Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C26C25doub1.38Å1.39ÅAromatic
C26C21sing1.38Å1.39ÅAromatic
C25C24sing1.38Å1.38ÅAromatic
C20C21sing1.51Å1.51Å
C20N4sing1.47Å1.47Å
C21C22doub1.38Å1.39ÅAromatic
C24C23doub1.38Å1.38ÅAromatic
N4N5sing1.29Å1.34ÅAromatic
N4C19sing1.35Å1.34ÅAromatic
N5N6doub1.29Å1.31ÅAromatic
C22C23sing1.38Å1.39ÅAromatic
C19C18doub1.35Å1.36ÅAromatic
N6C18sing1.34Å1.36ÅAromatic
C18C17sing1.51Å1.49Å
C17O1sing1.43Å1.43Å
C15C14doub1.38Å1.38ÅAromatic
C15C16sing1.39Å1.39ÅAromatic
O1C16sing1.36Å1.37Å
C14C13sing1.38Å1.39ÅAromatic
C16C27doub1.39Å1.39ÅAromatic
C13C12doub1.38Å1.39ÅAromatic
C27C12sing1.38Å1.39ÅAromatic
C12C11sing1.51Å1.51Å
C11C10sing1.51Å1.50Å
C10S1sing1.76Å1.73ÅAromatic
C10C9doub1.33Å1.35ÅAromatic
S1C8sing1.71Å1.73ÅAromatic
C9N3sing1.32Å1.37ÅAromatic
OCdoub1.21Å1.23Å
C8N3doub1.30Å1.30ÅAromatic
C8N2sing1.39Å1.38Å
CN2sing1.35Å1.37Å
CC1sing1.51Å1.52Å
SC1sing1.81Å1.83Å
SC2sing1.76Å1.75Å
C2N1doub1.33Å1.34ÅAromatic
C2Nsing1.33Å1.34ÅAromatic
N1C6sing1.32Å1.34ÅAromatic
NC3doub1.32Å1.34ÅAromatic
C6C7sing1.51Å1.50Å
C6C5doub1.39Å1.39ÅAromatic
C3C5sing1.39Å1.38ÅAromatic
C3C4sing1.51Å1.50Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C9H3sing1.08Å1.08Å
C15H4sing1.08Å1.08Å
C27H5sing1.08Å1.08Å
C7H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C5H9sing1.08Å1.08Å
C4H10sing1.09Å1.10Å
C4H11sing1.09Å1.10Å
C4H12sing1.09Å1.10Å
N2H13sing0.97Å1.00Å
C11H14sing1.09Å1.10Å
C11H15sing1.09Å1.10Å
C14H16sing1.08Å1.08Å
C13H17sing1.08Å1.08Å
C17H18sing1.09Å1.10Å
C17H19sing1.09Å1.10Å
C19H20sing1.08Å1.08Å
C20H21sing1.09Å1.10Å
C20H22sing1.09Å1.10Å
C26H23sing1.08Å1.08Å
C25H24sing1.08Å1.08Å
C24H25sing1.08Å1.08Å
C23H26sing1.08Å1.08Å
C22H27sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C25C26C21120.8°120.0°
C26C25C24120.2°120.0°
C25C26H23119.6°120.0°
C26C25H24119.9°120.0°
C26C21C20120.9°120.0°
C26C21C22118.5°120.0°
C21C26H23119.6°120.0°
C25C24C23119.7°120.0°
C24C25H24119.9°120.0°
C25C24H25120.2°120.0°
C21C20N4112.9°109.5°
C20C21C22120.7°120.0°
C21C20H21108.6°109.4°
C21C20H22108.6°109.5°
C20N4N5120.3°125.8°
C20N4C19128.9°125.9°
N4C20H21108.6°109.5°
N4C20H22108.6°109.5°
C21C22C23120.8°120.0°
