7DT
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2B | PB | doub | 1.48Å | 1.52Å | |
| O2A | PA | doub | 1.48Å | 1.49Å | |
| O1A | PA | sing | 1.61Å | 1.50Å | |
| PA | O3A | sing | 1.61Å | 1.58Å | |
| PA | O5' | sing | 1.61Å | 1.57Å | |
| PB | O3A | sing | 1.61Å | 1.62Å | |
| PB | O1B | sing | 1.61Å | 1.54Å | |
| PB | O3B | sing | 1.61Å | 1.53Å | |
| O3B | PG | sing | 1.61Å | 1.63Å | |
| O2G | PG | doub | 1.48Å | 1.50Å | |
| O5' | C5' | sing | 1.43Å | 1.45Å | |
| C20 | C8 | doub | 1.34Å | 1.38Å | Aromatic |
| C20 | C5 | sing | 1.46Å | 1.37Å | Aromatic |
| N6 | C6 | sing | 1.38Å | 1.38Å | |
| C8 | N9 | sing | 1.37Å | 1.35Å | Aromatic |
| PG | O1G | sing | 1.61Å | 1.49Å | |
| PG | O3G | sing | 1.61Å | 1.54Å | |
| C5 | C6 | doub | 1.40Å | 1.41Å | Aromatic |
| C5 | C4 | sing | 1.41Å | 1.38Å | Aromatic |
| C6 | N1 | sing | 1.33Å | 1.30Å | Aromatic |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| O4' | C4' | sing | 1.44Å | 1.43Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| N9 | C4 | sing | 1.37Å | 1.37Å | Aromatic |
| N9 | C1' | sing | 1.47Å | 1.48Å | |
| C4 | N3 | doub | 1.33Å | 1.33Å | Aromatic |
| N1 | C2 | doub | 1.32Å | 1.35Å | Aromatic |
| C4' | C3' | sing | 1.54Å | 1.54Å | |
| C1' | C2' | sing | 1.55Å | 1.56Å | |
| N3 | C2 | sing | 1.32Å | 1.36Å | Aromatic |
| C2' | C3' | sing | 1.54Å | 1.56Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.37Å | |
| O3G | H1 | sing | 0.97Å | 0.95Å | |
| O1G | H2 | sing | 0.97Å | 0.95Å | |
| O1B | H3 | sing | 0.97Å | 0.95Å | |
| O1A | H4 | sing | 0.97Å | 0.95Å | |
| C5' | H5 | sing | 1.09Å | 1.10Å | |
| C5' | H6 | sing | 1.09Å | 1.10Å | |
| C4' | H7 | sing | 1.09Å | 1.10Å | |
| C1' | H8 | sing | 1.09Å | 1.10Å | |
| C8 | H9 | sing | 1.08Å | 1.08Å | |
| C20 | H10 | sing | 1.08Å | 1.08Å | |
| N6 | H11 | sing | 0.97Å | 1.00Å | |
| N6 | H12 | sing | 0.97Å | 1.00Å | |
| C2 | H13 | sing | 1.08Å | 1.08Å | |
| C2' | H14 | sing | 1.09Å | 1.10Å | |
| O2' | H15 | sing | 0.97Å | 0.95Å | |
| C3' | H16 | sing | 1.09Å | 1.10Å | |
| O3' | H17 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2B | PB | O3A | 106.9° | 109.5° |
| O2B | PB | O1B | 117.1° | 109.5° |
| O2B | PB | O3B | 114.4° | 109.5° |
| O2A | PA | O1A | 115.1° | 109.5° |
| O2A | PA | O3A | 112.4° | 109.5° |
| O2A | PA | O5' | 108.4° | 109.4° |
| O1A | PA | O3A | 108.9° | 109.5° |
| O1A | PA | O5' | 109.1° | 109.5° |
