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Summary Geometry Related PDB entries

6EV

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C01	S02	sing	1.81Å	1.75Å
O22	C21	doub	1.22Å	1.22Å
S02	C03	sing	1.76Å	1.76Å
C10	C09	doub	1.35Å	1.40Å
C21	C09	sing	1.48Å	1.48Å
C21	C23	sing	1.43Å	1.49Å
C09	C08	sing	1.47Å	1.49Å
C03	C23	doub	1.39Å	1.42Å	Aromatic
C03	S04	sing	1.75Å	1.72Å	Aromatic
C23	C06	sing	1.46Å	1.38Å	Aromatic
C08	C07	doub	1.34Å	1.56Å
S04	C05	sing	1.75Å	1.72Å	Aromatic
C06	C07	sing	1.48Å	1.56Å
C06	C05	doub	1.36Å	1.42Å	Aromatic
C10	H1	sing	1.08Å	1.08Å
C10	H2	sing	1.08Å	1.08Å
C01	H4	sing	1.09Å	1.10Å
C01	H5	sing	1.09Å	1.10Å
C01	H6	sing	1.09Å	1.10Å
C05	H7	sing	1.08Å	1.08Å
C07	H8	sing	1.08Å	1.08Å
C08	H9	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C01	S02	C03	110.1°	100.0°
S02	C01	H4	109.5°	109.5°
S02	C01	H5	109.5°	109.5°
S02	C01	H6	109.5°	109.5°
O22	C21	C09	119.5°	120.3°
O22	C21	C23	121.8°	120.3°
S02	C03	C23	128.7°	124.8°
S02	C03	S04	125.8°	124.7°
C10	C09	C21	119.3°	120.2°
C10	C09	C08	122.3°	120.2°
C09	C10	H1	120.0°	120.0°
C09	C10	H2	120.0°	120.0°
C09	C21	C23	118.7°	119.4°
C21	C09	C08	118.4°	119.6°
C21	C23	C03	124.7°	128.1°
C21	C23	C06	119.1°	119.2°
C09	C08	C07	115.1°	120.8°
C09	C08	H9	122.5°	119.6°
C23	C03	S04	105.5°	110.5°
C03	C23	C06	116.2°	112.7°
C03	S04	C05	97.4°	92.2°
C23	C06	C07	122.1°	119.4°
C23	C06	C05	114.2°	112.9°
C08	C07	C06	117.5°	121.6°
C08	C07	H8	121.3°	119.2°
C07	C08	H9	122.4°	119.6°
S04	C05	C06	106.7°	111.7°
S04	C05	H7	126.6°	124.2°
C07	C06	C05	123.7°	127.6°
C06	C07	H8	121.3°	119.2°
C06	C05	H7	126.7°	124.1°
H1	C10	H2	120.0°	120.0°
H4	C01	H5	109.5°	109.5°
H4	C01	H6	109.5°	109.5°
H5	C01	H6	109.4°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C01	S02	C03	C23	64.2°	180.0°
C01	S02	C03	S04	115.8°	0.3°
S02	C01	H4	H5	120.0°	120.0°
S02	C01	H4	H6	120.0°	120.0°
S02	C01	H5	H6	120.0°	120.0°
O22	C21	C09	C10	37.0°	0.1°
O22	C21	C09	C23	179.5°	179.7°
O22	C21	C09	C08	143.1°	180.0°
O22	C21	C23	C03	22.7°	0.8°
O22	C21	C23	C06	157.8°	179.7°
S02	C03	C23	C21	0.2°	0.8°
S02	C03	C23	S04	180.0°	179.7°
S02	C03	C23	C06	179.7°	179.8°
S02	C03	S04	C05	180.0°	180.0°
C03	S02	C01	H4	180.0°	60.0°
C03	S02	C01	H5	60.0°	180.0°
C03	S02	C01	H6	60.0°	60.0°
C10	C09	C21	C08	179.9°	180.0°
C10	C09	C21	C23	142.5°	179.7°
C10	C09	C08	C07	152.7°	180.0°
C09	C10	H1	H2	180.0°	179.7°
C10	C09	C08	H9	27.3°	0.0°
C09	C21	C23	C03	156.7°	179.6°
C09	C21	C23	C06	22.7°	0.6°
C21	C09	C08	C07	27.2°	0.1°
C21	C09	C10	H1	179.9°	180.0°
C21	C09	C10	H2	0.1°	0.3°
C21	C09	C08	H9	152.8°	180.0°
C23	C21	C09	C08	37.4°	0.3°
C21	C23	C03	C06	179.5°	179.0°
C21	C23	C03	S04	179.7°	179.5°
C21	C23	C06	C07	0.4°	0.6°
C21	C23	C06	C05	180.0°	179.6°
C09	C08	C07	H9	180.0°	180.0°
C09	C08	C07	C06	4.9°	0.1°
C08	C09	C10	H1	0.0°	0.0°
C08	C09	C10	H2	180.0°	179.7°
C09	C08	C07	H8	175.1°	180.0°
C23	C03	S04	C05	0.0°	0.3°
C03	C23	C06	C07	179.9°	179.7°
C03	C23	C06	C05	0.5°	0.5°
S04	C03	C23	C06	0.3°	0.5°
C03	S04	C05	C06	0.3°	0.0°
C03	S04	C05	H7	179.7°	180.0°
C23	C06	C07	C08	9.1°	0.3°
C23	C06	C05	S04	0.5°	0.3°
C23	C06	C07	C05	179.5°	179.7°
C23	C06	C05	H7	179.5°	179.8°
C23	C06	C07	H8	170.9°	179.7°
C08	C07	C06	H8	180.0°	179.9°
C08	C07	C06	C05	171.4°	179.9°
S04	C05	C06	C07	180.0°	180.0°
S04	C05	C06	H7	180.0°	180.0°
C07	C06	C05	H7	0.0°	0.0°
C06	C07	C08	H9	175.1°	180.0°
C05	C06	C07	H8	8.6°	0.0°
H4	C01	H5	H6	120.0°	120.0°
H8	C07	C08	H9	4.9°	0.0°

226262

PDB entries from 2024-10-16

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