Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9UR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O23C22sing1.43Å1.42Å
C22C24sing1.55Å1.50Å
C22C21sing1.55Å1.47Å
C24C25sing1.53Å1.48Å
C24O31sing1.43Å1.47Å
C25O26sing1.43Å1.40Å
O44P18doub1.48Å1.46Å
C16C4'sing1.53Å1.51Å
C16O17sing1.43Å1.39Å
O20C21sing1.42Å1.40Å
O20P18sing1.61Å1.63Å
O31C32sing1.43Å1.43Å
C4'C3'sing1.54Å1.52Å
C4'O4'sing1.43Å1.44Å
C21C32sing1.54Å1.51Å
O2'C2'sing1.43Å1.42Å
C3'O28sing1.43Å1.41Å
C3'C2'sing1.54Å1.44Å
P18O17sing1.61Å1.65Å
P18O19sing1.61Å1.45Å
C32N33sing1.46Å1.43Å
O30P27doub1.48Å1.47Å
O26P27sing1.61Å1.64Å
O28P27sing1.61Å1.67Å
C2'C1'sing1.54Å1.49Å
O4'C1'sing1.43Å1.44Å
P27O29sing1.61Å1.50Å
N33C36sing1.36Å1.32ÅAromatic
N33C34sing1.36Å1.36ÅAromatic
C1'N9sing1.47Å1.43Å
N42C36sing1.37Å1.49Å
N42C40sing1.36Å1.45Å
C36C37doub1.39Å1.35ÅAromatic
N41C40sing1.37Å1.44Å
C34N35doub1.30Å1.36ÅAromatic
N9C8sing1.36Å1.35ÅAromatic
N9C4sing1.37Å1.33ÅAromatic
C40N39doub1.32Å1.44Å
C8N7doub1.30Å1.36ÅAromatic
C37N35sing1.35Å1.34ÅAromatic
C37C38sing1.47Å1.54Å
C4N3doub1.33Å1.50ÅAromatic
C4C5sing1.41Å1.36ÅAromatic
N39C38sing1.34Å1.42Å
N7C5sing1.35Å1.34ÅAromatic
N3C2sing1.32Å1.46ÅAromatic
C38O43doub1.22Å1.18Å
C5C6doub1.40Å1.55ÅAromatic
C2N1doub1.32Å1.44ÅAromatic
C6N1sing1.33Å1.41ÅAromatic
C6N01sing1.38Å1.45Å
C2H1sing1.08Å1.08Å
N01H2sing0.97Å1.00Å
N01H3sing0.97Å1.00Å
C8H4sing1.08Å1.08Å
C1'H5sing1.09Å1.10Å
C2'H6sing1.09Å1.10Å
O2'H7sing0.97Å0.95Å
C3'H8sing1.09Å1.10Å
C4'H9sing1.09Å1.10Å
C16H10sing1.09Å1.10Å
C16H11sing1.09Å1.10Å
O19H12sing0.97Å0.95Å
C21H13sing1.09Å1.10Å
C22H14sing1.09Å1.10Å
O23H15sing0.97Å0.95Å
C24H16sing1.08Å1.10Å
C25H17sing1.09Å1.10Å
C25H18sing1.09Å1.10Å
O29H19sing0.97Å0.95Å
C32H20sing1.09Å1.10Å
C34H21sing1.08Å1.08Å
N41H22sing0.97Å1.00Å
N41H23sing0.97Å1.00Å
N42H24sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O23C22C24110.9°110.6°
O23C22C21110.1°110.6°
O23C22H14111.8°110.5°
C22O23H15109.5°114.0°
C24C22C21102.1°103.8°
C22C24C25111.9°108.8°
C22C24O31107.1°106.9°
C24C22H14110.6°110.6°
C22C24H16109.9°110.3°
C22C21O20108.0°110.4°
C22C21C32104.9°104.1°
C22C21H13110.7°109.5°
C21C22H14110.9°110.6°
C25C24O31107.5°109.5°
C24C25O26109.1°109.2°
C25C24H16110.1°110.7°
