8V5
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C10 | C9 | sing | 1.53Å | 1.51Å | |
C10 | N2 | sing | 1.47Å | 1.44Å | |
C9 | O8 | sing | 1.43Å | 1.49Å | |
N2 | C16 | sing | 1.35Å | 1.33Å | |
N2 | C6 | sing | 1.47Å | 1.36Å | |
O8 | C7 | sing | 1.43Å | 1.43Å | |
O25 | C16 | doub | 1.22Å | 1.23Å | |
C16 | C14 | sing | 1.47Å | 1.50Å | |
C7 | C6 | sing | 1.53Å | 1.53Å | |
C14 | N13 | doub | 1.31Å | 1.31Å | Aromatic |
C14 | O15 | sing | 1.35Å | 1.35Å | Aromatic |
N13 | C12 | sing | 1.33Å | 1.38Å | Aromatic |
O15 | C11 | sing | 1.35Å | 1.38Å | Aromatic |
C12 | C11 | doub | 1.38Å | 1.35Å | Aromatic |
C11 | C3 | sing | 1.47Å | 1.45Å | |
C3 | C4 | doub | 1.36Å | 1.38Å | Aromatic |
C3 | S2 | sing | 1.76Å | 1.74Å | Aromatic |
C4 | C5 | sing | 1.38Å | 1.41Å | Aromatic |
S2 | C1 | sing | 1.76Å | 1.72Å | Aromatic |
C5 | C1 | doub | 1.34Å | 1.37Å | Aromatic |
C1 | S1 | sing | 1.76Å | 1.76Å | |
N24 | S1 | sing | 1.66Å | 1.58Å | |
O22 | S1 | doub | 1.42Å | 1.43Å | |
S1 | O23 | doub | 1.42Å | 1.43Å | |
C4 | H1 | sing | 1.08Å | 1.08Å | |
C5 | H2 | sing | 1.08Å | 1.08Å | |
C12 | H3 | sing | 1.08Å | 1.08Å | |
N24 | H4 | sing | 0.97Å | 1.00Å | |
N24 | H5 | sing | 0.97Å | 1.00Å | |
C6 | H6 | sing | 1.09Å | 1.10Å | |
C6 | H7 | sing | 1.09Å | 1.10Å | |
C7 | H8 | sing | 1.09Å | 1.10Å | |
C7 | H9 | sing | 1.09Å | 1.10Å | |
C9 | H10 | sing | 1.09Å | 1.10Å | |
C9 | H11 | sing | 1.09Å | 1.10Å | |
C10 | H12 | sing | 1.09Å | 1.10Å | |
C10 | H13 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C9 | C10 | N2 | 110.4° | 108.6° |
C10 | C9 | O8 | 113.1° | 109.3° |
C10 | C9 | H10 | 108.6° | 109.6° |
C10 | C9 | H11 | 108.6° | 109.4° |
C9 | C10 | H12 | 109.3° | 109.7° |
C9 | C10 | H13 | 109.3° | 109.7° |
C10 | N2 | C16 | 120.3° | 121.0° |
C10 | N2 | C6 | 117.1° | 118.0° |
N2 | C10 | H12 | 109.2° | 109.8° |
N2 | C10 | H13 | 109.2° | 109.3° |
C9 | O8 | C7 | 113.7° | 114.2° |
O8 | C9 | H10 | 108.6° | 109.5° |
O8 | C9 | H11 | 108.5° | 109.5° |
C16 | N2 | C6 | 120.0° | 121.0° |
N2 | C16 | O25 | 122.3° | 120.0° |
N2 | C16 | C14 | 118.2° | 120.0° |
N2 | C6 | C7 | 113.9° | 108.4° |
N2 | C6 | H6 | 108.4° | 109.7° |
N2 | C6 | H7 | 108.4° | 109.7° |
O8 | C7 | C6 | 111.1° | 109.2° |
O8 | C7 | H8 | 109.1° | 109.5° |
O8 | C7 | H9 | 109.1° | 109.6° |
O25 | C16 | C14 | 119.4° | 120.0° |
C16 | C14 | N13 | 126.6° | 125.4° |
C16 | C14 | O15 | 119.9° | 125.4° |
C7 | C6 | H6 | 108.3° | 109.7° |
C7 | C6 | H7 | 108.3° | 109.7° |
C6 | C7 | H8 | 109.1° | 109.5° |
C6 | C7 | H9 | 109.1° | 109.5° |
N13 | C14 | O15 | 113.3° | 109.1° |
C14 | N13 | C12 | 104.4° | 109.1° |
C14 | O15 | C11 | 105.2° | 107.6° |
N13 | C12 | C11 | 110.4° | 107.5° |
N13 | C12 | H3 | 124.8° | 126.2° |
O15 | C11 | C12 | 106.7° | 106.7° |
O15 | C11 | C3 | 116.0° | 126.7° |
