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6CX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C6sing1.38Å1.39Å
C6C5doub1.41Å1.39ÅAromatic
C6N1sing1.33Å1.35ÅAromatic
N7C5sing1.35Å1.36ÅAromatic
N7C8doub1.30Å1.32ÅAromatic
C5C4sing1.40Å1.39ÅAromatic
N1C2doub1.32Å1.33ÅAromatic
C8N9sing1.36Å1.35ÅAromatic
C2N3sing1.32Å1.32ÅAromatic
C4N9sing1.37Å1.35ÅAromatic
C4N3doub1.33Å1.35ÅAromatic
N9C1'sing1.46Å1.47Å
C54N53sing1.35Å1.40ÅAromatic
C54N55doub1.30Å1.34ÅAromatic
N53C52sing1.37Å1.38ÅAromatic
C1'C2'sing1.54Å1.49Å
C1'O4'sing1.44Å1.42Å
N55C51sing1.34Å1.28ÅAromatic
C2'O2'sing1.43Å1.42Å
C2'C3'sing1.54Å1.45Å
C52C51doub1.35Å1.34ÅAromatic
O4'C4'sing1.44Å1.38Å
C51C10sing1.51Å1.50Å
C5'C4'sing1.53Å1.51Å
C5'NDsing1.47Å1.48Å
C4'C3'sing1.55Å1.48Å
C3'O3'sing1.43Å1.41Å
C10NDsing1.47Å1.45Å
NDCGsing1.47Å1.47Å
CGCBsing1.53Å1.51Å
CBCAsing1.53Å1.56Å
NCAsing1.47Å1.44Å
CACsing1.51Å1.50Å
OCdoub1.21Å1.26Å
COXTsing1.34Å1.28Å
C2H21sing1.08Å1.08Å
C8H81sing1.08Å1.08Å
C10H102sing1.09Å1.10Å
C10H101sing1.09Å1.10Å
CGHG2sing1.09Å1.10Å
CGHG3sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CAHAsing1.09Å1.10Å
OXTH3sing0.97Å0.95Å
NH2sing1.01Å1.00Å
NHsing1.01Å1.00Å
C5'H5'2sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C4'H4'1sing1.09Å1.10Å
C3'H3'1sing1.09Å1.10Å
C2'H2'1sing1.09Å1.10Å
O2'H2'2sing0.97Å0.95Å
C1'H1'1sing1.09Å1.10Å
N6H61sing0.97Å1.00Å
N6H62sing0.97Å1.00Å
O3'H3'2sing0.97Å0.95Å
C52H521sing1.08Å1.08Å
N53H531sing0.97Å1.00Å
C54H541sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C6C5120.9°120.7°
N6C6N1119.8°120.8°
C6N6H61109.5°120.1°
C6N6H62109.4°119.9°
C5C6N1119.3°118.5°
C6C5N7133.7°134.7°
C6C5C4117.9°118.2°
C6N1C2121.0°121.2°
C5N7C8108.2°109.4°
N7C5C4108.4°107.1°
N7C8N9108.4°110.0°
N7C8H81125.8°125.0°
C5C4N9105.2°106.0°
C5C4N3119.7°119.1°
N1C2N3121.2°122.5°
N1C2H21119.4°118.8°
C8N9C4109.8°107.4°
C8N9C1'128.0°126.3°
N9C8H81125.8°125.0°
C2N3C4121.0°120.6°
N3C2H21119.4°118.7°
N9C4N3135.1°134.9°
C4N9C1'122.1°126.3°
N9C1'C2'117.7°110.4°
N9C1'O4'107.6°110.4°
N9C1'H1'1110.1°110.3°
N53C54N55112.3°108.7°
C54N53C5299.9°107.2°
C54N53H531130.1°126.4°
N53C54H541123.9°125.7°
C54N55C51106.8°109.2°