C21C22H27119.6°120.0°
C24C23C22120.2°120.0°
C23C24H25120.2°120.0°
C24C23H26119.9°120.0°
N5N4C19110.8°108.3°
N4N5N6107.0°110.2°
N4C19C18105.2°106.1°
N4C19H20127.4°126.9°
N5N6C18109.1°108.9°
C22C23H26119.9°120.0°
C23C22H27119.6°120.0°
C19C18N6107.9°106.5°
C19C18C17130.2°126.7°
C18C19H20127.4°127.0°
N6C18C17121.9°126.8°
C18C17O1107.1°109.5°
C18C17H18110.1°109.4°
C18C17H19110.1°109.4°
C17O1C16121.6°117.0°
O1C17H18110.0°109.5°
O1C17H19110.0°109.5°
C14C15C16118.9°119.9°
C15C14C13120.5°120.1°
C14C15H4120.6°120.1°
C15C14H16119.7°119.9°
C15C16O1129.4°120.0°
C15C16C27120.8°119.9°
C16C15H4120.6°120.0°
O1C16C27109.8°120.1°
C14C13C12120.9°120.1°
C13C14H16119.7°120.0°
C14C13H17119.6°120.0°
C16C27C12120.3°119.9°
C16C27H5119.9°120.1°
C13C12C27118.7°120.0°
C13C12C11120.7°120.0°
C12C13H17119.6°119.9°
C27C12C11120.6°120.0°
C12C27H5119.9°120.0°
C12C11C10115.4°109.5°
C12C11H14108.0°109.4°
C12C11H15107.9°109.4°
C11C10S1122.4°126.0°
C11C10C9128.6°126.0°
C10C11H14107.9°109.5°
C10C11H15108.0°109.5°
S1C10C9108.9°108.0°
C10S1C889.1°90.3°
C10C9N3117.2°114.6°
C10C9H3121.4°122.7°
S1C8N3115.2°110.2°
S1C8N2125.0°124.9°
C9N3C8109.6°116.9°
N3C9H3121.4°122.7°
OCN2123.5°120.0°
OCC1121.5°120.0°
N3C8N2119.8°124.9°
C8N2C124.8°120.0°
C8N2H13117.6°120.0°
N2CC1114.9°120.0°
CN2H13117.6°120.0°
CC1S123.9°109.5°
CC1H1105.8°109.4°
CC1H2105.8°109.4°
C1SC2102.1°100.0°
SC1H1105.8°109.5°
SC1H2105.8°109.5°
SC2N1111.1°119.2°
SC2N121.2°119.2°
N1C2N127.5°121.6°
C2N1C6115.7°120.8°
C2NC3115.6°120.7°
N1C6C7116.8°120.4°
N1C6C5121.2°119.2°
NC3C5121.3°119.3°
NC3C4116.7°120.4°
C7C6C5121.9°120.3°
C6C7H6109.5°109.4°
C6C7H7109.4°109.4°
C6C7H8109.5°109.4°
C6C5C3118.6°118.5°
C6C5H9120.7°120.8°
C5C3C4122.0°120.4°
C3C5H9120.7°120.7°
C3C4H10109.5°109.5°
C3C4H11109.4°109.5°
C3C4H12109.5°109.5°
H1C1H2109.5°109.5°
H6C7H7109.5°109.5°
H6C7H8109.5°109.5°
H7C7H8109.5°109.5°
H10C4H11109.5°109.5°
H10C4H12109.4°109.4°
H11C4H12109.5°109.5°
H14C11H15109.5°109.5°
H18C17H19109.5°109.5°
H21C20H22109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C25C26C21H23180.0°179.9°
C26C25C24H24180.0°179.9°
C25C26C21C20179.6°179.7°
C25C26C21C220.1°0.1°
C26C25C24C230.1°0.0°
C26C25C24H25179.9°179.9°
C21C26C25C240.1°0.1°
