6YQ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C13 | N14 | sing | 1.47Å | 1.50Å | |
C13 | C11 | sing | 1.51Å | 1.47Å | |
C3 | C2 | doub | 1.38Å | 1.42Å | Aromatic |
C3 | C4 | sing | 1.40Å | 1.40Å | Aromatic |
C16 | N14 | sing | 1.36Å | 1.38Å | Aromatic |
C16 | N17 | doub | 1.30Å | 1.37Å | Aromatic |
N14 | C18 | sing | 1.38Å | 1.36Å | Aromatic |
C2 | C1 | sing | 1.38Å | 1.41Å | Aromatic |
N10 | S7 | sing | 1.66Å | 1.64Å | |
N17 | C19 | sing | 1.36Å | 1.37Å | Aromatic |
C18 | C19 | doub | 1.40Å | 1.38Å | Aromatic |
C18 | C20 | sing | 1.39Å | 1.39Å | Aromatic |
C19 | C23 | sing | 1.40Å | 1.38Å | Aromatic |
C20 | C21 | doub | 1.38Å | 1.43Å | Aromatic |
C11 | C4 | sing | 1.47Å | 1.50Å | |
C11 | O12 | doub | 1.21Å | 1.26Å | |
C4 | C5 | doub | 1.40Å | 1.35Å | Aromatic |
C23 | C22 | doub | 1.37Å | 1.40Å | Aromatic |
C21 | C22 | sing | 1.39Å | 1.43Å | Aromatic |
C1 | S7 | sing | 1.76Å | 1.83Å | |
C1 | C6 | doub | 1.39Å | 1.44Å | Aromatic |
S7 | O8 | doub | 1.42Å | 1.49Å | |
S7 | O9 | doub | 1.42Å | 1.45Å | |
C5 | C6 | sing | 1.38Å | 1.34Å | Aromatic |
C6 | CL1 | sing | 1.74Å | 1.72Å | |
N10 | H1 | sing | 0.97Å | 1.00Å | |
N10 | H2 | sing | 0.97Å | 1.00Å | |
C5 | H3 | sing | 1.08Å | 1.08Å | |
C3 | H4 | sing | 1.08Å | 1.08Å | |
C2 | H5 | sing | 1.08Å | 1.08Å | |
C13 | H6 | sing | 1.09Å | 1.10Å | |
C13 | H7 | sing | 1.09Å | 1.10Å | |
C20 | H8 | sing | 1.08Å | 1.08Å | |
C21 | H9 | sing | 1.08Å | 1.08Å | |
C22 | H10 | sing | 1.08Å | 1.08Å | |
C23 | H11 | sing | 1.08Å | 1.08Å | |
C16 | H12 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N14 | C13 | C11 | 106.3° | 109.5° |
C13 | N14 | C16 | 124.9° | 126.4° |
C13 | N14 | C18 | 129.4° | 126.3° |
N14 | C13 | H6 | 110.2° | 109.5° |
N14 | C13 | H7 | 110.3° | 109.4° |
C13 | C11 | C4 | 116.7° | 120.0° |
C13 | C11 | O12 | 124.2° | 120.0° |
C11 | C13 | H6 | 110.3° | 109.5° |
C11 | C13 | H7 | 110.2° | 109.5° |
C2 | C3 | C4 | 120.3° | 119.8° |
C3 | C2 | C1 | 118.5° | 120.2° |
C2 | C3 | H4 | 119.8° | 120.1° |
C3 | C2 | H5 | 120.7° | 119.9° |
C3 | C4 | C11 | 123.0° | 120.2° |
C3 | C4 | C5 | 119.2° | 119.6° |
C4 | C3 | H4 | 119.8° | 120.0° |
N14 | C16 | N17 | 111.8° | 110.1° |
C16 | N14 | C18 | 105.6° | 107.3° |
N14 | C16 | H12 | 124.1° | 125.0° |
C16 | N17 | C19 | 103.9° | 109.6° |
N17 | C16 | H12 | 124.1° | 124.9° |
N14 | C18 | C19 | 108.2° | 106.0° |
N14 | C18 | C20 | 130.7° | 134.1° |
C2 | C1 | S7 | 121.4° | 119.8° |
C2 | C1 | C6 | 118.5° | 120.4° |
C1 | C2 | H5 | 120.7° | 119.9° |
N10 | S7 | C1 | 108.4° | 107.2° |
N10 | S7 | O8 | 108.2° | 106.4° |
N10 | S7 | O9 | 111.0° | 106.4° |
S7 | N10 | H1 | 109.5° | 119.9° |
S7 | N10 | H2 | 109.5° | 120.0° |
N17 | C19 | C18 | 110.5° | 107.0° |