N55C54H541123.9°125.6°
N53C52C51110.8°106.8°
N53C52H521124.6°126.6°
C52N53H531130.0°126.4°
C2'C1'O4'100.3°104.8°
C1'C2'O2'112.0°110.5°
C1'C2'C3'104.5°104.1°
C1'C2'H2'1108.6°110.6°
C2'C1'H1'1109.8°110.4°
C1'O4'C4'109.2°105.3°
O4'C1'H1'1110.8°110.4°
N55C51C52110.2°108.0°
N55C51C10126.2°126.0°
O2'C2'C3'112.9°110.5°
O2'C2'H2'1109.6°110.5°
C2'O2'H2'2109.5°114.0°
C2'C3'C4'104.5°104.1°
C2'C3'O3'114.0°110.5°
C2'C3'H3'1109.9°110.6°
C3'C2'H2'1109.1°110.5°
C52C51C10123.6°126.0°
C51C52H521124.6°126.6°
O4'C4'C5'108.4°110.4°
O4'C4'C3'106.6°104.8°
O4'C4'H4'1111.1°110.5°
C51C10ND118.3°109.5°
C51C10H102107.2°109.5°
C51C10H101107.2°109.5°
C4'C5'ND122.8°109.5°
C5'C4'C3'111.7°110.4°
C4'C5'H5'2106.0°109.4°
C4'C5'H5'1106.0°109.5°
C5'C4'H4'1109.2°110.3°
C5'NDC10109.0°111.0°
C5'NDCG111.8°111.0°
NDC5'H5'2106.0°109.5°
NDC5'H5'1106.0°109.5°
C4'C3'O3'108.0°110.5°
C3'C4'H4'1109.8°110.3°
C4'C3'H3'1109.5°110.5°
O3'C3'H3'1110.6°110.5°
C3'O3'H3'2109.5°114.0°
C10NDCG106.8°111.0°
NDC10H102107.2°109.5°
NDC10H101107.2°109.4°
NDCGCB118.6°109.5°
NDCGHG2107.1°109.5°
NDCGHG3107.1°109.5°
CGCBCA119.2°109.5°
CBCGHG2107.2°109.4°
CBCGHG3107.1°109.5°
CGCBHB2107.0°109.5°
CGCBHB3107.0°109.4°
CBCAN105.9°109.5°
CBCAC107.3°109.5°
CACBHB2107.0°109.5°
CACBHB3107.0°109.5°
CBCAHA110.4°109.4°
NCAC109.3°109.5°
NCAHA112.3°109.4°
CANH2109.5°111.0°
CANH109.5°111.0°
CACO116.4°120.0°
CACOXT122.8°120.0°
CCAHA111.4°109.5°
OCOXT120.6°120.0°
COXTH3109.5°117.0°
H102C10H101109.5°109.4°
HG2CGHG3109.5°109.4°
HB2CBHB3109.5°109.5°
H2NH109.4°111.0°
H5'2C5'H5'1109.5°109.5°
H61N6H62109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C6C5N1178.0°179.2°
N6C6C5N72.4°0.8°
N6C6C5C4179.0°180.0°
N6C6N1C2178.6°179.7°
C6N6H61H62120.0°179.9°
C6C5N7C4178.7°179.3°
C6C5N7C8179.6°179.4°
C5C6N1C20.6°0.5°
C6C5C4N9179.1°179.5°
C6C5C4N30.4°0.5°
C5C6N6H61178.0°0.0°
C5C6N6H6258.0°180.0°
N1C6C5N7179.7°179.9°
N1C6C5C41.0°0.8°
C6N1C2N30.5°0.0°
C6N1C2H21179.6°179.7°
N1C6N6H610.0°179.2°
N1C6N6H62120.0°0.9°
C5N7C8N91.3°0.1°
N7C5C4N90.1°0.0°
N7C5C4N3179.4°180.0°
C5N7C8H81178.7°180.0°
C8N7C5C40.9°0.1°
N7C8N9H81180.0°180.0°
N7C8N9C41.3°0.1°
N7C8N9C1'177.7°180.0°
C5C4N9C80.7°0.0°
C5C4N3C20.6°0.0°
C5C4N9N3179.4°180.0°
C5C4N9C1'177.3°179.9°
N1C2N3H21180.0°179.7°
N1C2N3C41.1°0.3°
C8N9C4C1'176.7°179.9°
C8N9C4N3179.9°180.0°
C8N9C1'C2'47.9°95.1°
C8N9C1'O4'64.4°20.3°
C8N9C1'H1'1174.8°142.7°
C2N3C4N9179.9°180.0°
C4N9C1'C2'136.1°85.0°
C4N9C1'O4'111.6°159.6°
C4N9C8H81178.8°180.0°
C4N9C1'H1'19.2°37.2°
N3C4N9C1'3.3°0.0°
C4N3C2H21179.0°180.0°
N9C1'C2'O4'116.3°118.8°
N9C1'C2'H1'1127.0°122.2°
N9C1'O4'H1'1120.4°122.3°
N9C1'C2'O2'83.8°98.5°
N9C1'C2'C3'153.7°142.8°
N9C1'O4'C4'159.7°159.3°
C1'N9C8H812.4°0.1°
N9C1'C2'H2'137.4°24.1°
N53C54N55H541180.0°179.8°
C54N53C52H531180.0°180.0°
N53C54N55C510.4°0.4°
C54N53C52C510.3°0.0°
C54N53C52H521179.8°179.9°
N55C54N53C520.4°0.2°
C54N55C51C520.2°0.4°
C54N55C51C10179.6°179.8°
N55C54N53H531179.6°179.8°
N53C52C51N550.0°0.2°
N53C52C51H521180.0°179.9°
N53C52C51C10179.9°180.0°
C52N53C54H541179.6°180.0°
C2'C1'O4'H1'1116.0°118.9°
C1'C2'O2'C3'117.6°114.7°
C1'C2'O2'H2'1120.5°122.7°
C1'C2'C3'H2'1116.0°118.8°
C2'C1'O4'C4'36.0°40.5°
C1'C2'C3'C4'26.0°0.0°
C1'C2'C3'O3'91.7°118.6°
C1'C2'C3'H3'1143.5°118.7°
C1'C2'O2'H2'2180.0°176.1°
O4'C1'C2'O2'160.0°142.6°
O4'C1'C2'C3'37.5°24.0°
C1'O4'C4'C5'141.1°159.4°
C1'O4'C4'C3'20.7°40.5°
C1'O4'C4'H4'198.9°78.4°
O4'C1'C2'H2'178.9°94.7°
N55C51C52C10179.9°179.8°
N55C51C10ND143.8°85.5°
N55C51C10H10295.0°154.4°
N55C51C10H10122.6°34.5°
N55C51C52H521180.0°179.8°
C51N55C54H541179.6°179.9°
O2'C2'C3'H2'1122.1°122.6°
O2'C2'C3'C4'148.0°118.7°
O2'C2'C3'O3'30.2°0.0°
O2'C2'C3'H3'194.6°122.7°
O2'C2'C1'H1'143.3°23.7°
C2'C3'C4'O4'4.3°23.9°
C2'C3'C4'C5'113.9°142.8°
C2'C3'C4'O3'121.8°118.7°
C2'C3'C4'H3'1117.7°118.8°
C2'C3'O3'H3'1124.4°122.8°
C2'C3'C4'H4'1124.7°95.0°
C3'C2'O2'H2'262.4°61.5°
C3'C2'C1'H1'179.3°94.9°
C2'C3'O3'H3'2180.0°65.3°
C52C51C10ND36.4°94.7°
C52C51C10H10284.9°25.4°
C52C51C10H101157.6°145.3°
C51C52N53H531179.8°180.0°
O4'C4'C5'C3'117.1°115.4°
O4'C4'C5'H4'1121.2°122.4°
O4'C4'C5'ND177.4°69.6°
O4'C4'C3'H4'1120.4°118.9°
O4'C4'C3'O3'117.5°142.6°
O4'C4'C5'H5'260.8°50.4°
O4'C4'C5'H5'155.6°170.4°
O4'C4'C3'H3'1122.0°94.8°
C4'O4'C1'H1'179.9°78.4°
C51C10NDC5'63.1°160.4°
C51C10NDH102121.2°120.1°
C51C10NDH101121.2°120.0°