C26C21C20C22179.7°179.6°
C26C21C20N4118.3°89.7°
C26C21C22C230.2°0.0°
C26C21C20H212.2°30.3°
C26C21C20H22121.2°150.3°
C21C26C25H24180.0°179.9°
C26C21C22H27179.8°179.7°
C25C24C23H25180.0°179.9°
C25C24C23C220.1°0.1°
C24C25C26H23179.9°180.0°
C25C24C23H26179.9°180.0°
C21C20N4H21120.5°120.0°
C21C20N4H22120.5°120.0°
C21C20N4N550.3°55.0°
C21C20N4C19131.6°125.3°
C20C21C22C23179.5°179.6°
C21C20H21H22118.4°120.0°
C20C21C26H230.4°0.4°
C20C21C22H270.5°0.1°
N4C20C21C2261.4°90.0°
C20N4N5C19178.4°179.7°
C20N4N5N6178.1°180.0°
C20N4C19C18178.0°179.8°
C20N4C19H202.0°0.3°
N4C20H21H22118.4°120.0°
C21C22C23C240.2°0.1°
C21C22C23H27180.0°179.7°
C22C21C20H21178.0°150.0°
C22C21C20H2259.1°30.1°
C22C21C26H23179.9°180.0°
C21C22C23H26179.8°180.0°
C24C23C22H26180.0°179.9°
C23C24C25H24180.0°179.9°
C24C23C22H27179.8°179.8°
N5N4C19C180.3°0.5°
N4N5N6C180.3°0.0°
N5N4C19H20179.8°180.0°
N5N4C20H2170.2°175.0°
N5N4C20H22170.8°65.0°
C19N4N5N60.4°0.3°
N4C19C18H20180.0°179.5°
N4C19C18N60.1°0.5°
N4C19C18C17177.6°179.8°
C19N4C20H21107.9°5.4°
C19N4C20H2211.0°114.7°
N5N6C18C190.2°0.3°
N5N6C18C17177.7°180.0°
C22C23C24H25179.9°179.9°
C19C18N6C17177.8°179.7°
C19C18C17O186.1°0.3°
C19C18C17H18154.3°119.7°
C19C18C17H1933.5°120.3°
N6C18C17O191.2°179.9°
N6C18C17H1828.4°59.9°
N6C18C17H19149.2°60.0°
N6C18C19H20180.0°180.0°
C18C17O1H18119.6°120.0°
C18C17O1H19119.6°120.0°
C18C17O1C1682.6°180.0°
C18C17H18H19121.1°119.9°
C17C18C19H202.4°0.3°
C17O1C16C155.8°0.0°
C17O1C16C27171.2°179.9°
O1C17H18H19121.1°120.1°
C14C15C16H4180.0°179.7°
C14C15C16O1178.0°179.7°
C15C14C13H16180.0°179.6°
C14C15C16C271.2°0.4°
C15C14C13C120.4°0.0°
C15C14C13H17179.6°179.9°
C15C16O1C27177.1°179.9°
C16C15C14C130.8°0.3°
C15C16C27C120.4°0.1°
C15C16C27H5179.6°179.9°
C16C15C14H16179.2°180.0°
O1C16C27C12177.8°180.0°
O1C16C15H42.0°0.1°
O1C16C27H52.2°0.1°
C16O1C17H18157.8°60.0°
C16O1C17H1937.1°60.0°
C14C13C12H17180.0°180.0°
C14C13C12C271.2°0.3°
C14C13C12C11176.3°180.0°
C13C14C15H4179.2°180.0°
C16C27C12C130.8°0.2°
C16C27C12H5180.0°179.9°
C16C27C12C11176.8°179.9°
C27C16C15H4178.8°180.0°
C13C12C27C11177.5°179.7°
C13C12C11C10139.2°89.7°
C13C12C27H5179.2°179.6°
C13C12C11H1418.4°30.3°
C13C12C11H1599.9°150.3°
C12C13C14H16179.6°179.7°
C27C12C11C1043.3°90.0°
C27C12C11H14164.1°150.0°
C27C12C11H1577.6°30.0°
C27C12C13H17178.8°179.8°
C12C11C10H14120.9°120.0°
C12C11C10H15120.9°120.0°
C12C11C10S193.2°90.0°
C12C11C10C986.3°90.0°
C11C12C27H53.3°0.1°
C12C11H14H15117.3°119.9°
C11C12C13H173.7°0.1°
C11C10S1C9179.6°180.0°
C11C10S1C8179.3°179.8°
C11C10C9N3179.3°180.0°
C11C10C9H30.7°0.3°
C10C11H14H15117.3°120.1°
S1C10C9N30.3°0.0°
C10S1C8N30.3°0.3°
C10S1C8N2179.6°179.9°
S1C10C9H3179.7°179.7°
S1C10C11H14145.9°150.0°
S1C10C11H1527.7°30.0°
C9C10S1C80.3°0.2°
C10C9N3H3180.0°179.7°
C10C9N3C80.1°0.2°
C9C10C11H1434.6°30.0°
C9C10C11H15152.9°150.0°
S1C8N3C90.2°0.4°
S1C8N3N2179.9°179.7°
S1C8N2C0.1°179.6°
S1C8N2H13179.9°0.5°
C9N3C8N2179.7°180.0°
OCN2C814.0°0.0°
OCN2C1176.7°180.0°
OCC1S111.8°0.0°
OCC1H1126.3°120.0°
OCC1H210.2°120.0°
OCN2H13166.0°180.0°
N3C8N2C179.8°0.0°
C8N3C9H3179.9°180.0°
N3C8N2H130.2°179.9°
C8N2CH13180.0°180.0°
C8N2CC1169.3°180.0°
N2CC1S71.5°180.0°
N2CC1H150.5°60.0°
N2CC1H2166.6°60.0°
CC1SH1122.0°120.0°
CC1SH2122.0°120.0°
CC1SC276.6°180.0°
CC1H1H2113.5°119.9°
C1CN2H1310.7°0.0°
C1SC2N1169.0°180.0°
C1SC2N6.1°0.3°
SC1H1H2113.5°120.0°
SC2N1N174.7°179.7°
SC2N1C6174.2°179.7°
SC2NC3175.1°179.8°
C2SC1H145.4°60.0°
C2SC1H2161.4°60.0°
N1C2NC30.9°0.0°
C2N1C6C7177.7°180.0°
C2N1C6C51.3°0.0°
NC2N1C60.6°0.0°
C2NC3C51.6°0.1°
C2NC3C4176.3°180.0°
N1C6C7C5179.0°180.0°
N1C6C5C30.6°0.0°
N1C6C7H60.0°90.0°
N1C6C7H7120.0°30.0°
N1C6C7H8120.0°149.9°
N1C6C5H9179.4°180.0°
NC3C5C60.9°0.1°
NC3C5C4177.8°179.9°
NC3C5H9179.1°180.0°
NC3C4H100.0°90.0°
NC3C4H11120.0°30.1°
NC3C4H12120.0°150.1°
C7C6C5C3178.3°180.0°
C6C7H6H7120.0°119.9°
C6C7H6H8120.0°120.0°
C6C7H7H8120.0°119.9°
C7C6C5H91.7°0.1°
C6C5C3H9180.0°179.9°
C6C5C3C4176.9°180.0°
C5C6C7H6179.0°90.0°
C5C6C7H761.0°150.0°
C5C6C7H858.9°30.0°
C5C3C4H10177.9°90.0°
C5C3C4H1162.1°150.0°
C5C3C4H1257.9°30.0°
C4C3C5H93.1°0.1°
C3C4H10H11120.0°120.0°
C3C4H10H12120.0°120.0°
C3C4H11H12120.0°120.0°
H4C15C14H160.8°0.4°
H6C7H7H8120.0°120.1°
H10C4H11H12120.0°120.0°
H16C14C13H170.4°0.3°
H23C26C25H240.0°0.1°
H24C25C24H250.0°0.0°
H25C24C23H260.1°0.0°
H26C23C22H270.2°0.3°

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon