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SummaryGeometryRelated PDB entries

80Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O53C52sing1.43Å1.46Å
C51C52sing1.53Å1.52Å
C51O72sing1.43Å1.48Å
C52C85sing1.53Å1.45Å
O72C73sing1.43Å1.46Å
O75C74sing1.43Å1.41Å
O75P76sing1.61Å1.65Å
O82P76doub1.48Å1.50Å
C85O86sing1.43Å1.46Å
C85C83sing1.53Å1.47Å
C73C83sing1.53Å1.51Å
C73C74sing1.53Å1.51Å
C83O84sing1.43Å1.43Å
O81P76sing1.61Å1.50Å
P76O77sing1.61Å1.64Å
O77C78sing1.43Å1.41Å
C78C79sing1.53Å1.53Å
C79N80sing1.47Å1.46Å
C51H63sing1.09Å1.10Å
C52H64sing1.09Å1.10Å
C73H83sing1.09Å1.10Å
C74H84sing1.09Å1.10Å
C74H85sing1.09Å1.10Å
C78H86sing1.09Å1.10Å
C78H87sing1.09Å1.10Å
C79H88sing1.09Å1.10Å
C79H89sing1.09Å1.10Å
N80H90sing1.01Å1.00Å
N80H91sing1.01Å1.00Å
O81H93sing0.97Å0.95Å
C83H94sing1.09Å1.10Å
O84H95sing0.97Å0.95Å
C85H96sing1.09Å1.10Å
O86H97sing0.97Å0.95Å
O53H2sing0.97Å0.95Å
C51OXTsing1.43Å1.38Å
OXTHXTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O53C52C51105.1°109.5°
O53C52C85106.8°109.6°
O53C52H64110.7°109.6°
C52O53H2109.5°114.0°
C52C51O72112.1°109.4°
C51C52C85113.4°109.1°
C52C51H63108.0°109.4°
C51C52H64109.8°109.5°
C52C51OXT109.3°109.5°
C51O72C73113.1°114.1°
O72C51H63108.6°109.5°
O72C51OXT108.9°109.5°
C52C85O86110.2°109.5°
C52C85C83109.1°109.0°
C85C52H64110.8°109.5°
C52C85H96110.3°109.6°
O72C73C83110.6°109.4°
O72C73C74110.0°109.5°
O72C73H83110.2°109.5°
C74O75P76117.4°123.0°
O75C74C73108.3°109.5°
O75C74H84109.7°109.4°
O75C74H85109.8°109.5°
O75P76O82107.8°109.5°
O75P76O81109.2°109.5°
O75P76O77111.7°109.5°
O82P76O81110.5°109.5°
O82P76O77108.9°109.5°
O86C85C83107.0°109.5°
O86C85H96110.2°109.6°
C85O86H97109.5°114.0°
C85C83C73108.8°109.2°
C85C83O84109.4°109.5°
C85C83H94110.0°109.6°
C83C85H96110.0°109.7°
C83C73C74106.8°109.5°
C73C83O84108.5°109.5°
C83C73H83109.6°109.5°
C73C83H94109.5°109.6°
C74C73H83109.5°109.5°
C73C74H84109.8°109.5°
C73C74H85109.8°109.5°
O84C83H94110.5°109.5°
C83O84H95109.5°114.0°
O81P76O77108.6°109.5°
P76O81H93109.5°114.0°
P76O77C78116.9°123.0°
O77C78C79107.2°109.5°
O77C78H86110.0°109.5°
O77C78H87110.0°109.5°
C78C79N80109.6°109.5°
C79C78H86110.0°109.5°
C79C78H87110.0°109.5°
C78C79H88109.5°109.5°
C78C79H89109.4°109.5°
N80C79H88109.4°109.5°
N80C79H89109.4°109.5°
C79N80H90109.5°111.0°
C79N80H91109.5°111.0°
H63C51OXT109.9°109.5°
H84C74H85109.5°109.5°
H86C78H87109.5°109.4°
H88C79H89109.5°109.5°
H90N80H91109.5°111.0°
C51OXTHXT109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O53C52C51C85116.4°119.9°
O53C52C51H64119.1°120.2°
O53C52C51O7268.7°62.3°
O53C52C85H64120.6°120.2°
O53C52C85O8658.3°56.9°
O53C52C85C8358.9°62.9°
O53C52C51H6350.9°57.7°
O53C52C85H96179.9°177.1°
O53C52C51OXT170.5°177.7°
C52C51O72H63119.2°120.0°
C52C51O72OXT121.1°119.9°
C51C52C85H64124.0°119.9°
C52C51O72C7345.9°61.1°
C51C52C85O86173.6°176.8°
C51C52C85C8356.4°57.0°
C52C51H63OXT119.2°120.0°
C51C52C85H9664.5°63.0°
C51C52O53H2180.0°60.1°
C52C51OXTHXT180.0°180.0°
O72C51C52C8547.7°57.6°
C51O72C73C8353.8°61.1°
C51O72C73C74171.6°178.9°
O72C51H63OXT119.0°120.0°
O72C51C52H64172.3°177.5°
C51O72C73H8367.5°58.8°
O72C51OXTHXT57.3°60.1°
C52C85O86C83118.5°119.5°
C52C85O86H96121.9°120.2°
C52C85C83H96121.1°119.9°
C52C85C83C7362.9°57.1°
C52C85C83O84178.7°176.9°
C85C52C51H63167.3°177.6°
C52C85C83H9457.1°63.0°
C52C85O86H97180.0°60.0°
C85C52O53H259.2°179.7°
C85C52C51OXT73.1°62.3°
O72C73C74O7525.4°65.0°
O72C73C83C8562.1°57.6°
O72C73C83C74119.7°120.0°
O72C73C83H83121.7°120.0°
O72C73C74H83121.2°120.0°
O72C73C83O84178.9°177.5°
C73O72C51H63165.2°178.9°
O72C73C74H8494.4°175.0°
O72C73C74H85145.2°55.0°
O72C73C83H9458.2°62.4°
C73O72C51OXT75.2°58.8°
C74O75P76O82120.9°55.0°
O75C74C73C83145.5°175.1°
O75C74C73H84119.8°119.9°
O75C74C73H85119.8°120.0°
C74O75P76O81119.0°65.0°
C74O75P76O771.2°175.0°
O75C74C73H8395.9°55.0°
O75C74H84H85120.6°120.0°
O75P76O82O81119.3°120.0°
O75P76O82O77121.4°120.0°
P76O75C74C73129.4°180.0°
O75P76O81O77122.1°120.0°
O75P76O77C78136.7°175.0°
P76O75C74H84110.8°60.0°
P76O75C74H859.5°60.0°
O75P76O81H93118.5°59.9°
O82P76O81O77119.4°120.0°
O82P76O77C78104.2°55.0°
O82P76O81H930.0°179.9°
O86C85C83H96119.7°120.2°
O86C85C83C73177.9°176.9°
O86C85C83O8459.5°63.3°
O86C85C52H6462.3°63.3°
O86C85C83H9462.1°56.8°
C85C83C73O84119.0°119.8°
C85C83C73H94120.3°120.1°
C85C83C73C74178.2°177.6°
C85C83O84H94121.3°120.2°
C83C85C52H64179.5°176.9°
C85C83C73H8359.6°62.3°
C85C83O84H95180.0°60.3°
C83C85O86H9761.5°179.5°
C83C73C74H83118.6°120.1°
C73C83O84H94120.1°120.1°
C83C73C74H8425.7°55.1°
C83C73C74H8594.7°64.9°
C73C83O84H9561.3°180.0°
C73C83C85H9658.3°62.9°
C74C73C83O8459.2°62.6°
C73C74H84H85120.6°120.0°
C74C73C83H9461.5°57.5°
O84C83C73H8359.4°57.5°
O84C83C85H9660.2°56.9°
O81P76O77C7816.2°65.0°
P76O77C78C79177.7°180.0°
P76O77C78H8658.0°60.0°
P76O77C78H8762.7°60.0°
O77P76O81H93119.4°60.1°
O77C78C79H86119.6°120.0°
O77C78C79H87119.7°120.0°
O77C78C79N80168.1°65.0°
O77C78H86H87121.0°120.0°
O77C78C79H8871.9°175.0°
O77C78C79H8948.0°55.0°
C78C79N80H88120.0°120.0°
C78C79N80H89120.0°120.0°
C79C78H86H87121.0°120.0°
C78C79H88H89119.9°120.0°
C78C79N80H90180.0°56.1°
C78C79N80H9160.0°180.0°
N80C79C78H8648.4°55.0°
N80C79C78H8772.3°175.0°
N80C79H88H89119.9°120.0°
C79N80H90H91120.0°123.9°
H63C51C52H6468.1°62.5°
H63C51OXTHXT61.6°60.0°
H64C52C85H9659.5°56.9°
H64C52O53H261.5°60.1°
H64C52C51OXT51.4°57.5°
H83C73C74H84144.3°65.0°
H83C73C74H8523.9°175.0°
H83C73C83H94179.9°177.6°
H86C78C79H88168.4°65.0°
H86C78C79H8971.6°175.0°
H87C78C79H8847.7°55.0°
H87C78C79H89167.7°65.0°
H88C79N80H9059.9°63.9°
H88C79N80H91180.0°60.0°
H89C79N80H9060.0°176.1°
H89C79N80H9160.0°60.0°
H94C83O84H9558.7°59.9°
H94C83C85H96178.2°177.1°
H96C85O86H9758.1°60.2°

247947

PDB entries from 2026-01-21

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