9PQ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C4 | C5 | doub | 1.39Å | 1.39Å | Aromatic |
C4 | C3 | sing | 1.36Å | 1.39Å | Aromatic |
C5 | C6 | sing | 1.36Å | 1.39Å | Aromatic |
C3 | C2 | doub | 1.40Å | 1.39Å | Aromatic |
C6 | C1 | doub | 1.41Å | 1.39Å | Aromatic |
C15 | C14 | doub | 1.38Å | 1.40Å | Aromatic |
C15 | C16 | sing | 1.40Å | 1.39Å | Aromatic |
C14 | C13 | sing | 1.40Å | 1.39Å | Aromatic |
C2 | C1 | sing | 1.42Å | 1.49Å | Aromatic |
C2 | C19 | sing | 1.42Å | 1.49Å | Aromatic |
O24 | C23 | doub | 1.22Å | 1.22Å | |
C1 | C22 | sing | 1.41Å | 1.39Å | Aromatic |
C23 | C16 | sing | 1.48Å | 1.50Å | |
C23 | N25 | sing | 1.35Å | 1.33Å | |
C16 | C17 | doub | 1.40Å | 1.39Å | Aromatic |
C13 | C19 | sing | 1.48Å | 1.49Å | |
C13 | C18 | doub | 1.40Å | 1.39Å | Aromatic |
C19 | C20 | doub | 1.38Å | 1.49Å | Aromatic |
N25 | C26 | sing | 1.47Å | 1.45Å | |
C26 | C27 | sing | 1.53Å | 1.53Å | |
C22 | C21 | doub | 1.36Å | 1.39Å | Aromatic |
C17 | C18 | sing | 1.38Å | 1.39Å | Aromatic |
C20 | C21 | sing | 1.39Å | 1.40Å | Aromatic |
C20 | C28 | sing | 1.51Å | 1.51Å | |
C11 | C12 | sing | 1.53Å | 1.52Å | |
C11 | O10 | sing | 1.43Å | 1.43Å | |
N7 | C12 | sing | 1.47Å | 1.47Å | |
N7 | C27 | sing | 1.47Å | 1.47Å | |
N7 | C8 | sing | 1.47Å | 1.47Å | |
C28 | O29 | sing | 1.43Å | 1.43Å | |
C9 | O10 | sing | 1.43Å | 1.43Å | |
C9 | C8 | sing | 1.53Å | 1.53Å | |
N25 | H1 | sing | 0.97Å | 1.00Å | |
C26 | H2 | sing | 1.09Å | 1.10Å | |
C26 | H3 | sing | 1.09Å | 1.10Å | |
C27 | H4 | sing | 1.09Å | 1.10Å | |
C27 | H5 | sing | 1.09Å | 1.10Å | |
C12 | H7 | sing | 1.09Å | 1.10Å | |
C12 | H8 | sing | 1.09Å | 1.10Å | |
C11 | H9 | sing | 1.09Å | 1.10Å | |
C11 | H10 | sing | 1.09Å | 1.10Å | |
C9 | H11 | sing | 1.09Å | 1.10Å | |
C9 | H12 | sing | 1.09Å | 1.10Å | |
C8 | H13 | sing | 1.09Å | 1.10Å | |
C8 | H14 | sing | 1.09Å | 1.10Å | |
C15 | H15 | sing | 1.08Å | 1.08Å | |
C14 | H16 | sing | 1.08Å | 1.08Å | |
C17 | H17 | sing | 1.08Å | 1.08Å | |
C18 | H18 | sing | 1.08Å | 1.08Å | |
C28 | H19 | sing | 1.09Å | 1.10Å | |
C28 | H20 | sing | 1.09Å | 1.10Å | |
O29 | H21 | sing | 0.97Å | 0.95Å | |
C21 | H22 | sing | 1.08Å | 1.08Å | |
C22 | H23 | sing | 1.08Å | 1.08Å | |
C6 | H24 | sing | 1.08Å | 1.08Å | |
C5 | H25 | sing | 1.08Å | 1.08Å | |
C4 | H26 | sing | 1.08Å | 1.08Å | |
C3 | H27 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C5 | C4 | C3 | 121.5° | 121.0° |
C4 | C5 | C6 | 121.3° | 121.0° |
C4 | C5 | H25 | 119.4° | 119.5° |
C5 | C4 | H26 | 119.3° | 119.5° |
C4 | C3 | C2 | 119.5° | 119.7° |
C3 | C4 | H26 | 119.3° | 119.6° |
C4 | C3 | H27 | 120.2° | 120.1° |
C5 | C6 | C1 | 119.7° | 119.6° |
C5 | C6 | H24 | 120.2° | 120.2° |
C6 | C5 | H25 | 119.4° | 119.5° |
C3 | C2 | C1 | 118.8° | 119.5° |
C3 | C2 | C19 | 123.4° | 121.3° |
C2 | C3 | H27 | 120.3° | 120.2° |
C6 | C1 | C2 | 119.3° | 119.3° |
C6 | C1 | C22 | 120.1° | 121.2° |
C1 | C6 | H24 | 120.2° | 120.1° |
C14 | C15 | C16 | 120.3° | 120.0° |
C15 | C14 | C13 | 119.9° | 120.0° |
C14 | C15 | H15 | 119.8° | 120.0° |
C15 | C14 | H16 | 120.1° | 120.0° |
C15 | C16 | C23 | 121.0° | 120.0° |
C15 | C16 | C17 | 119.4° | 120.0° |
C16 | C15 | H15 | 119.8° | 120.0° |
C14 | C13 | C19 | 122.8° | 120.0° |
C14 | C13 | C18 | 119.7° | 120.0° |
C13 | C14 | H16 | 120.1° | 120.0° |
C1 | C2 | C19 | 117.8° | 119.2° |
C2 | C1 | C22 | 120.7° | 119.6° |
C2 | C19 | C13 | 121.7° | 120.3° |
C2 | C19 | C20 | 117.6° | 119.3° |
O24 | C23 | C16 | 120.3° | 120.0° |
O24 | C23 | N25 | 122.0° | 120.0° |
C1 | C22 | C21 | 121.5° | 120.1° |
C1 | C22 | H23 | 119.2° | 120.0° |
C16 | C23 | N25 | 117.7° | 120.0° |
C23 | C16 | C17 | 119.6° | 120.0° |
C23 | N25 | C26 | 129.6° | 120.0° |
C23 | N25 | H1 | 115.2° | 120.1° |
C16 | C17 | C18 | 120.3° | 119.9° |
C16 | C17 | H17 | 119.9° | 120.0° |
C19 | C13 | C18 | 117.4° | 120.0° |
C13 | C19 | C20 | 120.7° | 120.4° |
C13 | C18 | C17 | 120.4° | 120.0° |
C13 | C18 | H18 | 119.8° | 120.0° |
C19 | C20 | C21 | 120.0° | 120.7° |
C19 | C20 | C28 | 119.4° | 119.7° |
N25 | C26 | C27 | 108.8° | 109.5° |
C26 | N25 | H1 | 115.2° | 120.0° |
N25 | C26 | H2 | 109.7° | 109.5° |
N25 | C26 | H3 | 109.6° | 109.5° |
C26 | C27 | N7 | 108.4° | 109.4° |
C27 | C26 | H2 | 109.6° | 109.5° |
C27 | C26 | H3 | 109.6° | 109.5° |
C26 | C27 | H4 | 109.7° | 109.5° |
C26 | C27 | H5 | 109.7° | 109.4° |
C22 | C21 | C20 | 122.4° | 121.2° |
C22 | C21 | H22 | 118.8° | 119.4° |
C21 | C22 | H23 | 119.2° | 119.9° |
C18 | C17 | H17 | 119.8° | 120.0° |
C17 | C18 | H18 | 119.8° | 120.0° |
C21 | C20 | C28 | 120.6° | 119.7° |
C20 | C21 | H22 | 118.8° | 119.4° |
C20 | C28 | O29 | 111.1° | 109.5° |
C20 | C28 | H19 | 109.1° | 109.4° |
C20 | C28 | H20 | 109.1° | 109.5° |
C12 | C11 | O10 | 109.3° | 109.3° |
C11 | C12 | N7 | 109.4° | 109.3° |
C11 | C12 | H7 | 109.5° | 109.5° |
C11 | C12 | H8 | 109.5° | 109.6° |
C12 | C11 | H9 | 109.5° | 109.5° |
C12 | C11 | H10 | 109.5° | 109.5° |
C11 | O10 | C9 | 113.1° | 113.7° |
O10 | C11 | H9 | 109.5° | 109.5° |
O10 | C11 | H10 | 109.5° | 109.5° |
C12 | N7 | C27 | 110.9° | 111.0° |
C12 | N7 | C8 | 109.2° | 110.7° |
N7 | C12 | H7 | 109.5° | 109.5° |
N7 | C12 | H8 | 109.5° | 109.5° |
C27 | N7 | C8 | 110.4° | 111.0° |
N7 | C27 | H4 | 109.7° | 109.5° |
N7 | C27 | H5 | 109.7° | 109.5° |
N7 | C8 | C9 | 109.2° | 109.3° |
N7 | C8 | H13 | 109.5° | 109.5° |
N7 | C8 | H14 | 109.5° | 109.5° |
O29 | C28 | H19 | 109.0° | 109.4° |
O29 | C28 | H20 | 109.1° | 109.5° |
C28 | O29 | H21 | 109.5° | 114.0° |
O10 | C9 | C8 | 110.2° | 109.3° |
O10 | C9 | H11 | 109.3° | 109.5° |
O10 | C9 | H12 | 109.3° | 109.5° |
C8 | C9 | H11 | 109.3° | 109.5° |
C8 | C9 | H12 | 109.3° | 109.5° |
C9 | C8 | H13 | 109.5° | 109.5° |
C9 | C8 | H14 | 109.6° | 109.5° |
H2 | C26 | H3 | 109.5° | 109.4° |
H4 | C27 | H5 | 109.5° | 109.5° |
H7 | C12 | H8 | 109.4° | 109.5° |
H9 | C11 | H10 | 109.5° | 109.5° |
H11 | C9 | H12 | 109.5° | 109.5° |
H13 | C8 | H14 | 109.5° | 109.6° |
H19 | C28 | H20 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C5 | C4 | C3 | H26 | 180.0° | 179.9° |
C4 | C5 | C6 | H25 | 180.0° | 179.9° |
C5 | C4 | C3 | C2 | 0.2° | 0.1° |
C4 | C5 | C6 | C1 | 0.0° | 0.0° |
C4 | C5 | C6 | H24 | 180.0° | 179.9° |
C5 | C4 | C3 | H27 | 179.8° | 180.0° |
C3 | C4 | C5 | C6 | 0.2° | 0.1° |
C4 | C3 | C2 | H27 | 180.0° | 179.9° |
C4 | C3 | C2 | C1 | 0.0° | 0.1° |
C4 | C3 | C2 | C19 | 179.6° | 180.0° |
C3 | C4 | C5 | H25 | 179.8° | 180.0° |
C5 | C6 | C1 | H24 | 180.0° | 180.0° |
C5 | C6 | C1 | C2 | 0.1° | 0.0° |
C5 | C6 | C1 | C22 | 179.7° | 179.9° |
C6 | C5 | C4 | H26 | 179.9° | 179.9° |
C3 | C2 | C1 | C6 | 0.1° | 0.0° |
C3 | C2 | C1 | C19 | 179.6° | 180.0° |
C3 | C2 | C1 | C22 | 179.7° | 179.9° |
C3 | C2 | C19 | C13 | 1.6° | 0.1° |
C3 | C2 | C19 | C20 | 179.8° | 179.7° |
C2 | C3 | C4 | H26 | 179.8° | 179.9° |
C6 | C1 | C2 | C22 | 179.8° | 179.9° |
C6 | C1 | C2 | C19 | 179.7° | 179.9° |
C6 | C1 | C22 | C21 | 179.9° | 179.7° |
C6 | C1 | C22 | H23 | 0.1° | 0.1° |
C1 | C6 | C5 | H25 | 180.0° | 180.0° |
C14 | C15 | C16 | H15 | 180.0° | 180.0° |
C15 | C14 | C13 | H16 | 180.0° | 179.9° |
C14 | C15 | C16 | C23 | 179.4° | 180.0° |
C14 | C15 | C16 | C17 | 0.1° | 0.3° |
C15 | C14 | C13 | C19 | 179.3° | 180.0° |
C15 | C14 | C13 | C18 | 1.0° | 0.3° |
C16 | C15 | C14 | C13 | 0.5° | 0.0° |
C15 | C16 | C23 | O24 | 15.9° | 179.7° |
C15 | C16 | C23 | C17 | 179.3° | 179.7° |
C15 | C16 | C23 | N25 | 163.6° | 0.0° |
C15 | C16 | C17 | C18 | 0.3° | 0.4° |
C16 | C15 | C14 | H16 | 179.5° | 180.0° |
C15 | C16 | C17 | H17 | 179.7° | 179.8° |
C14 | C13 | C19 | C2 | 119.5° | 114.7° |
C14 | C13 | C19 | C18 | 178.3° | 179.7° |
C14 | C13 | C19 | C20 | 62.3° | 64.9° |
C14 | C13 | C18 | C17 | 1.1° | 0.3° |
C13 | C14 | C15 | H15 | 179.5° | 180.0° |
C14 | C13 | C18 | H18 | 178.9° | 179.7° |
C1 | C2 | C19 | C13 | 178.8° | 180.0° |
C1 | C2 | C19 | C20 | 0.6° | 0.3° |
C2 | C1 | C22 | C21 | 0.1° | 0.3° |
C2 | C1 | C22 | H23 | 179.9° | 180.0° |
C2 | C1 | C6 | H24 | 179.9° | 180.0° |
C1 | C2 | C3 | H27 | 180.0° | 180.0° |
C19 | C2 | C1 | C22 | 0.1° | 0.0° |
C2 | C19 | C13 | C20 | 178.1° | 179.7° |
C2 | C19 | C13 | C18 | 62.1° | 65.6° |
C2 | C19 | C20 | C21 | 0.8° | 0.3° |
C2 | C19 | C20 | C28 | 179.6° | 179.7° |
C19 | C2 | C3 | H27 | 0.4° | 0.1° |
O24 | C23 | C16 | N25 | 179.5° | 179.8° |
O24 | C23 | C16 | C17 | 164.8° | 0.1° |
O24 | C23 | N25 | C26 | 0.4° | 0.0° |
O24 | C23 | N25 | H1 | 179.5° | 180.0° |
C1 | C22 | C21 | H23 | 180.0° | 179.6° |
C1 | C22 | C21 | C20 | 0.2° | 0.4° |
C1 | C22 | C21 | H22 | 179.8° | 179.6° |
C22 | C1 | C6 | H24 | 0.3° | 0.1° |
C16 | C23 | N25 | C26 | 179.1° | 179.7° |
C23 | C16 | C17 | C18 | 179.6° | 180.0° |
C16 | C23 | N25 | H1 | 0.9° | 0.2° |
C23 | C16 | C15 | H15 | 0.5° | 0.0° |
C23 | C16 | C17 | H17 | 0.4° | 0.1° |
N25 | C23 | C16 | C17 | 15.7° | 179.7° |
C23 | N25 | C26 | H1 | 180.0° | 180.0° |
C23 | N25 | C26 | C27 | 71.9° | 180.0° |
C23 | N25 | C26 | H2 | 168.2° | 60.0° |
C23 | N25 | C26 | H3 | 48.0° | 60.0° |
C16 | C17 | C18 | C13 | 0.8° | 0.1° |
C16 | C17 | C18 | H17 | 180.0° | 179.9° |
C17 | C16 | C15 | H15 | 179.8° | 179.7° |
C16 | C17 | C18 | H18 | 179.2° | 180.0° |
C19 | C13 | C18 | C17 | 179.5° | 180.0° |
C13 | C19 | C20 | C21 | 179.1° | 180.0° |
C13 | C19 | C20 | C28 | 1.4° | 0.0° |
C19 | C13 | C14 | H16 | 0.7° | 0.1° |
C19 | C13 | C18 | H18 | 0.5° | 0.0° |
C18 | C13 | C19 | C20 | 116.0° | 114.7° |
C13 | C18 | C17 | H18 | 180.0° | 179.9° |
C18 | C13 | C14 | H16 | 179.0° | 179.7° |
C13 | C18 | C17 | H17 | 179.2° | 179.9° |
C19 | C20 | C21 | C22 | 0.7° | 0.0° |
C19 | C20 | C21 | C28 | 179.5° | 180.0° |
C19 | C20 | C28 | O29 | 157.0° | 180.0° |
C19 | C20 | C28 | H19 | 36.7° | 60.0° |
C19 | C20 | C28 | H20 | 82.7° | 60.0° |
C19 | C20 | C21 | H22 | 179.3° | 180.0° |
N25 | C26 | C27 | H2 | 119.9° | 120.0° |
N25 | C26 | C27 | H3 | 119.9° | 120.0° |
N25 | C26 | C27 | N7 | 159.8° | 180.0° |
N25 | C26 | H2 | H3 | 120.3° | 120.0° |
N25 | C26 | C27 | H4 | 39.9° | 60.0° |
N25 | C26 | C27 | H5 | 80.4° | 60.1° |
C26 | C27 | N7 | C12 | 74.6° | 170.0° |
C26 | C27 | N7 | H4 | 119.8° | 120.0° |
C26 | C27 | N7 | H5 | 119.8° | 119.9° |
C26 | C27 | N7 | C8 | 164.1° | 66.4° |
C27 | C26 | N25 | H1 | 108.1° | 0.0° |
C27 | C26 | H2 | H3 | 120.3° | 120.0° |
C26 | C27 | H4 | H5 | 120.5° | 120.0° |
C22 | C21 | C20 | H22 | 180.0° | 180.0° |
C22 | C21 | C20 | C28 | 179.7° | 179.9° |
C21 | C20 | C28 | O29 | 23.5° | 0.0° |
C21 | C20 | C28 | H19 | 143.7° | 120.0° |
C21 | C20 | C28 | H20 | 96.8° | 120.0° |
C20 | C21 | C22 | H23 | 179.8° | 180.0° |
C20 | C28 | O29 | H19 | 120.2° | 119.9° |
C20 | C28 | O29 | H20 | 120.3° | 120.0° |
C20 | C28 | H19 | H20 | 119.2° | 120.0° |
C20 | C28 | O29 | H21 | 180.0° | 180.0° |
C28 | C20 | C21 | H22 | 0.3° | 0.1° |
C12 | C11 | O10 | H9 | 120.0° | 119.9° |
C12 | C11 | O10 | H10 | 120.0° | 119.9° |
C11 | C12 | N7 | H7 | 120.0° | 119.9° |
C11 | C12 | N7 | H8 | 120.0° | 120.0° |
C11 | C12 | N7 | C27 | 177.9° | 177.6° |
C11 | C12 | N7 | C8 | 60.2° | 58.6° |
C12 | C11 | O10 | C9 | 58.1° | 58.6° |
C11 | C12 | H7 | H8 | 120.1° | 120.1° |
C12 | C11 | H9 | H10 | 120.1° | 120.1° |
O10 | C11 | C12 | N7 | 58.5° | 56.8° |
C11 | O10 | C9 | C8 | 57.7° | 58.6° |
O10 | C11 | C12 | H7 | 178.5° | 63.1° |
O10 | C11 | C12 | H8 | 61.5° | 176.8° |
O10 | C11 | H9 | H10 | 120.0° | 120.1° |
C11 | O10 | C9 | H11 | 177.8° | 178.6° |
C11 | O10 | C9 | H12 | 62.4° | 61.3° |
C12 | N7 | C27 | C8 | 121.2° | 123.6° |
C12 | N7 | C8 | C9 | 59.2° | 58.6° |
C12 | N7 | C27 | H4 | 165.6° | 70.0° |
C12 | N7 | C27 | H5 | 45.2° | 50.1° |
N7 | C12 | H7 | H8 | 120.0° | 120.1° |
N7 | C12 | C11 | H9 | 178.5° | 176.8° |
N7 | C12 | C11 | H10 | 61.5° | 63.1° |
C12 | N7 | C8 | H13 | 179.2° | 178.5° |
C12 | N7 | C8 | H14 | 60.7° | 61.3° |
C27 | N7 | C8 | C9 | 178.5° | 177.7° |
N7 | C27 | C26 | H2 | 80.3° | 60.0° |
N7 | C27 | C26 | H3 | 39.9° | 60.0° |
N7 | C27 | H4 | H5 | 120.5° | 120.0° |
C27 | N7 | C12 | H7 | 57.9° | 62.4° |
C27 | N7 | C12 | H8 | 62.1° | 57.6° |
C27 | N7 | C8 | H13 | 58.6° | 57.8° |
C27 | N7 | C8 | H14 | 61.5° | 62.4° |
N7 | C8 | C9 | O10 | 57.2° | 56.8° |
N7 | C8 | C9 | H13 | 119.9° | 119.9° |
N7 | C8 | C9 | H14 | 120.0° | 119.9° |
C8 | N7 | C27 | H4 | 44.3° | 53.6° |
C8 | N7 | C27 | H5 | 76.0° | 173.7° |
C8 | N7 | C12 | H7 | 179.8° | 61.4° |
C8 | N7 | C12 | H8 | 59.8° | 178.6° |
N7 | C8 | C9 | H11 | 177.3° | 176.8° |
N7 | C8 | C9 | H12 | 62.9° | 63.1° |
N7 | C8 | H13 | H14 | 120.1° | 120.1° |
O29 | C28 | H19 | H20 | 119.2° | 120.0° |
O10 | C9 | C8 | H11 | 120.1° | 120.0° |
O10 | C9 | C8 | H12 | 120.1° | 119.9° |
C9 | O10 | C11 | H9 | 178.0° | 178.6° |
C9 | O10 | C11 | H10 | 61.9° | 61.3° |
O10 | C9 | H11 | H12 | 119.7° | 120.1° |
O10 | C9 | C8 | H13 | 177.1° | 176.7° |
O10 | C9 | C8 | H14 | 62.8° | 63.1° |
C8 | C9 | H11 | H12 | 119.7° | 120.1° |
C9 | C8 | H13 | H14 | 120.2° | 120.1° |
H1 | N25 | C26 | H2 | 11.8° | 120.1° |
H1 | N25 | C26 | H3 | 132.1° | 120.0° |
H2 | C26 | C27 | H4 | 159.9° | 180.0° |
H2 | C26 | C27 | H5 | 39.5° | 60.0° |
H3 | C26 | C27 | H4 | 79.9° | 60.0° |
H3 | C26 | C27 | H5 | 159.7° | 180.0° |
H7 | C12 | C11 | H9 | 61.6° | 56.9° |
H7 | C12 | C11 | H10 | 58.5° | 177.0° |
H8 | C12 | C11 | H9 | 58.4° | 63.2° |
H8 | C12 | C11 | H10 | 178.5° | 56.9° |
H11 | C9 | C8 | H13 | 62.8° | 63.3° |
H11 | C9 | C8 | H14 | 57.3° | 56.9° |
H12 | C9 | C8 | H13 | 57.0° | 56.8° |
H12 | C9 | C8 | H14 | 177.1° | 177.0° |
H15 | C15 | C14 | H16 | 0.5° | 0.1° |
H17 | C17 | C18 | H18 | 0.8° | 0.1° |
H19 | C28 | O29 | H21 | 59.7° | 60.1° |
H20 | C28 | O29 | H21 | 59.8° | 60.0° |
H22 | C21 | C22 | H23 | 0.2° | 0.0° |
H24 | C6 | C5 | H25 | 0.0° | 0.0° |
H25 | C5 | C4 | H26 | 0.2° | 0.0° |
H26 | C4 | C3 | H27 | 0.2° | 0.0° |