C12 | C11 | C3 | 137.3° | 126.6° |
C11 | C12 | H3 | 124.8° | 126.3° |
C11 | C3 | C4 | 123.4° | 125.3° |
C11 | C3 | S2 | 126.2° | 125.3° |
C4 | C3 | S2 | 110.4° | 109.3° |
C3 | C4 | C5 | 113.6° | 114.4° |
C3 | C4 | H1 | 123.2° | 122.8° |
C3 | S2 | C1 | 91.6° | 91.1° |
C4 | C5 | C1 | 112.4° | 115.2° |
C5 | C4 | H1 | 123.2° | 122.8° |
C4 | C5 | H2 | 123.8° | 122.4° |
S2 | C1 | C5 | 112.0° | 110.0° |
S2 | C1 | S1 | 121.4° | 125.0° |
C5 | C1 | S1 | 126.6° | 125.0° |
C1 | C5 | H2 | 123.8° | 122.4° |
C1 | S1 | N24 | 106.3° | 107.2° |
C1 | S1 | O22 | 107.7° | 106.4° |
C1 | S1 | O23 | 105.8° | 106.4° |
N24 | S1 | O22 | 108.1° | 106.4° |
N24 | S1 | O23 | 107.8° | 106.4° |
S1 | N24 | H4 | 109.5° | 120.0° |
S1 | N24 | H5 | 109.5° | 120.0° |
O22 | S1 | O23 | 120.2° | 123.1° |
H4 | N24 | H5 | 109.5° | 119.9° |
H6 | C6 | H7 | 109.5° | 109.7° |
H8 | C7 | H9 | 109.5° | 109.5° |
H10 | C9 | H11 | 109.5° | 109.5° |
H12 | C10 | H13 | 109.5° | 109.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C9 | C10 | N2 | H12 | 120.1° | 120.0° |
C9 | C10 | N2 | H13 | 120.1° | 119.7° |
C10 | C9 | O8 | H10 | 120.6° | 120.1° |
C10 | C9 | O8 | H11 | 120.6° | 119.9° |
C9 | C10 | N2 | C16 | 105.5° | 129.5° |
C9 | C10 | N2 | C6 | 55.9° | 50.2° |
C10 | C9 | O8 | C7 | 41.9° | 62.5° |
C10 | C9 | H10 | H11 | 118.4° | 120.0° |
C9 | C10 | H12 | H13 | 119.6° | 120.6° |
N2 | C10 | C9 | O8 | 10.4° | 52.1° |
C10 | N2 | C16 | C6 | 160.8° | 179.6° |
C10 | N2 | C16 | O25 | 82.9° | 6.5° |
C10 | N2 | C16 | C14 | 94.6° | 173.4° |
C10 | N2 | C6 | C7 | 45.4° | 50.3° |
C10 | N2 | C6 | H6 | 75.2° | 69.5° |
C10 | N2 | C6 | H7 | 166.0° | 170.0° |
N2 | C10 | C9 | H10 | 110.2° | 172.0° |
N2 | C10 | C9 | H11 | 130.9° | 67.9° |
N2 | C10 | H12 | H13 | 119.6° | 120.1° |
C9 | O8 | C7 | C6 | 52.8° | 62.6° |
C9 | O8 | C7 | H8 | 173.1° | 177.5° |
C9 | O8 | C7 | H9 | 67.4° | 57.3° |
O8 | C9 | H10 | H11 | 118.3° | 120.1° |
O8 | C9 | C10 | H12 | 109.8° | 172.1° |
O8 | C9 | C10 | H13 | 130.5° | 67.4° |
N2 | C16 | O25 | C14 | 177.5° | 180.0° |
C16 | N2 | C6 | C7 | 116.0° | 129.4° |
N2 | C16 | C14 | N13 | 6.4° | 7.8° |
N2 | C16 | C14 | O15 | 178.6° | 172.0° |
C16 | N2 | C6 | H6 | 123.3° | 110.9° |
C16 | N2 | C6 | H7 | 4.6° | 9.7° |
C16 | N2 | C10 | H12 | 134.4° | 9.5° |
C16 | N2 | C10 | H13 | 14.7° | 110.8° |
N2 | C6 | C7 | O8 | 10.3° | 52.3° |
C6 | N2 | C16 | O25 | 116.3° | 173.1° |
C6 | N2 | C16 | C14 | 66.2° | 6.9° |
N2 | C6 | C7 | H6 | 120.7° | 119.7° |
N2 | C6 | C7 | H7 | 120.6° | 119.7° |
N2 | C6 | H6 | H7 | 118.0° | 120.5° |
N2 | C6 | C7 | H8 | 130.6° | 172.2° |
N2 | C6 | C7 | H9 | 109.9° | 67.7° |
C6 | N2 | C10 | H12 | 64.2° | 170.2° |
C6 | N2 | C10 | H13 | 176.1° | 69.5° |
O8 | C7 | C6 | H8 | 120.3° | 119.9° |
O8 | C7 | C6 | H9 | 120.2° | 120.0° |
O8 | C7 | C6 | H6 | 131.0° | 67.4° |