N17 | C19 | C23 | 128.2° | 133.6° |
C19 | C18 | C20 | 121.1° | 119.8° |
C18 | C19 | C23 | 121.3° | 119.5° |
C18 | C20 | C21 | 118.1° | 119.6° |
C18 | C20 | H8 | 120.9° | 120.2° |
C19 | C23 | C22 | 120.6° | 119.9° |
C19 | C23 | H11 | 119.7° | 120.0° |
C20 | C21 | C22 | 120.4° | 120.5° |
C21 | C20 | H8 | 120.9° | 120.2° |
C20 | C21 | H9 | 119.8° | 119.7° |
C4 | C11 | O12 | 118.5° | 120.0° |
C11 | C4 | C5 | 117.8° | 120.2° |
C4 | C5 | C6 | 123.9° | 119.8° |
C4 | C5 | H3 | 118.1° | 120.0° |
C23 | C22 | C21 | 118.3° | 120.6° |
C23 | C22 | H10 | 120.8° | 119.7° |
C22 | C23 | H11 | 119.7° | 120.1° |
C22 | C21 | H9 | 119.7° | 119.8° |
C21 | C22 | H10 | 120.9° | 119.7° |
S7 | C1 | C6 | 119.9° | 119.8° |
C1 | S7 | O8 | 103.9° | 106.4° |
C1 | S7 | O9 | 107.4° | 106.4° |
C1 | C6 | C5 | 119.4° | 120.1° |
C1 | C6 | CL1 | 121.7° | 120.0° |
O8 | S7 | O9 | 117.5° | 123.1° |
C5 | C6 | CL1 | 118.8° | 119.9° |
C6 | C5 | H3 | 118.0° | 120.1° |
H1 | N10 | H2 | 109.4° | 120.1° |
H6 | C13 | H7 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N14 | C13 | C11 | H6 | 119.5° | 120.1° |
N14 | C13 | C11 | H7 | 119.5° | 120.0° |
C13 | N14 | C16 | C18 | 176.9° | 179.8° |
C13 | N14 | C16 | N17 | 178.6° | 179.8° |
C13 | N14 | C18 | C19 | 178.8° | 180.0° |
C13 | N14 | C18 | C20 | 0.3° | 0.0° |
N14 | C13 | C11 | C4 | 168.1° | 180.0° |
N14 | C13 | C11 | O12 | 2.8° | 0.0° |
N14 | C13 | H6 | H7 | 121.5° | 119.9° |
C13 | N14 | C16 | H12 | 1.5° | 0.0° |
C13 | C11 | C4 | C3 | 2.5° | 0.0° |
C11 | C13 | N14 | C16 | 78.6° | 95.3° |
C11 | C13 | N14 | C18 | 97.5° | 85.0° |
C13 | C11 | C4 | O12 | 171.5° | 180.0° |
C13 | C11 | C4 | C5 | 178.0° | 180.0° |
C11 | C13 | H6 | H7 | 121.5° | 120.0° |
C2 | C3 | C4 | H4 | 180.0° | 179.7° |
C3 | C2 | C1 | H5 | 180.0° | 179.7° |
C2 | C3 | C4 | C11 | 177.3° | 179.7° |
C2 | C3 | C4 | C5 | 3.1° | 0.3° |
C3 | C2 | C1 | S7 | 177.3° | 180.0° |
C3 | C2 | C1 | C6 | 0.5° | 0.0° |
C4 | C3 | C2 | C1 | 1.1° | 0.3° |
C3 | C4 | C11 | C5 | 179.5° | 180.0° |
C3 | C4 | C11 | O12 | 174.0° | 180.0° |
C3 | C4 | C5 | C6 | 3.6° | 0.0° |
C3 | C4 | C5 | H3 | 176.4° | 180.0° |
C4 | C3 | C2 | H5 | 178.9° | 180.0° |
N14 | C16 | N17 | H12 | 180.0° | 179.8° |
N14 | C16 | N17 | C19 | 0.5° | 0.4° |
C16 | N14 | C18 | C19 | 2.1° | 0.3° |
C16 | N14 | C18 | C20 | 177.0° | 179.8° |
C16 | N14 | C13 | H6 | 40.9° | 144.7° |
C16 | N14 | C13 | H7 | 161.9° | 24.8° |
N17 | C16 | N14 | C18 | 1.7° | 0.4° |
C16 | N17 | C19 | C18 | 0.9° | 0.2° |
C16 | N17 | C19 | C23 | 177.5° | 179.7° |
N14 | C18 | C19 | N17 | 2.0° | 0.0° |
N14 | C18 | C19 | C20 | 179.3° | 179.9° |
N14 | C18 | C19 | C23 | 176.5° | 180.0° |
N14 | C18 | C20 | C21 | 175.7° | 180.0° |
C18 | N14 | C13 | H6 | 142.9° | 35.1° |
C18 | N14 | C13 | H7 | 21.9° | 155.0° |
N14 | C18 | C20 | H8 | 4.3° | 0.0° |
C18 | N14 | C16 | H12 | 178.4° | 179.7° |
C2 | C1 | S7 | N10 | 0.2° | 115.0° |
C2 | C1 | S7 | C6 | 176.7° | 180.0° |
C2 | C1 | S7 | O8 | 114.6° | 131.5° |
C2 | C1 | S7 | O9 | 120.3° | 1.5° |
C2 | C1 | C6 | C5 | 0.2° | 0.2° |
C2 | C1 | C6 | CL1 | 176.6° | 180.0° |
C1 | C2 | C3 | H4 | 178.8° | 180.0° |
N10 | S7 | C1 | O8 | 114.9° | 113.5° |
N10 | S7 | C1 | O9 | 120.0° | 113.6° |
N10 | S7 | C1 | C6 | 177.0° | 65.0° |
N10 | S7 | O8 | O9 | 126.5° | 122.9° |
S7 | N10 | H1 | H2 | 120.0° | 180.0° |
N17 | C19 | C18 | C23 | 178.5° | 180.0° |
N17 | C19 | C18 | C20 | 177.3° | 180.0° |
N17 | C19 | C23 | C22 | 179.6° | 180.0° |
N17 | C19 | C23 | H11 | 0.4° | 0.1° |
C19 | N17 | C16 | H12 | 179.5° | 179.7° |
C19 | C18 | C20 | C21 | 5.2° | 0.0° |
C18 | C19 | C23 | C22 | 1.4° | 0.0° |
C19 | C18 | C20 | H8 | 174.8° | 180.0° |
C18 | C19 | C23 | H11 | 178.6° | 179.9° |
C20 | C18 | C19 | C23 | 4.2° | 0.0° |
C18 | C20 | C21 | H8 | 180.0° | 180.0° |
C18 | C20 | C21 | C22 | 3.5° | 0.0° |
C18 | C20 | C21 | H9 | 176.5° | 180.0° |
C19 | C23 | C22 | H11 | 180.0° | 179.9° |
C19 | C23 | C22 | C21 | 0.3° | 0.0° |
C19 | C23 | C22 | H10 | 179.8° | 179.9° |
C20 | C21 | C22 | C23 | 0.9° | 0.0° |
C20 | C21 | C22 | H9 | 180.0° | 180.0° |
C20 | C21 | C22 | H10 | 179.1° | 179.9° |
C11 | C4 | C5 | C6 | 176.8° | 180.0° |
C11 | C4 | C5 | H3 | 3.2° | 0.0° |
C11 | C4 | C3 | H4 | 2.7° | 0.0° |
C4 | C11 | C13 | H6 | 72.4° | 60.0° |
C4 | C11 | C13 | H7 | 48.6° | 60.0° |
O12 | C11 | C4 | C5 | 6.5° | 0.0° |
O12 | C11 | C13 | H6 | 116.6° | 120.1° |
O12 | C11 | C13 | H7 | 122.3° | 120.0° |
C4 | C5 | C6 | C1 | 1.9° | 0.2° |
C4 | C5 | C6 | H3 | 180.0° | 179.9° |
C4 | C5 | C6 | CL1 | 174.6° | 180.0° |
C5 | C4 | C3 | H4 | 176.8° | 180.0° |
C23 | C22 | C21 | H10 | 180.0° | 180.0° |
C23 | C22 | C21 | H9 | 179.2° | 180.0° |
C22 | C21 | C20 | H8 | 176.4° | 180.0° |
C21 | C22 | C23 | H11 | 179.8° | 179.9° |
C1 | S7 | O8 | O9 | 118.4° | 123.0° |
S7 | C1 | C6 | C5 | 177.0° | 179.8° |
S7 | C1 | C6 | CL1 | 6.5° | 0.0° |
C1 | S7 | N10 | H1 | 180.0° | 0.0° |
C1 | S7 | N10 | H2 | 60.0° | 180.0° |
S7 | C1 | C2 | H5 | 2.7° | 0.2° |
C6 | C1 | S7 | O8 | 62.1° | 48.5° |
C6 | C1 | S7 | O9 | 63.0° | 178.6° |
C1 | C6 | C5 | CL1 | 176.6° | 179.8° |
C1 | C6 | C5 | H3 | 178.1° | 179.7° |
C6 | C1 | C2 | H5 | 179.5° | 179.8° |
O8 | S7 | N10 | H1 | 68.0° | 113.5° |
O8 | S7 | N10 | H2 | 52.0° | 66.5° |
O9 | S7 | N10 | H1 | 62.2° | 113.6° |
O9 | S7 | N10 | H2 | 177.7° | 66.4° |
CL1 | C6 | C5 | H3 | 5.4° | 0.1° |
H4 | C3 | C2 | H5 | 1.2° | 0.3° |
H8 | C20 | C21 | H9 | 3.5° | 0.1° |
H9 | C21 | C22 | H10 | 0.9° | 0.1° |
H10 | C22 | C23 | H11 | 0.2° | 0.0° |