Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5E3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAZOAYsing1.43Å1.44Å
CASCATdoub1.38Å1.39ÅAromatic
CASCARsing1.39Å1.42ÅAromatic
CATCAUsing1.38Å1.38ÅAromatic
OAYCARsing1.36Å1.41Å
CARCAQdoub1.39Å1.39ÅAromatic
CAUCAVdoub1.38Å1.39ÅAromatic
CAXOAMsing1.43Å1.42Å
CAQCAVsing1.38Å1.39ÅAromatic
CAQSANsing1.76Å1.78Å
OAMCABsing1.36Å1.39Å
OAPSANdoub1.42Å1.49Å
CABCACdoub1.38Å1.37ÅAromatic
CABCAAsing1.40Å1.40ÅAromatic
SANNALsing1.66Å1.70Å
SANOAOdoub1.42Å1.49Å
CACCADsing1.39Å1.33ÅAromatic
NALCAAsing1.40Å1.39Å
CAACAFdoub1.38Å1.39ÅAromatic
CADOAGsing1.35Å1.38ÅAromatic
CADCAEdoub1.40Å1.36ÅAromatic
CAFCAEsing1.40Å1.38ÅAromatic
OAGNAHsing1.41Å1.45ÅAromatic
CAECAIsing1.46Å1.34ÅAromatic
NAHCAIdoub1.30Å1.34ÅAromatic
CAICAJsing1.51Å1.49Å
CAJCAKsing1.53Å1.55Å
CAXH1sing1.09Å1.10Å
CAXH2sing1.09Å1.10Å
CAXH3sing1.09Å1.10Å
CACH4sing1.08Å1.08Å
CAJH5sing1.09Å1.10Å
CAJH6sing1.09Å1.10Å
CAKH7sing1.09Å1.10Å
CAKH8sing1.09Å1.10Å
CAKH9sing1.09Å1.10Å
CAFH10sing1.08Å1.08Å
NALH11sing0.97Å1.00Å
CAVH12sing1.08Å1.08Å
CAUH13sing1.08Å1.08Å
CATH14sing1.08Å1.08Å
CASH15sing1.08Å1.08Å
CAZH16sing1.09Å1.10Å
CAZH17sing1.09Å1.10Å
CAZH18sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAZOAYCAR121.9°117.0°
OAYCAZH16109.5°109.5°
OAYCAZH17109.4°109.4°
OAYCAZH18109.5°109.5°
CATCASCAR121.0°120.0°
CASCATCAU118.5°120.0°
CASCATH14120.8°119.9°
CATCASH15119.5°120.0°
CASCAROAY126.4°120.1°
CASCARCAQ118.6°119.8°
CARCASH15119.5°120.0°
CATCAUCAV121.3°120.1°
CATCAUH13119.4°119.9°
CAUCATH14120.8°120.0°
OAYCARCAQ114.9°120.1°
CARCAQCAV120.2°120.0°
CARCAQSAN121.3°120.0°
CAUCAVCAQ120.2°120.1°
CAUCAVH12119.9°120.0°
CAVCAUH13119.3°119.9°
CAXOAMCAB113.9°117.0°
OAMCAXH1109.5°109.4°
OAMCAXH2109.4°109.4°
OAMCAXH3109.4°109.5°
CAVCAQSAN118.4°120.0°
CAQCAVH12119.9°120.0°
CAQSANOAP107.8°106.4°
CAQSANNAL104.7°107.2°
CAQSANOAO111.7°106.4°
OAMCABCAC123.7°119.8°
OAMCABCAA114.0°119.8°
OAPSANNAL113.4°106.4°
OAPSANOAO108.2°123.2°
CACCABCAA122.2°120.4°
CABCACCAD119.1°120.0°
CABCACH4120.4°120.0°
CABCAANAL114.5°119.9°
CABCAACAF117.4°120.2°
NALSANOAO111.0°106.4°
SANNALCAA119.7°120.0°
SANNALH11106.9°120.0°
CACCADOAG128.2°133.2°
CACCADCAE120.2°119.7°
CADCACH4120.4°120.0°
NALCAACAF128.1°120.0°
CAANALH11106.8°120.0°
CAACAFCAE118.5°119.7°
CAACAFH10120.7°120.1°
OAGCADCAE111.4°107.1°
CADOAGNAH103.8°109.3°
CADCAECAF122.4°120.0°
CADCAECAI105.6°106.5°
CAFCAECAI131.9°133.5°
CAECAFH10120.7°120.2°
OAGNAHCAI106.1°109.8°
CAECAINAH112.9°107.4°
CAECAICAJ125.9°126.3°
NAHCAICAJ121.2°126.3°
CAICAJCAK106.3°109.4°
CAICAJH5110.3°109.5°
CAICAJH6110.3°109.4°
CAKCAJH5110.2°109.5°
CAKCAJH6110.2°109.5°
CAJCAKH7109.5°109.5°
CAJCAKH8109.5°109.5°
CAJCAKH9109.5°109.5°
H1CAXH2109.5°109.5°
H1CAXH3109.5°109.5°
H2CAXH3109.5°109.5°
H5CAJH6109.5°109.5°
H7CAKH8109.5°109.4°
H7CAKH9109.5°109.5°
H8CAKH9109.5°109.4°
H16CAZH17109.5°109.5°
H16CAZH18109.5°109.5°
H17CAZH18109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAZOAYCARCAS3.6°0.0°
CAZOAYCARCAQ179.0°179.5°
OAYCAZH16H17120.0°120.0°
OAYCAZH16H18120.0°120.0°
OAYCAZH17H18120.0°120.0°