C51C10NDCG175.9°75.6°
C51C10H102H101116.0°120.0°
C10C51C52H5210.2°0.1°
C4'C5'NDH5'2121.8°120.0°
C4'C5'NDH5'1121.8°120.0°
C5'C4'C3'H4'1121.4°122.2°
C5'C4'C3'O3'124.3°98.5°
C4'C5'NDC10167.4°66.0°
C4'C5'NDCG49.5°170.0°
C4'C5'H5'2H5'1114.0°120.0°
C5'C4'C3'H3'13.8°24.0°
NDC5'C4'C3'65.5°175.0°
C5'NDC10CG121.0°124.0°
C5'NDCGCB65.6°71.5°
C5'NDC10H102175.6°40.3°
C5'NDC10H10158.1°79.6°
C5'NDCGHG255.7°168.5°
C5'NDCGHG3173.1°48.5°
NDC5'H5'2H5'1114.0°120.0°
NDC5'C4'H4'156.2°52.8°
C4'C3'O3'H3'1119.9°122.5°
C3'C4'C5'H5'256.4°65.0°
C3'C4'C5'H5'1172.7°55.0°
C4'C3'C2'H2'190.0°118.8°
C4'C3'O3'H3'264.3°180.0°
O3'C3'C4'H4'13.0°23.7°
O3'C3'C2'H2'1152.3°122.6°
C10NDCGCB53.6°164.5°
NDC10H102H101116.0°119.9°
C10NDCGHG2174.9°44.5°
C10NDCGHG367.7°75.5°
C10NDC5'H5'270.8°174.0°
C10NDC5'H5'145.5°54.0°
NDCGCBHG2121.3°120.1°
NDCGCBHG3121.3°120.0°
NDCGCBCA177.5°175.0°
CGNDC10H10254.6°164.3°
CGNDC10H10162.9°44.4°
NDCGHG2HG3115.8°120.0°
NDCGCBHB261.1°65.0°
NDCGCBHB356.2°55.0°
CGNDC5'H5'2171.3°50.0°
CGNDC5'H5'172.4°70.0°
CGCBCAHB2121.4°120.0°
CGCBCAHB3121.4°120.0°
CGCBCAN153.1°64.9°
CGCBCAC90.3°175.0°
CBCGHG2HG3115.9°119.9°
CGCBHB2HB3115.6°119.9°
CGCBCAHA31.3°55.0°
CBCANC115.3°120.0°
CBCANHA120.6°119.9°
CBCACHA120.9°120.0°
CBCACO76.1°100.1°
CBCACOXT97.5°80.0°
CACBCGHG256.2°54.9°
CACBCGHG361.2°65.0°
CACBHB2HB3115.6°120.0°
CBCANH2180.0°176.0°
CBCANH60.0°60.0°
NCACHA124.6°120.0°
NCACO38.3°20.0°
NCACOXT148.0°160.0°
NCACBHB285.6°175.0°
NCACBHB331.7°55.0°
CANH2H120.0°123.9°
CACOOXT173.8°179.9°
CCACBHB231.1°55.0°
CCACBHB3148.4°65.0°
CACOXTH3173.4°180.0°
CCANH264.7°63.9°
CCANH55.3°60.0°
OCCAHA162.9°140.0°
OCOXTH30.0°0.0°
OXTCCAHA23.4°40.0°
HG2CGCBHB2177.6°175.0°
HG2CGCBHB365.1°65.1°
HG3CGCBHB260.2°55.0°
HG3CGCBHB3177.5°175.0°
HB2CBCAHA152.6°65.0°
HB3CBCAHA90.1°175.0°
HACANH259.4°56.1°
HACANH179.4°180.0°
H5'2C5'C4'H4'1178.0°172.8°
H5'1C5'C4'H4'165.6°67.3°
H4'1C4'C3'H3'1117.5°146.3°
H3'1C3'C2'H2'127.5°0.1°
H3'1C3'O3'H3'255.6°57.5°
H2'1C2'O2'H2'259.4°61.1°
H2'1C2'C1'H1'1164.4°146.4°
H521C52N53H5310.2°0.1°
H531N53C54H5410.4°0.0°

225946

PDB entries from 2024-10-09

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