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Summary Geometry Related PDB entries

8WO

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C8	N1	sing	1.46Å	1.45Å
N1	C2	sing	1.47Å	1.33Å
N1	C1	sing	1.37Å	1.33Å
C2	C3	sing	1.51Å	1.38Å
N2	C6	sing	1.35Å	1.38Å
O2	C1	sing	1.35Å	1.38Å
O2	C7	sing	1.43Å	1.42Å
C1	C5	doub	1.37Å	1.38Å
C3	C6	sing	1.40Å	1.48Å
C3	C4	doub	1.36Å	1.38Å
C6	O1	doub	1.22Å	1.23Å
C5	C4	sing	1.40Å	1.37Å
C4	H1	sing	1.08Å	1.08Å
C5	H2	sing	1.08Å	1.08Å
C2	H3	sing	1.09Å	1.10Å
C8	H4	sing	1.09Å	1.10Å
C8	H5	sing	1.09Å	1.10Å
C8	H6	sing	1.09Å	1.10Å
C7	H7	sing	1.09Å	1.10Å
C7	H8	sing	1.09Å	1.10Å
C7	H9	sing	1.09Å	1.10Å
N2	H10	sing	0.97Å	1.00Å
N2	H11	sing	0.97Å	1.00Å
C2	H12	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C8	N1	C2	119.1°	120.4°
C8	N1	C1	119.6°	120.5°
N1	C8	H4	109.5°	109.5°
N1	C8	H5	109.5°	109.5°
N1	C8	H6	109.4°	109.5°
C2	N1	C1	121.3°	119.1°
N1	C2	C3	119.3°	109.2°
N1	C2	H3	106.9°	109.5°
N1	C2	H12	107.0°	109.5°
N1	C1	O2	119.6°	120.3°
N1	C1	C5	120.7°	119.4°
C2	C3	C6	121.1°	120.0°
C2	C3	C4	121.0°	120.0°
C3	C2	H3	107.0°	109.5°
C3	C2	H12	106.9°	109.5°
N2	C6	C3	113.4°	120.0°
N2	C6	O1	127.1°	120.0°
C6	N2	H10	120.0°	120.0°
C6	N2	H11	120.0°	120.0°
C1	O2	C7	107.9°	117.0°
O2	C1	C5	119.7°	120.3°
O2	C7	H7	109.5°	109.5°
O2	C7	H8	109.5°	109.5°
O2	C7	H9	109.5°	109.5°
C1	C5	C4	119.8°	120.3°
C1	C5	H2	120.1°	119.9°
C6	C3	C4	118.0°	120.0°
C3	C6	O1	119.5°	120.0°
C3	C4	C5	117.9°	120.7°
C3	C4	H1	121.0°	119.7°
C5	C4	H1	121.0°	119.6°
C4	C5	H2	120.1°	119.8°
H3	C2	H12	109.5°	109.5°
H4	C8	H5	109.5°	109.4°
H4	C8	H6	109.5°	109.5°
H5	C8	H6	109.4°	109.4°
H7	C7	H8	109.4°	109.5°
H7	C7	H9	109.5°	109.5°
H8	C7	H9	109.5°	109.5°
H10	N2	H11	120.0°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C8	N1	C2	C1	179.7°	179.8°
C8	N1	C2	C3	179.5°	140.7°
C8	N1	C1	O2	0.2°	30.3°
C8	N1	C1	C5	179.8°	149.7°
C8	N1	C2	H3	59.1°	99.4°
N1	C8	H4	H5	120.0°	120.0°
N1	C8	H4	H6	120.0°	120.0°
N1	C8	H5	H6	120.0°	120.0°
C8	N1	C2	H12	58.1°	20.8°
N1	C2	C3	H3	121.4°	120.0°
N1	C2	C3	H12	121.4°	119.9°
C2	N1	C1	O2	179.9°	149.5°
C2	N1	C1	C5	0.1°	30.5°
N1	C2	C3	C6	179.6°	153.5°
N1	C2	C3	C4	0.3°	26.6°
N1	C2	H3	H12	115.5°	120.2°
C2	N1	C8	H4	180.0°	95.1°
C2	N1	C8	H5	60.0°	144.9°
C2	N1	C8	H6	60.0°	24.9°
C1	N1	C2	C3	0.2°	39.5°
N1	C1	O2	C5	180.0°	180.0°
N1	C1	O2	C7	179.8°	174.7°
N1	C1	C5	C4	0.4°	4.7°
N1	C1	C5	H2	179.6°	175.2°
C1	N1	C2	H3	121.2°	80.4°
C1	N1	C8	H4	0.3°	85.2°
C1	N1	C8	H5	119.7°	34.8°
C1	N1	C8	H6	120.3°	154.8°
C1	N1	C2	H12	121.6°	159.4°
C2	C3	C6	N2	7.0°	0.0°
C2	C3	C6	C4	179.3°	180.0°
C2	C3	C6	O1	172.8°	180.0°
C2	C3	C4	C5	0.0°	4.5°
C2	C3	C4	H1	180.0°	175.2°
C3	C2	H3	H12	115.5°	120.1°
N2	C6	C3	O1	179.8°	180.0°
N2	C6	C3	C4	173.7°	180.0°
C6	N2	H10	H11	180.0°	179.9°
O2	C1	C5	C4	179.6°	175.4°
O2	C1	C5	H2	0.4°	4.8°
C1	O2	C7	H7	180.0°	175.1°
C1	O2	C7	H8	60.0°	55.1°
C1	O2	C7	H9	60.0°	64.9°
C7	O2	C1	C5	0.2°	5.3°
O2	C7	H7	H8	120.0°	120.0°
O2	C7	H7	H9	120.0°	120.0°
O2	C7	H8	H9	120.0°	120.0°
C1	C5	C4	C3	0.3°	8.2°
C1	C5	C4	H2	180.0°	179.9°
C1	C5	C4	H1	179.7°	172.1°
C6	C3	C4	C5	179.3°	175.5°
C6	C3	C4	H1	0.7°	4.8°
C6	C3	C2	H3	58.2°	86.6°
C3	C6	N2	H10	179.8°	0.1°
C3	C6	N2	H11	0.2°	180.0°
C6	C3	C2	H12	59.0°	33.5°
C4	C3	C6	O1	6.5°	0.0°
C3	C4	C5	H1	180.0°	179.7°
C3	C4	C5	H2	179.6°	171.9°
C4	C3	C2	H3	121.1°	93.4°
C4	C3	C2	H12	121.7°	146.5°
O1	C6	N2	H10	0.0°	180.0°
O1	C6	N2	H11	180.0°	0.1°
H1	C4	C5	H2	0.4°	7.8°
H4	C8	H5	H6	120.0°	120.0°
H7	C7	H8	H9	120.0°	120.0°

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