CATCASCARH15180.0°179.8°
CASCATCAUH14180.0°180.0°
CATCASCAROAY175.9°180.0°
CATCASCARCAQ1.4°0.5°
CASCATCAUCAV4.0°0.0°
CASCATCAUH13176.0°180.0°
CARCASCATCAU1.1°0.3°
CASCAROAYCAQ177.4°179.5°
CASCARCAQCAV1.0°0.6°
CASCARCAQSAN178.7°179.8°
CARCASCATH14179.0°179.7°
CATCAUCAVH13180.0°180.0°
CATCAUCAVCAQ4.5°0.1°
CATCAUCAVH12175.5°180.0°
CAUCATCASH15178.9°180.0°
OAYCARCAQCAV176.6°180.0°
OAYCARCAQSAN3.7°0.3°
OAYCARCASH154.1°0.2°
CAROAYCAZH16180.0°180.0°
CAROAYCAZH1760.0°60.0°
CAROAYCAZH1860.0°60.0°
CARCAQCAVCAU1.9°0.3°
CARCAQCAVSAN179.7°179.7°
CARCAQSANOAP64.6°48.7°
CARCAQSANNAL56.4°64.7°
CARCAQSANOAO176.7°178.3°
CARCAQCAVH12178.1°179.8°
CAQCARCASH15178.6°179.7°
CAUCAVCAQH12180.0°179.9°
CAUCAVCAQSAN178.4°180.0°
CAVCAUCATH14176.0°179.9°
CAXOAMCABCAC32.2°0.0°
CAXOAMCABCAA151.0°179.7°
OAMCAXH1H2120.0°119.9°
OAMCAXH1H3120.0°120.0°
OAMCAXH2H3120.0°120.0°
CAVCAQSANOAP115.7°130.9°
CAVCAQSANNAL123.3°115.6°
CAVCAQSANOAO3.1°2.0°
CAQCAVCAUH13175.5°180.0°
CAQSANOAPNAL115.4°114.0°
CAQSANOAPOAO120.9°123.0°
CAQSANNALOAO120.7°113.6°
CAQSANNALCAA64.9°60.3°
CAQSANNALH11173.6°119.8°
SANCAQCAVH121.6°0.1°
OAMCABCACCAA176.6°179.7°
OAMCABCACCAD176.3°180.0°
OAMCABCAANAL0.3°0.0°
OAMCABCAACAF179.3°179.8°
CABOAMCAXH1180.0°60.0°
CABOAMCAXH260.0°60.0°
CABOAMCAXH360.0°180.0°
OAMCABCACH43.6°0.1°
OAPSANNALOAO122.1°133.0°
OAPSANNALCAA177.9°173.8°
OAPSANNALH1156.5°6.3°
CABCACCADH4180.0°179.9°
CACCABCAANAL177.2°179.7°
CACCABCAACAF2.4°0.5°
CABCACCADOAG177.7°180.0°
CABCACCADCAE3.9°0.0°
CABCAANALSAN135.3°144.3°
CAACABCACCAD0.2°0.3°
CABCAANALCAF179.5°179.7°
CABCAACAFCAE1.3°0.5°
CAACABCACH4179.8°179.8°
CABCAACAFH10178.7°179.7°
CABCAANALH11103.3°35.7°
SANNALCAAH11121.4°179.9°
SANNALCAACAF45.3°35.4°
OAOSANNALCAA55.7°53.3°
OAOSANNALH1165.7°126.7°
CACCADOAGCAE174.3°180.0°
CACCADCAECAF5.0°0.0°
CACCADOAGNAH176.8°180.0°
CACCADCAECAI175.7°180.0°
NALCAACAFCAE178.1°179.7°
NALCAACAFH101.9°0.0°
CAACAFCAECAD2.3°0.2°
CAACAFCAEH10180.0°179.8°
CAACAFCAECAI178.6°179.7°
CAFCAANALH1176.2°144.5°
OAGCADCAECAF179.8°180.0°
OAGCADCAECAI0.9°0.0°
CADOAGNAHCAI3.2°0.0°
OAGCADCACH42.3°0.1°
CADCAECAFCAI179.1°180.0°
CAECADOAGNAH2.5°0.0°
CADCAECAINAH1.4°0.0°
CADCAECAICAJ178.3°180.0°
CAECADCACH4176.1°180.0°
CADCAECAFH10177.7°180.0°
CAFCAECAINAH177.8°180.0°
CAFCAECAICAJ0.9°0.1°
OAGNAHCAICAE2.9°0.0°
OAGNAHCAICAJ180.0°180.0°
CAECAINAHCAJ177.1°180.0°
CAECAICAJCAK175.6°90.1°
CAECAICAJH556.1°29.9°
CAECAICAJH664.9°149.9°
CAICAECAFH101.4°0.0°
NAHCAICAJCAK7.7°90.0°
NAHCAICAJH5127.2°150.0°
NAHCAICAJH6111.8°30.0°
CAICAJCAKH5119.5°120.0°
CAICAJCAKH6119.5°120.0°
CAICAJH5H6121.5°120.0°
CAICAJCAKH7180.0°60.1°
CAICAJCAKH860.0°180.0°
CAICAJCAKH960.0°60.0°
CAKCAJH5H6121.4°120.1°
CAJCAKH7H8120.0°120.0°
CAJCAKH7H9120.0°120.1°
CAJCAKH8H9120.0°120.0°
H1CAXH2H3120.0°120.1°
H5CAJCAKH760.5°59.9°
H5CAJCAKH8179.5°60.0°
H5CAJCAKH959.5°180.0°
H6CAJCAKH760.5°180.0°
H6CAJCAKH859.5°60.0°
H6CAJCAKH9179.5°59.9°
H7CAKH8H9120.0°120.0°
H12CAVCAUH134.5°0.0°
H13CAUCATH144.0°0.0°
H14CATCASH151.1°0.1°
H16CAZH17H18120.0°120.0°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon