0.1°
C04C03C08O09180.0°179.9°
C03C04C05C14179.9°179.5°
C04C05C06C14178.7°179.6°
C04C05C06C071.4°0.0°
C04C05C06N11178.5°179.7°
C04C05C14C13179.6°180.0°
C04C05C14N154.1°0.0°
C05C04C03C080.2°0.1°
C05C06C07C080.3°0.0°
C05C06C07N11179.9°179.7°
C05C06N11C120.0°0.5°
C06C05C14C131.1°0.4°
C06C05C14N15177.4°179.5°
C06C05C04H041178.7°179.9°
C05C06C07H071179.7°180.0°
C07C08O09C03179.0°180.0°
C07C08O09C1025.1°0.0°
C08C07C06H071180.0°180.0°
C08C07C06N11179.6°179.7°
O09C08C07C06179.9°180.0°
C08O09C10H101180.0°180.0°
C08O09C10H10260.0°60.0°
C08O09C10H10360.0°60.0°
O09C08C07H0710.1°0.0°
C10O09C08C03155.9°180.0°
O09C10H101H102120.0°120.0°
O09C10H101H103120.0°120.0°
O09C10H102H103120.0°120.0°
C07C06N11C12179.9°179.8°
C06C07C08C030.9°0.0°
C07C06C05C14180.0°179.6°
C06N11C12C131.4°0.0°
N11C06C05C140.2°0.7°
N11C06C07H0710.4°0.3°
C06N11C12H121178.6°179.9°
N11C12C13H121180.0°180.0°
N11C12C13C142.6°0.3°
N11C12C13H131177.4°179.9°
C12C13C14H131180.0°179.7°
C12C13C14N15178.5°180.0°
C12C13C14C052.3°0.0°
C13C14N15C05176.1°180.0°
C13C14N15C1620.8°60.0°
C13C14N15C18110.5°63.8°
C14C13C12H121177.4°179.8°
C14N15C16C17176.1°176.8°
C14N15C16C18133.3°123.9°
C14N15C18C19163.4°176.8°
N15C14C13H1311.6°0.3°
C14N15C16H16163.2°63.2°
C14N15C16H16255.4°56.8°
C14N15C18H18176.3°56.8°
C14N15C18H18243.2°63.2°
C17C16N15H161120.7°119.9°
C17C16N15H162120.7°120.0°
C17C16N15C1850.6°59.3°
C16C17N20C1945.9°59.3°
C16C17N20C21145.8°176.8°
C16C17N20H171120.7°120.0°
C16C17N20H172120.6°119.9°
C16C17H171H172118.0°120.0°
C17C16H161H162117.8°120.1°
C16N15C18C1960.3°59.3°
C16N15C14C05163.0°120.0°
N15C16C17N2044.6°58.4°
N15C16C17H17176.1°61.6°
N15C16C17H172165.2°178.4°
N15C16H161H162117.8°120.0°
C16N15C18H18160.0°179.3°
C16N15C18H182179.4°60.7°
N15C18C19H181120.3°120.0°
N15C18C19H182120.3°120.0°
N15C18C19N2062.9°58.4°
C18N15C14C0565.6°116.2°
C18N15C16H16170.1°60.6°
C18N15C16H162171.3°179.3°
N15C18H181H182119.2°120.0°
N15C18C19H191177.1°178.3°
N15C18C19H19257.1°61.5°
C18C19N20H191120.0°119.9°
C18C19N20H192120.0°119.9°
C18C19N20C21137.3°176.8°
C18C19N20C1754.6°59.3°
C19C18H181H182119.1°120.1°
C18C19H191H192119.9°120.1°
C19N20C21C17166.9°123.8°
C19N20C21N223.4°124.0°
C19N20C21N33177.7°56.2°
C19N20C17H17174.7°60.7°
C19N20C17H172166.6°179.3°
N20C19C18H18157.3°178.4°
N20C19C18H182176.8°61.6°
N20C19H191H192120.0°120.1°
N20C21N22N33178.8°179.8°
N20C21N22C23179.5°180.0°
N20C21N33C32179.7°180.0°
C21N20C17H17193.6°63.2°
C21N20C17H17225.1°56.8°
C21N20C19H19117.3°56.9°
C21N20C19H192102.7°63.2°
C21N22C23C240.3°0.0°
N22C21N33C320.9°0.2°
N22C21N20C17170.3°0.2°
C21N22C23H231179.7°179.8°
N22C23C24H231180.0°179.7°
N22C23C24C25179.2°180.0°
N22C23C24C320.9°0.2°
C23N22C21N330.7°0.2°
C23C24C25C26111.3°90.0°
C23C24C25C32178.1°179.8°
C23C24C32N330.7°0.2°
C23C24C25H251128.3°150.0°
C23C24C25H2529.1°29.9°
C23C24C32H321179.3°180.0°
C25C26C27C31178.6°179.8°
C25C26C27C28179.5°180.0°
C25C26C31C30179.7°180.0°
C26C25C24H251120.4°120.0°
C26C25C24H252120.4°120.0°
C26C25C24C3266.8°89.8°
C26C25H251H252118.8°120.0°
C25C26C27H2710.5°0.1°
C25C26C31H3110.3°0.1°
C26C27C28H271180.0°179.9°
C26C27C28C291.2°0.1°
C27C26C31C301.6°0.2°
C27C26C25C24127.3°89.8°
C26C27C28H281178.8°180.0°
C27C26C25H2516.9°150.2°
C27C26C25H252112.3°30.2°
C27C26C31H311178.4°179.7°
C27C28C29H281180.0°179.9°
C27C28C29C300.3°0.3°
C28C27C26C311.9°0.2°
C27C28C29H291179.7°180.0°
C28C29C30H291180.0°179.7°
C28C29C30C310.1°0.3°
C29C28C27H271178.8°180.0°
C28C29C30H301179.9°180.0°
C29C30C31H301180.0°179.7°
C29C30C31C260.8°0.1°
C30C29C28H281179.7°179.8°
C29C30C31H311179.2°179.9°
C30C31C26H311180.0°179.9°
C31C30C29H291180.0°179.9°
C25C24C32N33179.0°180.0°
C24C25C26C3151.3°90.0°
C25C24C23H2310.8°0.2°
C24C25H251H252118.8°120.1°
C25C24C32H3211.0°0.2°
C24C32N33H321180.0°179.8°
C24C32N33C210.2°0.0°
C32C24C23H231179.1°180.0°
C32C24C25H25153.6°30.2°
C32C24C25H252172.8°150.3°
C08C03C04H041179.8°180.0°
C03C08C07H071179.1°180.0°
C05C14C13H131177.7°179.7°
C14C05C04H0410.1°0.4°
C17N20C21N3310.8°180.0°
N20C17H171H172118.0°120.1°
N20C17C16H16176.1°61.5°
N20C17C16H162165.3°178.3°
C17N20C19H191174.6°179.2°
C17N20C19H19265.4°60.6°
C21N33C32H321179.8°179.8°
C31C26C25H251171.7°30.0°
C31C26C25H25269.1°150.0°
C31C26C27H271178.1°179.7°
C26C31C30H301179.2°179.8°
H101C10H102H103120.0°120.0°
H131C13C12H1212.6°0.1°
H171C17C16H161163.2°178.4°
H171C17C16H16244.6°58.3°
H172C17C16H16144.5°58.4°
H172C17C16H16274.1°61.7°
H281C28C27H2711.2°0.1°
H281C28C29H2910.3°0.0°
H011C01H012H013120.0°120.1°
H181C18C19H19162.7°61.7°
H181C18C19H192177.4°58.5°
H182C18C19H19156.8°58.4°
H182C18C19H19263.2°178.5°
H291C29C30H3010.0°0.2°
H301C30C31H3110.8°0.4°

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PDB entries from 2026-07-22

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