O8 | C7 | C6 | H7 | 110.3° | 172.0° |
O8 | C7 | H8 | H9 | 119.3° | 120.2° |
C7 | O8 | C9 | H10 | 162.5° | 177.5° |
C7 | O8 | C9 | H11 | 78.7° | 57.4° |
O25 | C16 | C14 | N13 | 171.2° | 172.1° |
O25 | C16 | C14 | O15 | 3.9° | 8.0° |
C16 | C14 | N13 | O15 | 175.4° | 179.8° |
C16 | C14 | N13 | C12 | 174.9° | 180.0° |
C16 | C14 | O15 | C11 | 175.0° | 179.8° |
C7 | C6 | H6 | H7 | 117.9° | 120.6° |
C6 | C7 | H8 | H9 | 119.2° | 120.1° |
N13 | C14 | O15 | C11 | 0.7° | 0.4° |
C14 | N13 | C12 | C11 | 0.1° | 0.0° |
C14 | N13 | C12 | H3 | 179.9° | 180.0° |
O15 | C14 | N13 | C12 | 0.5° | 0.2° |
C14 | O15 | C11 | C12 | 0.6° | 0.4° |
C14 | O15 | C11 | C3 | 179.5° | 179.9° |
N13 | C12 | C11 | O15 | 0.3° | 0.3° |
N13 | C12 | C11 | H3 | 180.0° | 180.0° |
N13 | C12 | C11 | C3 | 179.8° | 180.0° |
O15 | C11 | C12 | C3 | 179.9° | 179.7° |
O15 | C11 | C3 | C4 | 158.6° | 0.3° |
O15 | C11 | C3 | S2 | 22.0° | 180.0° |
O15 | C11 | C12 | H3 | 179.7° | 179.7° |
C12 | C11 | C3 | C4 | 21.5° | 180.0° |
C12 | C11 | C3 | S2 | 157.9° | 0.3° |
C11 | C3 | C4 | S2 | 179.4° | 179.7° |
C11 | C3 | C4 | C5 | 179.2° | 180.0° |
C11 | C3 | S2 | C1 | 179.0° | 179.7° |
C11 | C3 | C4 | H1 | 0.8° | 0.2° |
C3 | C11 | C12 | H3 | 0.2° | 0.0° |
C3 | C4 | C5 | H1 | 180.0° | 179.8° |
C4 | C3 | S2 | C1 | 0.4° | 0.0° |
C3 | C4 | C5 | C1 | 0.1° | 0.5° |
C3 | C4 | C5 | H2 | 179.9° | 180.0° |
S2 | C3 | C4 | C5 | 0.3° | 0.2° |
C3 | S2 | C1 | C5 | 0.4° | 0.3° |
C3 | S2 | C1 | S1 | 177.0° | 180.0° |
S2 | C3 | C4 | H1 | 179.7° | 180.0° |
C4 | C5 | C1 | S2 | 0.4° | 0.5° |
C4 | C5 | C1 | H2 | 180.0° | 179.5° |
C4 | C5 | C1 | S1 | 176.9° | 179.8° |
S2 | C1 | C5 | S1 | 177.2° | 179.7° |
S2 | C1 | S1 | N24 | 127.2° | 89.9° |
S2 | C1 | S1 | O22 | 11.5° | 23.6° |
S2 | C1 | S1 | O23 | 118.4° | 156.5° |
S2 | C1 | C5 | H2 | 179.6° | 180.0° |
C5 | C1 | S1 | N24 | 55.8° | 89.7° |
C5 | C1 | S1 | O22 | 171.5° | 156.8° |
C5 | C1 | S1 | O23 | 58.6° | 23.9° |
C1 | C5 | C4 | H1 | 180.0° | 179.7° |
C1 | S1 | N24 | O22 | 115.4° | 113.5° |
C1 | S1 | N24 | O23 | 113.1° | 113.6° |
C1 | S1 | O22 | O23 | 121.2° | 123.0° |
S1 | C1 | C5 | H2 | 3.2° | 0.3° |
C1 | S1 | N24 | H4 | 180.0° | 0.0° |
C1 | S1 | N24 | H5 | 60.0° | 180.0° |
N24 | S1 | O22 | O23 | 124.3° | 122.9° |
S1 | N24 | H4 | H5 | 120.0° | 180.0° |
O22 | S1 | N24 | H4 | 64.6° | 113.6° |
O22 | S1 | N24 | H5 | 55.5° | 66.4° |
O23 | S1 | N24 | H4 | 66.9° | 113.6° |
O23 | S1 | N24 | H5 | 173.1° | 66.5° |
H1 | C4 | C5 | H2 | 0.1° | 0.2° |
H6 | C6 | C7 | H8 | 108.7° | 52.5° |
H6 | C6 | C7 | H9 | 10.7° | 172.6° |
H7 | C6 | C7 | H8 | 9.9° | 68.1° |
H7 | C6 | C7 | H9 | 129.4° | 52.0° |
H10 | C9 | C10 | H12 | 129.7° | 67.9° |
H10 | C9 | C10 | H13 | 10.0° | 52.6° |
H11 | C9 | C10 | H12 | 10.8° | 52.1° |
H11 | C9 | C10 | H13 | 109.0° | 172.7° |