| PA | O1A | H4 | 109.5° | 114.0° |
| O3A | PA | O5' | 102.2° | 109.4° |
| PA | O3A | PB | 132.6° | 134.0° |
| PA | O5' | C5' | 122.8° | 123.0° |
| O3A | PB | O1B | 104.0° | 109.5° |
| O3A | PB | O3B | 100.2° | 109.5° |
| O1B | PB | O3B | 112.0° | 109.5° |
| PB | O1B | H3 | 109.5° | 114.0° |
| PB | O3B | PG | 125.6° | 134.0° |
| O3B | PG | O2G | 104.6° | 109.4° |
| O3B | PG | O1G | 103.0° | 109.5° |
| O3B | PG | O3G | 104.3° | 109.5° |
| O2G | PG | O1G | 118.2° | 109.5° |
| O2G | PG | O3G | 110.2° | 109.5° |
| O5' | C5' | C4' | 110.1° | 109.5° |
| O5' | C5' | H5 | 109.3° | 109.4° |
| O5' | C5' | H6 | 109.3° | 109.5° |
| C8 | C20 | C5 | 108.8° | 106.8° |
| C20 | C8 | N9 | 108.2° | 109.8° |
| C20 | C8 | H9 | 125.9° | 125.1° |
| C8 | C20 | H10 | 125.6° | 126.6° |
| C20 | C5 | C6 | 133.3° | 135.1° |
| C20 | C5 | C4 | 106.3° | 106.2° |
| C5 | C20 | H10 | 125.6° | 126.6° |
| N6 | C6 | C5 | 119.9° | 120.8° |
| N6 | C6 | N1 | 121.9° | 120.8° |
| C6 | N6 | H11 | 109.5° | 120.0° |
| C6 | N6 | H12 | 109.5° | 120.0° |
| C8 | N9 | C4 | 107.6° | 110.1° |
| C8 | N9 | C1' | 128.7° | 125.0° |
| N9 | C8 | H9 | 125.9° | 125.1° |
| O1G | PG | O3G | 114.7° | 109.5° |
| PG | O1G | H2 | 109.5° | 114.0° |
| PG | O3G | H1 | 109.5° | 114.0° |
| C6 | C5 | C4 | 120.4° | 118.6° |
| C5 | C6 | N1 | 118.1° | 118.3° |
| C5 | C4 | N9 | 109.1° | 107.1° |
| C5 | C4 | N3 | 118.1° | 118.6° |
| C6 | N1 | C2 | 122.7° | 121.0° |
| C5' | C4' | O4' | 104.3° | 110.4° |
| C5' | C4' | C3' | 110.0° | 110.4° |
| C4' | C5' | H5 | 109.3° | 109.5° |
| C4' | C5' | H6 | 109.3° | 109.5° |
| C5' | C4' | H7 | 111.2° | 110.3° |
| C4' | O4' | C1' | 106.4° | 105.3° |
| O4' | C4' | C3' | 107.7° | 104.8° |
| O4' | C4' | H7 | 112.5° | 110.4° |
| O4' | C1' | N9 | 111.8° | 110.4° |
| O4' | C1' | C2' | 104.5° | 104.8° |
| O4' | C1' | H8 | 111.8° | 110.4° |
| C4 | N9 | C1' | 123.7° | 125.0° |
| N9 | C4 | N3 | 132.7° | 134.3° |
| N9 | C1' | C2' | 108.4° | 110.4° |
| N9 | C1' | H8 | 110.7° | 110.4° |
| C4 | N3 | C2 | 121.7° | 120.7° |
| N1 | C2 | N3 | 119.0° | 122.7° |
| N1 | C2 | H13 | 120.5° | 118.6° |
| C4' | C3' | C2' | 103.2° | 104.1° |
| C4' | C3' | O3' | 107.6° | 110.5° |
| C3' | C4' | H7 | 110.8° | 110.4° |
| C4' | C3' | H16 | 110.5° | 110.5° |
| C1' | C2' | C3' | 97.5° | 104.0° |
| C1' | C2' | O2' | 113.4° | 110.5° |
| C2' | C1' | H8 | 109.5° | 110.4° |
| C1' | C2' | H14 | 111.3° | 110.5° |
| N3 | C2 | H13 | 120.5° | 118.7° |
| C3' | C2' | O2' | 108.5° | 110.6° |
| C2' | C3' | O3' | 111.5° | 110.5° |
| C3' | C2' | H14 | 111.3° | 110.5° |
| C2' | C3' | H16 | 110.3° | 110.5° |
| O2' | C2' | H14 | 113.7° | 110.6° |
| C2' | O2' | H15 | 109.5° | 114.0° |
| O3' | C3' | H16 | 113.2° | 110.5° |
| C3' | O3' | H17 | 109.5° | 114.0° |
| H5 | C5' | H6 | 109.5° | 109.4° |
| H11 | N6 | H12 | 109.4° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2B | PB | O3A | PA | 30.7° | 45.0° |
| O2B | PB | O3A | O1B | 124.5° | 120.0° |
| O2B | PB | O3A | O3B | 119.5° | 120.0° |
| O2B | PB | O1B | O3B | 135.0° | 120.0° |
| O2B | PB | O3B | PG | 116.4° | 39.9° |
| O2B | PB | O1B | H3 | 0.0° | 180.0° |
| O2A | PA | O1A | O3A | 127.2° | 120.1° |
| O2A | PA | O1A | O5' | 122.1° | 120.0° |
| O2A | PA | O3A | O5' | 116.0° | 119.9° |
| O2A | PA | O3A | PB | 18.1° | 40.0° |
| O2A | PA | O5' | C5' | 178.3° | 55.0° |
| O2A | PA | O1A | H4 | 0.0° | 180.0° |
| O1A | PA | O3A | O5' | 115.3° | 120.0° |
| O1A | PA | O3A | PB | 110.5° | 80.0° |
| O1A | PA | O5' | C5' | 52.3° | 64.9° |
| PA | O3A | PB | O1B | 155.2° | 75.0° |
| PA | O3A | PB | O3B | 88.9° | 165.0° |
| O3A | PA | O5' | C5' | 62.8° | 175.0° |
| O3A | PA | O1A | H4 | 127.1° | 59.9° |
| O5' | PA | O3A | PB | 134.1° | 160.0° |
| PA | O5' | C5' | C4' | 175.7° | 180.0° |
| O5' | PA | O1A | H4 | 122.1° | 60.1° |
| PA | O5' | C5' | H5 | 55.6° | 60.0° |
| PA | O5' | C5' | H6 | 64.2° | 59.9° |
| O3A | PB | O1B | O3B | 107.3° | 120.0° |
| O3A | PB | O3B | PG | 129.6° | 159.9° |
| O3A | PB | O1B | H3 | 117.7° | 60.0° |
| O1B | PB | O3B | PG | 19.9° | 80.1° |
| PB | O3B | PG | O2G | 47.5° | 40.1° |
| PB | O3B | PG | O1G | 171.6° | 160.0° |
| PB | O3B | PG | O3G | 68.3° | 79.9° |
| O3B | PB | O1B | H3 | 135.0° | 60.0° |
| O3B | PG | O2G | O1G | 113.8° | 119.9° |
| O3B | PG | O2G | O3G | 111.6° | 120.1° |
| O3B | PG | O1G | O3G | 112.7° | 120.1° |
| O3B | PG | O3G | H1 | 111.8° | 60.0° |
| O3B | PG | O1G | H2 | 114.7° | 180.0° |
| O2G | PG | O1G | O3G | 132.6° | 120.0° |
| O2G | PG | O3G | H1 | 0.0° | 180.0° |
| O2G | PG | O1G | H2 | 0.0° | 60.0° |
| O5' | C5' | C4' | H5 | 120.1° | 120.0° |
| O5' | C5' | C4' | H6 | 120.1° | 120.1° |
| O5' | C5' | C4' | O4' | 63.6° | 69.5° |
| O5' | C5' | C4' | C3' | 178.9° | 175.0° |
| O5' | C5' | H5 | H6 | 119.7° | 120.0° |
| O5' | C5' | C4' | H7 | 57.9° | 52.8° |
| C8 | C20 | C5 | H10 | 180.0° | 180.0° |
| C20 | C8 | N9 | H9 | 180.0° | 180.0° |
| C8 | C20 | C5 | C6 | 179.9° | 179.9° |
| C8 | C20 | C5 | C4 | 0.7° | 0.0° |
| C20 | C8 | N9 | C4 | 1.8° | 0.0° |
| C20 | C8 | N9 | C1' | 179.6° | 179.7° |
| C20 | C5 | C6 | N6 | 0.4° | 0.1° |
| C5 | C20 | C8 | N9 | 1.5° | 0.0° |
| C20 | C5 | C6 | C4 | 179.2° | 179.9° |
| C20 | C5 | C6 | N1 | 179.4° | 180.0° |
| C20 | C5 | C4 | N9 | 0.4° | 0.0° |
| C20 | C5 | C4 | N3 | 179.7° | 179.9° |
| C5 | C20 | C8 | H9 | 178.5° | 180.0° |
| N6 | C6 | C5 | N1 | 179.7° | 180.0° |
| N6 | C6 | C5 | C4 | 179.6° | 180.0° |
| N6 | C6 | N1 | C2 | 179.8° | 180.0° |
| C6 | N6 | H11 | H12 | 120.0° | 180.0° |
| C8 | N9 | C4 | C5 | 1.4° | 0.0° |
| C8 | N9 | C1' | O4' | 54.0° | 23.8° |
| C8 | N9 | C4 | C1' | 178.7° | 179.8° |
| C8 | N9 | C4 | N3 | 178.8° | 179.9° |
| C8 | N9 | C1' | C2' | 60.6° | 91.6° |
| C8 | N9 | C1' | H8 | 179.3° | 146.1° |
| N9 | C8 | C20 | H10 | 178.4° | 180.0° |
| O1G | PG | O3G | H1 | 136.3° | 60.1° |
| O3G | PG | O1G | H2 | 132.6° | 60.0° |
| C6 | C5 | C4 | N9 | 179.0° | 180.0° |
| C6 | C5 | C4 | N3 | 0.9° | 0.0° |
| C5 | C6 | N1 | C2 | 0.5° | 0.0° |
| C6 | C5 | C20 | H10 | 0.0° | 0.0° |
| C5 | C6 | N6 | H11 | 179.7° | 0.0° |
| C5 | C6 | N6 | H12 | 60.3° | 180.0° |
| C4 | C5 | C6 | N1 | 0.2° | 0.0° |
| C5 | C4 | N9 | N3 | 179.9° | 180.0° |
| C5 | C4 | N9 | C1' | 179.9° | 179.7° |
| C5 | C4 | N3 | C2 | 1.0° | 0.1° |
| C4 | C5 | C20 | H10 | 179.3° | 180.0° |
| C6 | N1 | C2 | N3 | 0.4° | 0.0° |
| N1 | C6 | N6 | H11 | 0.0° | 180.0° |
| N1 | C6 | N6 | H12 | 120.0° | 0.0° |
| C6 | N1 | C2 | H13 | 179.6° | 180.0° |
| C5' | C4' | O4' | C3' | 116.9° | 118.9° |
| C5' | C4' | O4' | H7 | 120.7° | 122.2° |
| C5' | C4' | O4' | C1' | 135.9° | 159.4° |
| C5' | C4' | C3' | H7 | 123.4° | 122.2° |
| C5' | C4' | C3' | C2' | 102.8° | 142.8° |
| C5' | C4' | C3' | O3' | 139.2° | 98.5° |
| C4' | C5' | H5 | H6 | 119.7° | 120.0° |
| C5' | C4' | C3' | H16 | 15.1° | 24.2° |
| C4' | O4' | C1' | N9 | 158.0° | 159.3° |
| O4' | C4' | C3' | H7 | 123.5° | 118.9° |
| C4' | O4' | C1' | C2' | 41.0° | 40.5° |
| O4' | C4' | C3' | C2' | 10.3° | 24.0° |
| O4' | C4' | C3' | O3' | 107.7° | 142.6° |
| O4' | C4' | C5' | H5 | 56.5° | 50.4° |
| O4' | C4' | C5' | H6 | 176.3° | 170.4° |
| C4' | O4' | C1' | H8 | 77.3° | 78.3° |
| O4' | C4' | C3' | H16 | 128.2° | 94.7° |
| O4' | C1' | N9 | C4 | 124.4° | 156.5° |
| O4' | C1' | N9 | C2' | 114.6° | 115.4° |
| O4' | C1' | N9 | H8 | 125.3° | 122.3° |
| C1' | O4' | C4' | C3' | 19.0° | 40.5° |
| O4' | C1' | C2' | H8 | 119.8° | 118.8° |
| O4' | C1' | C2' | C3' | 45.0° | 24.0° |
| O4' | C1' | C2' | O2' | 158.9° | 142.6° |
| C1' | O4' | C4' | H7 | 103.5° | 78.4° |
| O4' | C1' | C2' | H14 | 71.4° | 94.7° |
| C4 | N9 | C1' | C2' | 121.0° | 88.2° |
| N9 | C4 | N3 | C2 | 178.8° | 180.0° |
| C4 | N9 | C1' | H8 | 0.9° | 34.1° |
| C4 | N9 | C8 | H9 | 178.2° | 180.0° |
| C1' | N9 | C4 | N3 | 0.1° | 0.3° |
| N9 | C1' | C2' | H8 | 120.8° | 122.3° |
| N9 | C1' | C2' | C3' | 164.3° | 142.8° |
| N9 | C1' | C2' | O2' | 81.8° | 98.5° |
| C1' | N9 | C8 | H9 | 0.4° | 0.2° |
| N9 | C1' | C2' | H14 | 47.9° | 24.2° |
| C4 | N3 | C2 | N1 | 0.4° | 0.1° |
| C4 | N3 | C2 | H13 | 179.6° | 180.0° |
| N1 | C2 | N3 | H13 | 180.0° | 180.0° |
| C4' | C3' | C2' | C1' | 31.7° | 0.0° |
| C4' | C3' | C2' | O3' | 115.3° | 118.7° |
| C4' | C3' | C2' | H16 | 118.1° | 118.7° |
| C4' | C3' | C2' | O2' | 149.5° | 118.6° |
| C4' | C3' | O3' | H16 | 122.4° | 122.7° |
| C3' | C4' | C5' | H5 | 58.8° | 65.0° |
| C3' | C4' | C5' | H6 | 61.0° | 55.0° |
| C4' | C3' | C2' | H14 | 84.6° | 118.6° |
| C4' | C3' | O3' | H17 | 180.0° | 180.0° |
| C1' | C2' | C3' | O2' | 117.8° | 118.6° |
| C1' | C2' | C3' | H14 | 116.4° | 118.6° |
| C1' | C2' | O2' | H14 | 128.4° | 122.6° |
| C1' | C2' | C3' | O3' | 83.6° | 118.7° |
| C1' | C2' | O2' | H15 | 180.0° | 180.0° |
| C1' | C2' | C3' | H16 | 149.8° | 118.7° |
| C3' | C2' | O2' | H14 | 124.4° | 122.8° |
| C2' | C3' | O3' | H16 | 125.0° | 122.6° |
| C2' | C3' | C4' | H7 | 133.8° | 94.9° |
| C3' | C2' | C1' | H8 | 74.8° | 94.9° |
| C3' | C2' | O2' | H15 | 72.8° | 65.4° |
| C2' | C3' | O3' | H17 | 67.4° | 65.3° |
| O2' | C2' | C3' | O3' | 34.3° | 0.1° |
| O2' | C2' | C1' | H8 | 39.1° | 23.8° |
| O2' | C2' | C3' | H16 | 92.4° | 122.7° |
| O3' | C3' | C4' | H7 | 15.8° | 23.7° |
| O3' | C3' | C2' | H14 | 160.1° | 122.7° |
| H5 | C5' | C4' | H7 | 178.0° | 172.8° |
| H6 | C5' | C4' | H7 | 62.2° | 67.3° |
| H7 | C4' | C3' | H16 | 108.3° | 146.4° |
| H8 | C1' | C2' | H14 | 168.8° | 146.5° |
| H9 | C8 | C20 | H10 | 1.5° | 0.1° |
| H14 | C2' | O2' | H15 | 51.6° | 57.4° |
| H14 | C2' | C3' | H16 | 33.4° | 0.1° |
| H16 | C3' | O3' | H17 | 57.6° | 57.4° |