C24C25H17109.6°109.5°
C24C25H18109.6°109.5°
C24O31C32107.9°111.7°
O31C24H16110.2°110.7°
C25O26P27113.9°123.4°
O26C25H17109.5°109.5°
O26C25H18109.6°109.5°
O44P18O20107.4°109.6°
O44P18O17111.0°109.5°
O44P18O19107.4°109.5°
C4'C16O17111.5°109.5°
C16C4'C3'118.2°110.4°
C16C4'O4'109.7°109.9°
C16C4'H9107.6°110.0°
C4'C16H10109.0°109.4°
C4'C16H11109.0°109.4°
C16O17P18117.2°123.2°
O17C16H10108.9°109.4°
O17C16H11108.9°109.5°
C21O20P18121.2°122.4°
O20C21C32111.0°111.5°
O20C21H13111.8°110.8°
O20P18O17118.1°109.2°
O20P18O19107.4°109.5°
O31C32C21105.2°108.0°
O31C32N33110.9°109.8°
O31C32H20110.7°109.8°
C3'C4'O4'105.4°107.5°
C4'C3'O28120.8°110.4°
C4'C3'C2'103.0°104.9°
C4'C3'H8108.9°110.4°
C3'C4'H9107.3°109.7°
C4'O4'C1'107.7°109.4°
O4'C4'H9108.4°109.4°
C21C32N33109.6°109.8°
C32C21H13110.2°110.3°
C21C32H20109.6°109.8°
O2'C2'C3'105.0°110.4°
O2'C2'C1'104.6°110.4°
O2'C2'H6114.8°110.3°
C2'O2'H7109.5°114.1°
O28C3'C2'102.6°110.1°
C3'O28P27116.4°123.2°
O28C3'H8110.6°110.5°
C3'C2'C1'103.1°105.0°
C3'C2'H6114.5°110.4°
C2'C3'H8110.2°110.4°
O17P18O19105.0°109.5°
P18O19H12109.5°114.0°
C32N33C36123.6°126.2°
C32N33C34129.5°126.3°
N33C32H20110.7°109.7°
O30P27O26113.0°109.4°
O30P27O28113.7°109.4°
O30P27O29103.8°109.4°
O26P27O28109.5°109.7°
O26P27O29107.1°109.4°
O28P27O29109.4°109.5°
C2'C1'O4'106.0°108.1°
C2'C1'N9117.2°109.7°
C2'C1'H5108.5°109.7°
C1'C2'H6113.6°110.4°
O4'C1'N9106.6°109.7°
O4'C1'H5109.1°109.8°
P27O29H19109.5°114.0°
C36N33C34106.9°107.5°
N33C36N42129.6°134.7°
N33C36C37109.0°106.4°
N33C34N35109.4°109.5°
N33C34H21125.3°125.2°
C1'N9C8127.2°126.3°
C1'N9C4125.7°126.3°
N9C1'H5109.2°109.7°
C36N42C40119.0°120.5°
N42C36C37121.5°118.9°
C36N42H24120.5°119.7°
N42C40N41117.0°118.7°
N42C40N39121.7°122.5°
C40N42H24120.5°119.7°
C36C37N35108.9°107.4°
C36C37C38118.6°118.1°
N41C40N39121.3°118.8°
C40N41H22120.0°120.0°
C40N41H23120.0°120.0°
C34N35C37105.8°109.1°
N35C34H21125.3°125.2°
C8N9C4107.1°107.4°
N9C8N7109.6°110.0°
N9C8H4125.2°125.0°
N9C4N3130.9°134.9°
N9C4C5108.6°106.0°
C40N39C38118.0°121.4°
C8N7C5106.1°109.5°
N7C8H4125.2°125.0°
N35C37C38132.5°134.5°
C37C38N39121.2°118.6°
C37C38O43118.9°120.7°
N3C4C5120.5°119.1°
C4N3C2118.9°120.6°
C4C5N7108.7°107.1°
C4C5C6119.8°118.2°
N39C38O43119.9°120.7°
N7C5C6131.5°134.7°
N3C2N1121.3°122.5°
N3C2H1119.4°118.7°
C5C6N1120.3°118.5°
C5C6N01122.5°120.8°
C2N1C6119.2°121.2°
N1C2H1119.3°118.8°
N1C6N01117.2°120.7°
C6N01H2109.5°120.0°
C6N01H3109.5°120.1°
H2N01H3109.4°119.9°
H10C16H11109.5°109.5°
H17C25H18109.4°109.6°
H22N41H23120.0°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O23C22C24C21117.3°118.6°
O23C22C24H14124.6°122.8°
O23C22C21H14124.3°122.8°
O23C22C24C25151.5°145.8°
O23C22C24O3190.9°96.0°
O23C22C21O2036.0°23.5°
O23C22C21C3282.4°96.3°
O23C22C21H13158.8°145.7°
O23C22C24H1628.9°24.3°
C24C22C21H14117.9°118.6°
C22C24C25O31117.3°116.5°
C22C24C25H16122.5°121.3°
C22C24O31H16119.5°120.1°
C22C24C25O2677.2°29.9°
C24C22C21O20153.9°142.1°
C22C24O31C326.9°14.1°
C24C22C21C3235.5°22.3°
C24C22C21H1383.4°95.6°
C24C22O23H15180.0°61.4°
C22C24C25H17162.8°149.8°
C22C24C25H1842.7°90.0°
C21C22C24C2591.2°95.5°
C21C22C24O3126.4°22.6°
C22C21O20C32114.5°115.3°
C22C21O20H13122.1°121.5°
C22C21O20P18105.2°91.7°
C22C21C32O3132.3°14.9°
C22C21C32H13119.2°117.4°
C22C21C32N33151.5°134.5°
C21C22O23H1567.8°175.8°
C21C22C24H16146.2°143.0°
C22C21C32H2086.7°104.8°
C25C24O31H16120.1°122.2°
C24C25O26H17120.0°119.9°
C24C25O26H18120.0°119.9°
C25C24O31C32113.5°103.6°
C24C25O26P27130.9°123.6°
C25C24C22H1426.9°23.1°
C24C25H17H18120.2°120.1°
O31C24C25O2640.1°86.6°
C24O31C32C2115.3°0.7°
C24O31C32N33133.6°120.3°
O31C24C22H14144.5°141.2°
O31C24C25H1779.8°33.3°
O31C24C25H18160.1°153.5°
C24O31C32H20103.1°119.0°
C25O26P27O3040.9°46.8°
C25O26P27O2887.0°166.8°
C25O26P27O29154.5°73.1°
O26C25C24H16160.3°151.1°
O26C25H17H18120.1°120.1°
O44P18O17C1631.5°161.1°
O44P18O20C21140.9°141.4°
O44P18O20O17126.5°119.9°
O44P18O20O19115.2°120.1°
O44P18O17O19115.7°120.1°
O44P18O19H120.0°60.1°
C4'C16O17H10120.3°120.0°
C4'C16O17H11120.3°120.0°
C16C4'C3'O4'122.9°119.9°
C16C4'C3'H9121.7°121.3°
C16C4'O4'H9117.1°120.8°
C16C4'C3'O2838.6°18.4°
C16C4'C3'C2'152.1°137.0°
C4'C16O17P18159.1°158.2°
C16C4'O4'C1'136.3°144.0°
C16C4'C3'H891.0°104.1°
C4'C16H10H11119.1°120.0°
C16O17P18O2093.2°78.9°
O17C16C4'C3'53.1°115.7°
O17C16C4'O4'67.6°126.0°
C16O17P18O19147.2°41.1°
O17C16C4'H9174.7°5.5°
O17C16H10H11119.0°120.0°
O20C21C32O31148.7°134.0°
O20C21C32H13124.4°123.6°
C21O20P18O1714.5°21.5°
C21O20P18O19103.8°98.5°
O20C21C32N3392.1°106.4°
O20C21C22H1488.3°99.3°
O20C21C32H2029.7°14.3°
P18O20C21C32140.3°153.0°
O20P18O17O19119.6°119.9°
O20P18O19H12115.2°179.7°
P18O20C21H1316.8°29.7°
O31C32C21N33119.2°119.6°
O31C32C21H20119.1°119.7°
O31C32N33H20123.3°120.7°
O31C32N33C36128.1°156.5°
O31C32N33C3452.5°23.9°
O31C32C21H1386.9°102.5°
C32O31C24H16126.4°134.2°
C3'C4'O4'H9114.6°119.0°
C4'C3'C2'O2'71.4°114.2°
C4'C3'O28C2'113.7°115.3°
C4'C3'O28H8128.9°122.4°
C4'C3'C2'H8116.1°118.9°
C4'C3'O28P27173.7°122.7°
C4'C3'C2'C1'37.9°4.7°
C3'C4'O4'C1'8.0°23.9°
C4'C3'C2'H6161.8°123.7°
C3'C4'C16H10173.4°4.3°
C3'C4'C16H1167.2°124.3°
O4'C4'C3'O2884.3°101.5°
O4'C4'C3'C2'29.2°17.1°
C4'O4'C1'C2'15.5°20.8°
C4'O4'C1'N9110.0°140.5°
C4'O4'C1'H5132.2°98.9°
O4'C4'C3'H8146.1°136.0°
O4'C4'C16H1052.7°114.1°
O4'C4'C16H11172.1°5.9°
C21C32N33H20121.1°120.8°
C21C32N33C36116.2°85.0°
C21C32N33C3463.1°94.7°
C32C21C22H14153.3°140.9°
O2'C2'C3'O28162.4°127.1°
O2'C2'C3'C1'109.3°118.9°
O2'C2'C3'H6126.8°122.1°
O2'C2'C1'H6125.9°122.1°
O2'C2'C1'O4'75.5°128.1°
O2'C2'C1'N9165.8°112.3°
O2'C2'C1'H541.6°8.4°
O2'C2'C3'H844.7°4.7°
O28C3'C2'H8117.7°122.3°
C3'O28P27O302.4°12.9°
C3'O28P27O26125.1°132.9°
O28C3'C2'C1'88.3°114.0°
C3'O28P27O29117.9°107.0°
O28C3'C2'H635.7°4.9°
O28C3'C4'H9160.4°139.7°
C2'C3'O28P2772.6°122.0°
C3'C2'C1'H6124.5°118.9°
C3'C2'C1'O4'34.1°9.2°
C3'C2'C1'N984.6°128.8°
C3'C2'C1'H5151.2°110.6°
C3'C2'O2'H7180.0°177.0°
C2'C3'C4'H986.2°101.7°
P18O17C16H1080.5°81.8°
P18O17C16H1138.8°38.2°
O17P18O19H12118.3°59.9°
C32N33C36C34179.5°179.7°
C32N33C36N420.5°0.0°
C32N33C36C37179.7°179.9°
C32N33C34N35179.7°180.0°
N33C32C21H1332.4°17.2°
C32N33C34H210.3°0.0°
O30P27O26O28127.9°120.0°
O30P27O26O29113.6°119.9°
O30P27O28O29115.5°119.9°
O30P27O29H190.0°59.9°
O26P27O28O29117.1°120.1°
P27O26C25H17109.1°116.5°
P27O26C25H1810.9°3.7°
O26P27O29H19119.7°60.0°
P27O28C3'H844.8°0.3°
O28P27O29H19121.7°179.8°
C2'C1'O4'N9125.5°119.7°
C2'C1'O4'H5116.6°119.7°
C2'C1'N9H5123.8°120.7°
C2'C1'N9C894.8°95.0°
C2'C1'N9C488.9°84.9°
C1'C2'O2'H771.8°61.5°
C1'C2'C3'H8154.0°123.6°
O4'C1'N9H5117.8°120.7°
O4'C1'N9C823.7°23.6°
O4'C1'N9C4152.6°156.4°
O4'C1'C2'H6158.6°109.8°
C1'O4'C4'H9106.6°95.1°
N33C36N42C37179.8°179.9°
N33C36N42C40179.9°180.0°
C36N33C34N350.3°0.3°
N33C36C37N350.2°0.4°
N33C36C37C38179.8°179.9°
C36N33C32H204.9°35.8°
C36N33C34H21179.7°179.7°
N33C36N42H240.1°0.0°
C34N33C36N42179.9°179.7°
C34N33C36C370.3°0.4°
N33C34N35H21180.0°180.0°
N33C34N35C370.2°0.0°
C34N33C32H20175.8°144.6°
C1'N9C8C4176.8°180.0°
C1'N9C8N7178.1°180.0°
C1'N9C4N32.5°0.1°
C1'N9C4C5178.0°180.0°
C1'N9C8H41.9°0.0°
N9C1'C2'H639.9°9.9°
C36N42C40H24180.0°179.9°
C36N42C40N41179.9°179.8°
C36N42C40N390.4°0.2°
N42C36C37N35180.0°179.7°
N42C36C37C380.1°0.1°
C40N42C36C370.1°0.2°
N42C40N41N39179.6°179.9°
N42C40N39C380.4°0.1°
N42C40N41H22179.6°179.9°
N42C40N41H230.5°0.1°
C36C37N35C340.0°0.2°
C36C37N35C38179.9°179.6°
C36C37C38N390.0°0.1°
C36C37C38O43179.9°180.0°
C37C36N42H24179.9°179.9°
N41C40N39C38179.9°180.0°
C40N41H22H23180.0°180.0°
N41C40N42H240.1°0.1°
C34N35C37C38179.9°179.8°
N9C8N7H4180.0°180.0°
C8N9C4N3179.4°180.0°
C8N9C4C51.1°0.0°
N9C8N7C50.8°0.0°
C8N9C1'H5141.4°144.3°
C4N9C8N71.2°0.0°
N9C4N3C5179.4°180.0°
N9C4C5N70.6°0.0°
N9C4N3C2179.3°180.0°
N9C4C5C6179.5°179.8°
C4N9C8H4178.8°180.0°
C4N9C1'H534.9°35.7°
C40N39C38C370.2°0.1°
C40N39C38O43179.7°180.0°
N39C40N41H220.0°0.0°
N39C40N41H23180.0°180.0°
N39C40N42H24179.6°179.9°
C8N7C5C40.1°0.0°
C8N7C5C6179.8°179.8°
N35C37C38N39180.0°179.5°
N35C37C38O430.1°0.4°
C37N35C34H21179.8°180.0°
C37C38N39O43179.9°179.9°
N3C4C5N7179.8°180.0°
N3C4C5C60.1°0.2°
C4N3C2N10.2°0.0°
C4N3C2H1179.8°179.7°
C4C5N7C6179.9°179.8°
C5C4N3C20.2°0.0°
C4C5C6N10.4°0.4°
C4C5C6N01179.9°180.0°
N7C5C6N1179.8°179.8°
N7C5C6N010.0°0.3°
C5N7C8H4179.2°180.0°
N3C2N1H1180.0°179.7°
N3C2N1C60.6°0.3°
C5C6N1C20.7°0.5°
C5C6N1N01179.8°179.5°
C5C6N01H2179.8°179.5°
C5C6N01H360.3°0.5°
C2N1C6N01179.5°180.0°
C6N1C2H1179.3°179.9°
N1C6N01H20.0°0.0°
N1C6N01H3120.0°180.0°
C6N01H2H3120.0°180.0°
H5C1'C2'H684.3°130.5°
H6C2'O2'H753.4°60.8°
H6C2'C3'H882.1°117.4°
H8C3'C4'H930.7°17.2°
H9C4'C16H1065.0°125.5°
H9C4'C16H1154.4°114.5°
H13C21C22H1434.5°23.0°
H13C21C32H20154.1°137.9°
H14C22O23H1556.0°61.4°
H14C22C24H1695.7°98.4°
H16C24C25H1740.3°88.9°
H16C24C25H1879.8°31.2°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon