Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9D8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C8doub1.38Å1.37ÅAromatic
C9C10sing1.38Å1.37ÅAromatic
C8C7sing1.38Å1.38ÅAromatic
C10C5doub1.38Å1.39ÅAromatic
C7C6doub1.38Å1.38ÅAromatic
C5C6sing1.38Å1.38ÅAromatic
C5C4sing1.51Å1.51Å
C4Nsing1.47Å1.46Å
NC1sing1.47Å1.47Å
NCsing1.35Å1.36Å
C2C3sing1.53Å1.53Å
C2C1sing1.53Å1.52Å
O1Sdoub1.42Å1.43Å
C13C12doub1.38Å1.40ÅAromatic
C13C14sing1.38Å1.39ÅAromatic
C12C11sing1.40Å1.38ÅAromatic
O2Sdoub1.42Å1.43Å
C14Ssing1.76Å1.77Å
C14C21doub1.38Å1.37ÅAromatic
SN1sing1.66Å1.62Å
C11Csing1.48Å1.49Å
C11C22doub1.40Å1.40ÅAromatic
COdoub1.22Å1.20Å
C21C22sing1.38Å1.38ÅAromatic
N1C15sing1.40Å1.39Å
C15C16doub1.39Å1.39ÅAromatic
C15C20sing1.39Å1.38ÅAromatic
C16C17sing1.38Å1.37ÅAromatic
C20C19doub1.38Å1.38ÅAromatic
C17CLsing1.74Å1.73Å
C17C18doub1.38Å1.38ÅAromatic
C19C18sing1.38Å1.37ÅAromatic
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
C4H6sing1.09Å1.10Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C12H11sing1.08Å1.08Å
C13H12sing1.08Å1.08Å
C16H13sing1.08Å1.08Å
C18H14sing1.08Å1.08Å
C19H15sing1.08Å1.08Å
C20H16sing1.08Å1.08Å
C21H17sing1.08Å1.08Å
C22H18sing1.08Å1.08Å
N1H19sing0.97Å1.00Å
C3H20sing1.09Å1.10Å
C3H21sing1.09Å1.10Å
C3H22sing1.09Å1.10Å
C6H23sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C9C10120.2°120.0°
C9C8C7119.7°119.9°
C9C8H8120.1°120.1°
C8C9H9119.9°120.0°
C9C10C5120.7°120.0°
C10C9H9119.9°120.0°
C9C10H10119.7°120.0°
C8C7C6119.8°120.0°
C8C7H7120.1°119.9°
C7C8H8120.2°120.0°
C10C5C6118.5°120.0°
C10C5C4120.1°120.0°
C5C10H10119.6°120.0°
C7C6C5120.8°120.0°
C6C7H7120.1°120.0°
C7C6H23119.6°120.0°
C6C5C4121.3°120.0°
C5C6H23119.6°120.0°
C5C4N115.3°109.5°
C5C4H5108.0°109.5°
C5C4H6108.0°109.5°
C4NC1114.1°120.0°
C4NC124.2°120.0°
NC4H5108.0°109.5°
NC4H6108.0°109.5°
C1NC121.7°120.0°
NC1C2112.2°109.4°
NC1H1108.8°109.5°
NC1H2108.8°109.4°
NCC11120.4°120.0°
NCO122.5°120.0°
C3C2C1110.2°109.4°
C3C2H3109.3°109.5°
C3C2H4109.3°109.5°
C2C3H20109.5°109.5°
C2C3H21109.5°109.5°
C2C3H22109.5°109.5°
C2C1H1108.8°109.5°
C2C1H2108.8°109.5°
C1C2H3109.3°109.5°
C1C2H4109.3°109.5°
O1SO2120.9°123.2°
O1SC14109.0°106.4°
O1SN1107.5°106.4°
C12C13C14119.6°120.1°
C13C12C11120.5°119.9°
C13C12H11119.8°120.1°
C12C13H12120.2°119.9°
C13C14S120.0°119.8°
C13C14C21120.5°120.3°
C14C13H12120.2°119.9°
C12C11C124.1°120.1°
C12C11C22118.6°119.7°
C11C12H11119.7°120.0°
O2SC14107.8°106.4°
O2SN1105.2°106.4°
SC14C21119.0°119.8°
C14SN1105.4°107.2°
C14C21C22119.6°120.1°
C14C21H17120.2°119.9°
SN1C15144.1°120.0°
SN1H19100.3°120.0°
CC11C22117.2°120.2°
C11CO117.1°120.0°
C11C22C21121.2°119.9°
C11C22H18119.4°120.1°
C22C21H17120.2°120.0°
C21C22H18119.4°120.1°
N1C15C16107.3°120.1°
N1C15C20130.0°120.1°
C15N1H19100.3°120.0°
C16C15C20119.9°119.8°
C15C16C17118.6°119.9°
C15C16H13120.7°120.0°
C15C20C19120.2°120.0°
C15C20H16119.9°120.0°
C16C17CL118.6°120.0°
C16C17C18122.1°120.1°
C17C16H13120.7°120.1°
C20C19C18120.7°120.1°
C20C19H15119.7°120.0°
C19C20H16119.9°120.1°
CLC17C18119.3°120.0°
C17C18C19118.4°120.1°
C17C18H14120.8°120.0°
C19C18H14120.8°119.9°
C18C19H15119.6°120.0°
H1C1H2109.5°109.5°
H3C2H4109.5°109.5°
H5C4H6109.5°109.5°
H20C3H21109.5°109.4°
H20C3H22109.4°109.5°
H21C3H22109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C9C10H9180.0°179.1°
C9C8C7H8180.0°179.4°
C8C9C10C53.9°0.6°
C9C8C7C60.2°0.6°
C9C8C7H7179.8°179.4°
C8C9C10H10176.1°179.4°
C10C9C8C73.7°0.9°
C9C10C5H10180.0°180.0°
C9C10C5C60.3°0.0°
C9C10C5C4178.3°179.7°
C10C9C8H8176.3°179.7°
C8C7C6H7180.0°180.0°
C8C7C6C53.8°0.0°
C7C8C9H9176.3°179.9°
C8C7C6H23176.1°179.9°
C10C5C6C73.6°0.3°
C10C5C6C4178.5°179.7°
C10C5C4N145.6°89.7°
C10C5C4H524.8°30.3°
C10C5C4H693.5°150.3°
C5C10C9H9176.1°179.7°
C10C5C6H23176.4°179.7°
C7C6C5H23180.0°179.9°
C7C6C5C4177.9°180.0°
C6C7C8H8179.9°180.0°
C6C5C4N35.9°90.0°
C6C5C4H5156.7°150.0°
C6C5C4H685.0°30.0°
C5C6C7H7176.2°180.0°
C6C5C10H10179.8°180.0°
C5C4NH5120.8°120.0°
C5C4NH6120.9°120.0°
C5C4NC164.6°90.0°
C5C4NC118.2°90.0°
C5C4H5H6117.4°120.0°
C4C5C10H101.7°0.3°
C4C5C6H232.1°0.0°
C4NC1C177.4°180.0°
C4NC1C281.0°82.5°
C4NCC114.4°173.8°
C4NCO173.3°6.2°
C4NC1H1158.6°157.5°
C4NC1H239.4°37.5°
NC4H5H6117.4°120.0°
NC1C2C3176.0°173.7°
NC1C2H1120.4°120.0°
NC1C2H2120.4°119.9°
C1NCC11178.5°6.2°
C1NCO3.8°173.8°
NC1H1H2118.7°119.9°
NC1C2H363.9°53.7°
NC1C2H455.9°66.4°
C1NC4H556.3°30.0°
C1NC4H6174.6°150.0°
CNC1C296.3°97.5°
NCC11C1271.2°34.3°
NCC11O177.9°180.0°
NCC11C22110.4°145.3°
CNC1H124.1°22.5°
CNC1H2143.2°142.5°
CNC4H5121.0°150.0°
CNC4H62.7°30.0°
C3C2C1H3120.1°120.0°
C3C2C1H4120.1°120.0°
C3C2C1H163.6°53.7°
C3C2C1H255.6°66.4°
C3C2H3H4119.7°120.0°
C2C3H20H21120.0°120.0°
C2C3H20H22120.0°120.0°
C2C3H21H22120.0°120.1°
C2C1H1H2118.8°120.1°
C1C2H3H4119.7°120.0°
C1C2C3H20180.0°60.0°
C1C2C3H2160.0°180.0°
C1C2C3H2260.0°60.0°
O1SC14C13132.5°160.8°
O1SO2C14126.2°123.0°
O1SO2N1121.8°122.9°
O1SC14N1115.2°113.5°
O1SC14C2155.6°19.1°
O1SN1C15140.3°176.7°
O1SN1H1916.4°3.4°
C12C13C14H12180.0°180.0°
C13C12C11H11180.0°179.9°
C12C13C14S171.3°180.0°
C12C13C14C210.4°0.1°
C13C12C11C177.3°180.0°
C13C12C11C221.1°0.3°
C14C13C12C111.1°0.1°
C13C14SO20.4°27.9°
C13C14SC21171.9°179.9°
C13C14SN1112.3°85.7°
C13C14C21C222.0°0.4°
C14C13C12H11178.9°180.0°
C13C14C21H17178.0°179.9°
C12C11CC22178.4°179.6°
C12C11CO111.0°145.7°
C12C11C22C210.5°0.6°
C11C12C13H12178.9°180.0°
C12C11C22H18179.5°179.8°
O2SC14N1111.9°113.5°
O2SC14C21171.5°152.1°
O2SN1C1589.6°50.4°
O2SN1H19146.5°129.5°
SC14C21C22169.8°179.7°
C14SN1C1524.2°63.1°
SC14C13H128.7°0.1°
SC14C21H1710.2°0.0°
C14SN1H1999.7°116.9°
C21C14SN159.6°94.4°
C14C21C22C112.1°0.6°
C14C21C22H17180.0°179.7°
C21C14C13H12179.6°180.0°
C14C21C22H18177.9°179.7°
SN1C15H19123.9°179.9°
SN1C15C1689.3°133.0°
SN1C15C2071.4°47.3°
CC11C22C21179.0°179.7°
CC11C12H112.7°0.1°
CC11C22H181.0°0.1°
C22C11CO67.4°34.7°
C11C22C21H18180.0°179.6°
C22C11C12H11178.9°179.7°
C11C22C21H17177.9°179.6°
N1C15C16C20163.0°179.6°
N1C15C16C17162.9°179.7°
N1C15C20C19160.3°179.8°
N1C15C16H1317.1°0.4°
N1C15C20H1619.7°0.4°
C15C16C17H13180.0°179.9°
C16C15C20C191.7°0.1°
C15C16C17CL176.8°180.0°
C15C16C17C182.3°0.0°
C16C15C20H16178.3°180.0°
C16C15N1H19146.8°47.1°
C20C15C16C170.1°0.1°
C15C20C19H16180.0°179.8°
C15C20C19C181.3°0.1°
C20C15C16H13179.9°180.0°
C15C20C19H15178.7°179.9°
C20C15N1H1952.6°132.6°
C16C17CLC18179.1°180.0°
C16C17C18C192.6°0.0°
C16C17C18H14177.4°179.9°
C20C19C18C170.8°0.1°
C20C19C18H15180.0°180.0°
C20C19C18H14179.2°180.0°
CLC17C18C19176.4°180.0°
CLC17C16H133.2°0.0°
CLC17C18H143.6°0.0°
C17C18C19H14180.0°179.9°
C18C17C16H13177.7°179.9°
C17C18C19H15179.2°179.9°
C18C19C20H16178.7°180.0°
H1C1C2H356.5°66.3°
H1C1C2H4176.4°173.6°
H2C1C2H3175.7°173.6°
H2C1C2H464.5°53.5°
H3C2C3H2059.9°59.9°
H3C2C3H2160.1°60.0°
H3C2C3H22179.9°180.0°
H4C2C3H2059.9°180.0°
H4C2C3H21179.9°60.1°
H4C2C3H2260.1°60.0°
H7C7C8H80.1°0.1°
H7C7C6H233.9°0.0°
H8C8C9H93.7°0.6°
H9C9C10H103.9°0.3°
H11C12C13H121.1°0.0°
H14C18C19H150.8°0.0°
H15C19C20H161.3°0.0°
H17C21C22H182.0°0.0°
H20C3H21H22119.9°120.0°

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon